data_2KSQ
#
_model_server_result.job_id            YMo2LPd_nftKT8qm-5ZffQ 
_model_server_result.datetime_utc      '2024-11-21 14:12:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2ksq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":186}' 
#
_entry.id    2KSQ 
#
_exptl.entry_id    2KSQ 
_exptl.method      'SOLUTION NMR' 
#
_entity.details                     ? 
_entity.formula_weight              264.385 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C1 MYR 1 A MYR 1 1_555 A N GLY 2 A GLY 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale2 A SG CYS 55 A CYS 55 1_555 B S1 MTN . A MTN 182 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.03 ? 
covale ? covale3 A SG CYS 55 A CYS 55 1_555 B S1 MTN . A MTN 182 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.03 ? 
covale ? covale4 A SG CYS 55 A CYS 55 1_555 B S1 MTN . A MTN 182 1_555 ? ? ? ? C ? ? ? ? ? ? ? 2.032 ? 
covale ? covale5 A SG CYS 59 A CYS 59 1_555 C S1 MTN . A MTN 183 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.029 ? 
covale ? covale6 A SG CYS 59 A CYS 59 1_555 C S1 MTN . A MTN 183 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.028 ? 
covale ? covale7 A SG CYS 59 A CYS 59 1_555 C S1 MTN . A MTN 183 1_555 ? ? ? ? C ? ? ? ? ? ? ? 2.03 ? 
covale ? covale8 A SG CYS 83 A CYS 83 1_555 D S1 MTN . A MTN 184 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.03 ? 
covale ? covale9 A SG CYS 83 A CYS 83 1_555 D S1 MTN . A MTN 184 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.03 ? 
covale ? covale10 A SG CYS 83 A CYS 83 1_555 D S1 MTN . A MTN 184 1_555 ? ? ? ? C ? ? ? ? ? ? ? 2.031 ? 
covale ? covale11 A SG CYS 117 A CYS 117 1_555 E S1 MTN . A MTN 185 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.03 ? 
covale ? covale12 A SG CYS 117 A CYS 117 1_555 E S1 MTN . A MTN 185 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.03 ? 
covale ? covale13 A SG CYS 117 A CYS 117 1_555 E S1 MTN . A MTN 185 1_555 ? ? ? ? C ? ? ? ? ? ? ? 2.029 ? 
covale ? covale14 A SG CYS 176 A CYS 176 1_555 F S1 MTN . A MTN 186 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.029 ? 
covale ? covale15 A SG CYS 176 A CYS 176 1_555 F S1 MTN . A MTN 186 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.03 ? 
covale ? covale16 A SG CYS 176 A CYS 176 1_555 F S1 MTN . A MTN 186 1_555 ? ? ? ? C ? ? ? ? ? ? ? 2.029 ? 
#
_chem_comp.formula           'C10 H18 N O3 S2' 
_chem_comp.formula_weight    264.385 
_chem_comp.id                MTN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     MTSL 
#
_atom_sites.entry_id                     2KSQ 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MTN A 1 182 55 MTN MTN . 
C 2 MTN A 1 183 59 MTN MTN . 
D 2 MTN A 1 184 83 MTN MTN . 
E 2 MTN A 1 185 117 MTN MTN . 
F 2 MTN A 1 186 176 MTN MTN . 
G 3 GTP A 1 187 182 GTP GTP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 MTN . A . F 2 1.795 -16.812 -9.629 1 0 ? O1 MTN 186 A 1 
HETATM 2 O O1 MTN . B . F 2 4.896 -16.282 -10.375 1 0 ? O1 MTN 186 A 1 
HETATM 3 O O1 MTN . C . F 2 -1.345 -16.744 -8.178 1 0 ? O1 MTN 186 A 1 
HETATM 4 N N1 MTN . A . F 2 0.751 -16.008 -9.576 1 0 ? N1 MTN 186 A 1 
HETATM 5 N N1 MTN . B . F 2 3.92 -15.633 -9.773 1 0 ? N1 MTN 186 A 1 
HETATM 6 N N1 MTN . C . F 2 -0.365 -15.964 -8.585 1 0 ? N1 MTN 186 A 1 
HETATM 7 C C1 MTN . A . F 2 0.23 -16.025 -8.209 1 0 ? C1 MTN 186 A 1 
HETATM 8 C C1 MTN . B . F 2 4.182 -15.64 -8.334 1 0 ? C1 MTN 186 A 1 
HETATM 9 C C1 MTN . C . F 2 -0.907 -15.023 -9.563 1 0 ? C1 MTN 186 A 1 
HETATM 10 C C2 MTN . A . F 2 0.704 -14.739 -7.588 1 0 ? C2 MTN 186 A 1 
HETATM 11 C C2 MTN . B . F 2 3.644 -14.329 -7.825 1 0 ? C2 MTN 186 A 1 
HETATM 12 C C2 MTN . C . F 2 -0.124 -13.75 -9.367 1 0 ? C2 MTN 186 A 1 
HETATM 13 C C3 MTN . A . F 2 1.161 -13.91 -8.533 1 0 ? C3 MTN 186 A 1 
HETATM 14 C C3 MTN . B . F 2 3.392 -13.507 -8.849 1 0 ? C3 MTN 186 A 1 
HETATM 15 C C3 MTN . C . F 2 0.558 -13.804 -8.218 1 0 ? C3 MTN 186 A 1 
HETATM 16 C C4 MTN . A . F 2 2.207 -12.811 -8.343 1 0 ? C4 MTN 186 A 1 
HETATM 17 C C4 MTN . B . F 2 3.385 -11.978 -8.792 1 0 ? C4 MTN 186 A 1 
HETATM 18 C C4 MTN . C . F 2 1.858 -13.059 -7.907 1 0 ? C4 MTN 186 A 1 
HETATM 19 S S1 MTN . A . F 2 2.365 -12.343 -6.581 1 0 ? S1 MTN 186 A 1 
HETATM 20 S S1 MTN . B . F 2 1.741 -11.338 -8.307 1 0 ? S1 MTN 186 A 1 
HETATM 21 S S1 MTN . C . F 2 1.724 -11.283 -8.333 1 0 ? S1 MTN 186 A 1 
HETATM 22 C C5 MTN . A . F 2 1.008 -14.594 -9.878 1 0 ? C5 MTN 186 A 1 
HETATM 23 C C5 MTN . B . F 2 3.765 -14.217 -10.133 1 0 ? C5 MTN 186 A 1 
HETATM 24 C C5 MTN . C . F 2 0.267 -15.134 -7.552 1 0 ? C5 MTN 186 A 1 
HETATM 25 C C6 MTN . A . F 2 -0.196 -14.048 -10.649 1 0 ? C6 MTN 186 A 1 
HETATM 26 C C6 MTN . B . F 2 2.648 -14.112 -11.173 1 0 ? C6 MTN 186 A 1 
HETATM 27 C C6 MTN . C . F 2 -0.727 -14.972 -6.399 1 0 ? C6 MTN 186 A 1 
HETATM 28 C C7 MTN . A . F 2 2.276 -14.37 -10.705 1 0 ? C7 MTN 186 A 1 
HETATM 29 C C7 MTN . B . F 2 5.041 -13.592 -10.704 1 0 ? C7 MTN 186 A 1 
HETATM 30 C C7 MTN . C . F 2 1.572 -15.722 -7.012 1 0 ? C7 MTN 186 A 1 
HETATM 31 C C8 MTN . A . F 2 0.751 -17.189 -7.364 1 0 ? C8 MTN 186 A 1 
HETATM 32 C C8 MTN . B . F 2 3.481 -16.773 -7.583 1 0 ? C8 MTN 186 A 1 
HETATM 33 C C8 MTN . C . F 2 -0.737 -15.473 -11.015 1 0 ? C8 MTN 186 A 1 
HETATM 34 C C9 MTN . A . F 2 -1.299 -16.061 -8.251 1 0 ? C9 MTN 186 A 1 
HETATM 35 C C9 MTN . B . F 2 5.691 -15.722 -8.097 1 0 ? C9 MTN 186 A 1 
HETATM 36 C C9 MTN . C . F 2 -2.391 -14.783 -9.268 1 0 ? C9 MTN 186 A 1 
HETATM 37 H H2 MTN . A . F 2 0.62 -14.468 -6.629 1 0 ? H2 MTN 186 A 1 
HETATM 38 H H2 MTN . B . F 2 3.403 -14.107 -6.881 1 0 ? H2 MTN 186 A 1 
HETATM 39 H H2 MTN . C . F 2 -0.022 -13.001 -10.02 1 0 ? H2 MTN 186 A 1 
HETATM 40 H H41 MTN . A . F 2 3.171 -13.157 -8.692 1 0 ? H41 MTN 186 A 1 
HETATM 41 H H41 MTN . B . F 2 4.112 -11.635 -8.067 1 0 ? H41 MTN 186 A 1 
HETATM 42 H H41 MTN . C . F 2 2.084 -13.14 -6.852 1 0 ? H41 MTN 186 A 1 
HETATM 43 H H42 MTN . A . F 2 1.909 -11.94 -8.904 1 0 ? H42 MTN 186 A 1 
HETATM 44 H H42 MTN . B . F 2 3.631 -11.59 -9.766 1 0 ? H42 MTN 186 A 1 
HETATM 45 H H42 MTN . C . F 2 2.658 -13.491 -8.485 1 0 ? H42 MTN 186 A 1 
HETATM 46 H H61 MTN . A . F 2 -0.939 -14.824 -10.753 1 0 ? H61 MTN 186 A 1 
HETATM 47 H H61 MTN . B . F 2 2.898 -13.347 -11.894 1 0 ? H61 MTN 186 A 1 
HETATM 48 H H61 MTN . C . F 2 -0.779 -13.934 -6.111 1 0 ? H61 MTN 186 A 1 
HETATM 49 H H62 MTN . A . F 2 0.123 -13.72 -11.627 1 0 ? H62 MTN 186 A 1 
HETATM 50 H H62 MTN . B . F 2 1.723 -13.853 -10.681 1 0 ? H62 MTN 186 A 1 
HETATM 51 H H62 MTN . C . F 2 -0.399 -15.564 -5.556 1 0 ? H62 MTN 186 A 1 
HETATM 52 H H63 MTN . A . F 2 -0.62 -13.214 -10.109 1 0 ? H63 MTN 186 A 1 
HETATM 53 H H63 MTN . B . F 2 2.536 -15.06 -11.678 1 0 ? H63 MTN 186 A 1 
HETATM 54 H H63 MTN . C . F 2 -1.703 -15.309 -6.716 1 0 ? H63 MTN 186 A 1 
HETATM 55 H H71 MTN . A . F 2 2.021 -14.33 -11.754 1 0 ? H71 MTN 186 A 1 
HETATM 56 H H71 MTN . B . F 2 4.885 -13.34 -11.742 1 0 ? H71 MTN 186 A 1 
HETATM 57 H H71 MTN . C . F 2 1.857 -16.575 -7.611 1 0 ? H71 MTN 186 A 1 
HETATM 58 H H72 MTN . A . F 2 2.966 -15.183 -10.535 1 0 ? H72 MTN 186 A 1 
HETATM 59 H H72 MTN . B . F 2 5.855 -14.299 -10.622 1 0 ? H72 MTN 186 A 1 
HETATM 60 H H72 MTN . C . F 2 1.43 -16.033 -5.989 1 0 ? H72 MTN 186 A 1 
HETATM 61 H H73 MTN . A . F 2 2.738 -13.439 -10.41 1 0 ? H73 MTN 186 A 1 
HETATM 62 H H73 MTN . B . F 2 5.284 -12.699 -10.147 1 0 ? H73 MTN 186 A 1 
HETATM 63 H H73 MTN . C . F 2 2.35 -14.974 -7.056 1 0 ? H73 MTN 186 A 1 
HETATM 64 H H81 MTN . A . F 2 1.501 -16.827 -6.676 1 0 ? H81 MTN 186 A 1 
HETATM 65 H H81 MTN . B . F 2 2.659 -16.371 -7.01 1 0 ? H81 MTN 186 A 1 
HETATM 66 H H81 MTN . C . F 2 -1.43 -14.931 -11.644 1 0 ? H81 MTN 186 A 1 
HETATM 67 H H82 MTN . A . F 2 1.187 -17.937 -8.009 1 0 ? H82 MTN 186 A 1 
HETATM 68 H H82 MTN . B . F 2 4.183 -17.253 -6.916 1 0 ? H82 MTN 186 A 1 
HETATM 69 H H82 MTN . C . F 2 -0.935 -16.531 -11.09 1 0 ? H82 MTN 186 A 1 
HETATM 70 H H83 MTN . A . F 2 -0.067 -17.624 -6.81 1 0 ? H83 MTN 186 A 1 
HETATM 71 H H83 MTN . B . F 2 3.106 -17.497 -8.292 1 0 ? H83 MTN 186 A 1 
HETATM 72 H H83 MTN . C . F 2 0.273 -15.272 -11.339 1 0 ? H83 MTN 186 A 1 
HETATM 73 H H91 MTN . A . F 2 -1.633 -15.939 -9.27 1 0 ? H91 MTN 186 A 1 
HETATM 74 H H91 MTN . B . F 2 5.919 -16.609 -7.524 1 0 ? H91 MTN 186 A 1 
HETATM 75 H H91 MTN . C . F 2 -2.8 -15.646 -8.764 1 0 ? H91 MTN 186 A 1 
HETATM 76 H H92 MTN . A . F 2 -1.695 -15.262 -7.644 1 0 ? H92 MTN 186 A 1 
HETATM 77 H H92 MTN . B . F 2 6.018 -14.848 -7.55 1 0 ? H92 MTN 186 A 1 
HETATM 78 H H92 MTN . C . F 2 -2.919 -14.622 -10.195 1 0 ? H92 MTN 186 A 1 
HETATM 79 H H93 MTN . A . F 2 -1.647 -17.009 -7.867 1 0 ? H93 MTN 186 A 1 
HETATM 80 H H93 MTN . B . F 2 6.204 -15.762 -9.047 1 0 ? H93 MTN 186 A 1 
HETATM 81 H H93 MTN . C . F 2 -2.494 -13.913 -8.637 1 0 ? H93 MTN 186 A 1 
#
_model_server_stats.io_time_ms              33 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    71 
_model_server_stats.query_time_ms           5490 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           81 
#