data_2KZM
#
_model_server_result.job_id            KRL5Lktht6_a4qRV8PGBAw 
_model_server_result.datetime_utc      '2024-10-19 19:34:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2kzm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":2}' 
#
_entry.id    2KZM 
#
_exptl.entry_id    2KZM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2KZM 
_cell.length_a            102.6 
_cell.length_b            102.6 
_cell.length_c            86.2 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2KZM 
_symmetry.cell_setting             tetragonal 
_symmetry.Int_Tables_number        78 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 43' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 C MN MN . B MN 2 1_555 A O3' DG 7 B DG 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.632 ? 
metalc ? metalc2 C MN MN . B MN 2 1_555 A OP1 DC 8 B DC 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? 
metalc ? metalc3 C MN MN . B MN 2 1_555 B OD1 ASP 32 A ASP 355 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? 
metalc ? metalc4 A OP1 DC 8 B DC 1008 1_555 D ZN ZN . A ZN 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
metalc ? metalc5 D ZN ZN . A ZN 1 1_555 B OD2 ASP 32 A ASP 355 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? 
metalc ? metalc6 D ZN ZN . A ZN 1 1_555 B OE2 GLU 34 A GLU 357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? 
metalc ? metalc7 D ZN ZN . A ZN 1 1_555 B OD2 ASP 178 A ASP 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.936 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2KZM 
_atom_sites.fract_transf_matrix[1][1]    0.009747 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009747 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011601 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 MN B 1 2 2 MN MN . 
D 4 ZN A 1 1 1 ZN ZN . 
E 5 HOH B 1 58 58 HOH HOH . 
E 5 HOH B 2 102 102 HOH HOH . 
F 5 HOH A 1 5 5 HOH HOH . 
F 5 HOH A 2 6 6 HOH HOH . 
F 5 HOH A 3 7 7 HOH HOH . 
F 5 HOH A 4 8 8 HOH HOH . 
F 5 HOH A 5 9 9 HOH HOH . 
F 5 HOH A 6 10 10 HOH HOH . 
F 5 HOH A 7 11 11 HOH HOH . 
F 5 HOH A 8 12 12 HOH HOH . 
F 5 HOH A 9 13 13 HOH HOH . 
F 5 HOH A 10 14 14 HOH HOH . 
F 5 HOH A 11 15 15 HOH HOH . 
F 5 HOH A 12 16 16 HOH HOH . 
F 5 HOH A 13 17 17 HOH HOH . 
F 5 HOH A 14 18 18 HOH HOH . 
F 5 HOH A 15 19 19 HOH HOH . 
F 5 HOH A 16 20 20 HOH HOH . 
F 5 HOH A 17 21 21 HOH HOH . 
F 5 HOH A 18 22 22 HOH HOH . 
F 5 HOH A 19 23 23 HOH HOH . 
F 5 HOH A 20 24 24 HOH HOH . 
F 5 HOH A 21 25 25 HOH HOH . 
F 5 HOH A 22 26 26 HOH HOH . 
F 5 HOH A 23 27 27 HOH HOH . 
F 5 HOH A 24 28 28 HOH HOH . 
F 5 HOH A 25 29 29 HOH HOH . 
F 5 HOH A 26 30 30 HOH HOH . 
F 5 HOH A 27 31 31 HOH HOH . 
F 5 HOH A 28 32 32 HOH HOH . 
F 5 HOH A 29 33 33 HOH HOH . 
F 5 HOH A 30 34 34 HOH HOH . 
F 5 HOH A 31 35 35 HOH HOH . 
F 5 HOH A 32 36 36 HOH HOH . 
F 5 HOH A 33 37 37 HOH HOH . 
F 5 HOH A 34 38 38 HOH HOH . 
F 5 HOH A 35 39 39 HOH HOH . 
F 5 HOH A 36 40 40 HOH HOH . 
F 5 HOH A 37 41 41 HOH HOH . 
F 5 HOH A 38 42 42 HOH HOH . 
F 5 HOH A 39 43 43 HOH HOH . 
F 5 HOH A 40 44 44 HOH HOH . 
F 5 HOH A 41 45 45 HOH HOH . 
F 5 HOH A 42 46 46 HOH HOH . 
F 5 HOH A 43 47 47 HOH HOH . 
F 5 HOH A 44 48 48 HOH HOH . 
F 5 HOH A 45 49 49 HOH HOH . 
F 5 HOH A 46 50 50 HOH HOH . 
F 5 HOH A 47 51 51 HOH HOH . 
F 5 HOH A 48 52 52 HOH HOH . 
F 5 HOH A 49 53 53 HOH HOH . 
F 5 HOH A 50 54 54 HOH HOH . 
F 5 HOH A 51 55 55 HOH HOH . 
F 5 HOH A 52 56 56 HOH HOH . 
F 5 HOH A 53 57 57 HOH HOH . 
F 5 HOH A 54 59 59 HOH HOH . 
F 5 HOH A 55 60 60 HOH HOH . 
F 5 HOH A 56 61 61 HOH HOH . 
F 5 HOH A 57 62 62 HOH HOH . 
F 5 HOH A 58 63 63 HOH HOH . 
F 5 HOH A 59 64 64 HOH HOH . 
F 5 HOH A 60 65 65 HOH HOH . 
F 5 HOH A 61 66 66 HOH HOH . 
F 5 HOH A 62 67 67 HOH HOH . 
F 5 HOH A 63 68 68 HOH HOH . 
F 5 HOH A 64 69 69 HOH HOH . 
F 5 HOH A 65 70 70 HOH HOH . 
F 5 HOH A 66 71 71 HOH HOH . 
F 5 HOH A 67 72 72 HOH HOH . 
F 5 HOH A 68 73 73 HOH HOH . 
F 5 HOH A 69 74 74 HOH HOH . 
F 5 HOH A 70 75 75 HOH HOH . 
F 5 HOH A 71 76 76 HOH HOH . 
F 5 HOH A 72 77 77 HOH HOH . 
F 5 HOH A 73 78 78 HOH HOH . 
F 5 HOH A 74 79 79 HOH HOH . 
F 5 HOH A 75 80 80 HOH HOH . 
F 5 HOH A 76 81 81 HOH HOH . 
F 5 HOH A 77 82 82 HOH HOH . 
F 5 HOH A 78 83 83 HOH HOH . 
F 5 HOH A 79 84 84 HOH HOH . 
F 5 HOH A 80 85 85 HOH HOH . 
F 5 HOH A 81 86 86 HOH HOH . 
F 5 HOH A 82 87 87 HOH HOH . 
F 5 HOH A 83 88 88 HOH HOH . 
F 5 HOH A 84 89 89 HOH HOH . 
F 5 HOH A 85 90 90 HOH HOH . 
F 5 HOH A 86 91 91 HOH HOH . 
F 5 HOH A 87 92 92 HOH HOH . 
F 5 HOH A 88 93 93 HOH HOH . 
F 5 HOH A 89 94 94 HOH HOH . 
F 5 HOH A 90 95 95 HOH HOH . 
F 5 HOH A 91 96 96 HOH HOH . 
F 5 HOH A 92 97 97 HOH HOH . 
F 5 HOH A 93 98 98 HOH HOH . 
F 5 HOH A 94 99 99 HOH HOH . 
F 5 HOH A 95 100 100 HOH HOH . 
F 5 HOH A 96 101 101 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               61.264 
_atom_site.Cartn_y               30.22 
_atom_site.Cartn_z               86.77 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        69.83 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           2 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              100 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           332 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#