data_2LBU
#
_model_server_result.job_id            AGrdOOsqb6us2nkanh5NdA 
_model_server_result.datetime_utc      '2025-04-01 17:30:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2lbu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":1}' 
#
_entry.id    2LBU 
#
_exptl.entry_id    2LBU 
_exptl.method      'SOLID-STATE NMR' 
#
_entity.details                     ? 
_entity.formula_weight              696.663 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "sodium 3,3'-(1E,1'E)-biphenyl-4,4'-diylbis(diazene-2,1-diyl)bis(4-aminonaphthalene-1-sulfonate)" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C32 H22 N6 Na2 O6 S2' 
_chem_comp.formula_weight    696.663 
_chem_comp.id                CGO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "sodium 3,3'-(1E,1'E)-biphenyl-4,4'-diylbis(diazene-2,1-diyl)bis(4-aminonaphthalene-1-sulfonate)" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'congo red' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1' S1' CGO sing 70 n n 
C12 C13 CGO doub 71 n y 
C12 C11 CGO sing 72 n y 
O2' S1' CGO doub 73 n n 
S1' O3' CGO doub 74 n n 
S1' C9' CGO sing 75 n n 
C12' C11' CGO doub 76 n y 
C12' C13' CGO sing 77 n y 
C11' C10' CGO sing 78 n y 
C10' C9' CGO doub 79 n y 
C10' C15' CGO sing 80 n y 
C9' C8' CGO sing 81 n y 
C8' C7' CGO doub 82 n y 
C13' C14' CGO doub 83 n y 
C14' C15' CGO sing 84 n y 
C15' C16' CGO doub 85 n y 
C16' C7' CGO sing 86 n y 
C16' N3' CGO sing 87 n n 
C7' N2' CGO sing 88 n n 
N2' N1' CGO doub 89 n n 
N1' C4' CGO sing 90 n n 
C4' C5' CGO doub 91 n y 
C4' C3' CGO sing 92 n y 
C5' C6' CGO sing 93 n y 
C6' C1' CGO doub 94 n y 
O1 S1 CGO sing 95 n n 
C3' C2' CGO doub 96 n y 
C2' C1' CGO sing 97 n y 
C1' C1 CGO sing 98 n y 
C1 C2 CGO doub 99 n y 
C1 C6 CGO sing 100 n y 
C2 C3 CGO sing 101 n y 
C3 C4 CGO doub 102 n y 
S1 O2 CGO doub 103 n n 
S1 O3 CGO doub 104 n n 
S1 C9 CGO sing 105 n n 
N3 C16 CGO sing 106 n n 
C6 C5 CGO doub 107 n y 
C5 C4 CGO sing 108 n y 
C4 N1 CGO sing 109 n n 
N1 N2 CGO doub 110 n n 
N2 C7 CGO sing 111 n n 
C7 C16 CGO doub 112 n y 
C7 C8 CGO sing 113 n y 
C16 C15 CGO sing 114 n y 
C15 C14 CGO doub 115 n y 
C15 C10 CGO sing 116 n y 
C14 C13 CGO sing 117 n y 
C8 C9 CGO doub 118 n y 
C9 C10 CGO sing 119 n y 
C10 C11 CGO doub 120 n y 
O1' NA' CGO sing 121 n n 
C12 H12 CGO sing 122 n n 
C12' H12' CGO sing 123 n n 
C11' H11' CGO sing 124 n n 
C8' H8' CGO sing 125 n n 
C13' H13' CGO sing 126 n n 
C14' H14' CGO sing 127 n n 
C5' H5' CGO sing 128 n n 
C6' H6' CGO sing 129 n n 
O1 NA CGO sing 130 n n 
N3' HN1' CGO sing 131 n n 
N3' HN2' CGO sing 132 n n 
C3' H3' CGO sing 133 n n 
C2' H2' CGO sing 134 n n 
C2 H2 CGO sing 135 n n 
C3 H3 CGO sing 136 n n 
N3 HN2 CGO sing 137 n n 
N3 HN1 CGO sing 138 n n 
C6 H6 CGO sing 139 n n 
C5 H5 CGO sing 140 n n 
C14 H14 CGO sing 141 n n 
C13 H13 CGO sing 142 n n 
C8 H8 CGO sing 143 n n 
C11 H11 CGO sing 144 n n 
#
_atom_sites.entry_id                     2LBU 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          F 
_pdbx_nonpoly_scheme.entity_id        2 
_pdbx_nonpoly_scheme.mon_id           CGO 
_pdbx_nonpoly_scheme.pdb_strand_id    B 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      1 
_pdbx_nonpoly_scheme.auth_seq_num     1 
_pdbx_nonpoly_scheme.pdb_mon_id       CGO 
_pdbx_nonpoly_scheme.auth_mon_id      DRG 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1' CGO . . . F 2 -12.786 -0.04 -18.371 1 10 ? O1' CGO 1 B 1 
HETATM 2 C C12 CGO . . . F 2 8.527 -8.684 -16.171 1 10 ? C12 CGO 1 B 1 
HETATM 3 O O2' CGO . . . F 2 -11.404 1.905 -18.876 1 10 ? O2' CGO 1 B 1 
HETATM 4 S S1' CGO . . . F 2 -11.38 0.433 -18.595 1 10 ? S1' CGO 1 B 1 
HETATM 5 O O3' CGO . . . F 2 -10.825 -0.269 -19.798 1 10 ? O3' CGO 1 B 1 
HETATM 6 C C12' CGO . . . F 2 -12.471 1.607 -14.538 1 10 ? C12' CGO 1 B 1 
HETATM 7 C C11' CGO . . . F 2 -12.034 1.205 -15.795 1 10 ? C11' CGO 1 B 1 
HETATM 8 C C10' CGO . . . F 2 -10.835 0.514 -15.928 1 10 ? C10' CGO 1 B 1 
HETATM 9 C C9' CGO . . . F 2 -10.405 0.1 -17.183 1 10 ? C9' CGO 1 B 1 
HETATM 10 C C8' CGO . . . F 2 -9.204 -0.589 -17.307 1 10 ? C8' CGO 1 B 1 
HETATM 11 C C13' CGO . . . F 2 -11.701 1.324 -13.414 1 10 ? C13' CGO 1 B 1 
HETATM 12 C C14' CGO . . . F 2 -10.503 0.633 -13.549 1 10 ? C14' CGO 1 B 1 
HETATM 13 C C15' CGO . . . F 2 -10.07 0.226 -14.805 1 10 ? C15' CGO 1 B 1 
HETATM 14 C C16' CGO . . . F 2 -8.871 -0.466 -14.929 1 10 ? C16' CGO 1 B 1 
HETATM 15 C C7' CGO . . . F 2 -8.428 -0.866 -16.187 1 10 ? C7' CGO 1 B 1 
HETATM 16 N N2' CGO . . . F 2 -7.223 -1.401 -16.381 1 10 ? N2' CGO 1 B 1 
HETATM 17 N N1' CGO . . . F 2 -6.418 -1.554 -15.466 1 10 ? N1' CGO 1 B 1 
HETATM 18 C C4' CGO . . . F 2 -5.232 -2.107 -15.71 1 10 ? C4' CGO 1 B 1 
HETATM 19 C C5' CGO . . . F 2 -4.916 -2.533 -16.994 1 10 ? C5' CGO 1 B 1 
HETATM 20 C C6' CGO . . . F 2 -3.686 -3.127 -17.246 1 10 ? C6' CGO 1 B 1 
HETATM 21 O O1 CGO . . . F 2 6.667 -9.724 -19.375 1 10 ? O1 CGO 1 B 1 
HETATM 22 N N3' CGO . . . F 2 -8.256 -0.859 -13.816 1 10 ? N3' CGO 1 B 1 
HETATM 23 C C3' CGO . . . F 2 -4.319 -2.272 -14.678 1 10 ? C3' CGO 1 B 1 
HETATM 24 C C2' CGO . . . F 2 -3.086 -2.867 -14.926 1 10 ? C2' CGO 1 B 1 
HETATM 25 C C1' CGO . . . F 2 -2.772 -3.295 -16.213 1 10 ? C1' CGO 1 B 1 
HETATM 26 C C1 CGO . . . F 2 -1.549 -3.911 -16.464 1 10 ? C1 CGO 1 B 1 
HETATM 27 C C2 CGO . . . F 2 -0.595 -4.012 -15.455 1 10 ? C2 CGO 1 B 1 
HETATM 28 C C3 CGO . . . F 2 0.616 -4.643 -15.708 1 10 ? C3 CGO 1 B 1 
HETATM 29 S S1 CGO . . . F 2 5.75 -8.547 -19.542 1 10 ? S1 CGO 1 B 1 
HETATM 30 N N3 CGO . . . F 2 4.696 -6.13 -14.313 1 10 ? N3 CGO 1 B 1 
HETATM 31 O O2 CGO . . . F 2 6.381 -7.561 -20.478 1 10 ? O2 CGO 1 B 1 
HETATM 32 O O3 CGO . . . F 2 4.457 -9.034 -20.125 1 10 ? O3 CGO 1 B 1 
HETATM 33 C C6 CGO . . . F 2 -1.288 -4.436 -17.724 1 10 ? C6 CGO 1 B 1 
HETATM 34 C C5 CGO . . . F 2 -0.076 -5.068 -17.977 1 10 ? C5 CGO 1 B 1 
HETATM 35 C C4 CGO . . . F 2 0.878 -5.17 -16.968 1 10 ? C4 CGO 1 B 1 
HETATM 36 N N1 CGO . . . F 2 2.026 -5.799 -17.203 1 10 ? N1 CGO 1 B 1 
HETATM 37 N N2 CGO . . . F 2 2.858 -5.914 -16.304 1 10 ? N2 CGO 1 B 1 
HETATM 38 C C7 CGO . . . F 2 4.008 -6.546 -16.528 1 10 ? C7 CGO 1 B 1 
HETATM 39 C C16 CGO . . . F 2 4.943 -6.664 -15.506 1 10 ? C16 CGO 1 B 1 
HETATM 40 C C15 CGO . . . F 2 6.133 -7.347 -15.726 1 10 ? C15 CGO 1 B 1 
HETATM 41 C C14 CGO . . . F 2 7.07 -7.449 -14.706 1 10 ? C14 CGO 1 B 1 
HETATM 42 C C13 CGO . . . F 2 8.269 -8.116 -14.928 1 10 ? C13 CGO 1 B 1 
HETATM 43 C C8 CGO . . . F 2 4.265 -7.11 -17.773 1 10 ? C8 CGO 1 B 1 
HETATM 44 C C9 CGO . . . F 2 5.453 -7.798 -17.99 1 10 ? C9 CGO 1 B 1 
HETATM 45 C C10 CGO . . . F 2 6.388 -7.915 -16.968 1 10 ? C10 CGO 1 B 1 
HETATM 46 C C11 CGO . . . F 2 7.586 -8.583 -17.191 1 10 ? C11 CGO 1 B 1 
HETATM 47 H H12 CGO . . . F 2 9.389 -9.165 -16.332 1 10 ? H12 CGO 1 B 1 
HETATM 48 H H12' CGO . . . F 2 -13.337 2.098 -14.442 1 10 ? H12' CGO 1 B 1 
HETATM 49 H H11' CGO . . . F 2 -12.583 1.413 -16.605 1 10 ? H11' CGO 1 B 1 
HETATM 50 H H8' CGO . . . F 2 -8.895 -0.888 -18.21 1 10 ? H8' CGO 1 B 1 
HETATM 51 H H13' CGO . . . F 2 -12.01 1.618 -12.509 1 10 ? H13' CGO 1 B 1 
HETATM 52 H H14' CGO . . . F 2 -9.951 0.428 -12.74 1 10 ? H14' CGO 1 B 1 
HETATM 53 H H5' CGO . . . F 2 -5.574 -2.412 -17.737 1 10 ? H5' CGO 1 B 1 
HETATM 54 H H6' CGO . . . F 2 -3.458 -3.434 -18.17 1 10 ? H6' CGO 1 B 1 
HETATM 55 H HN1' CGO . . . F 2 -7.456 -1.456 -13.871 1 10 ? HN1' CGO 1 B 1 
HETATM 56 H HN2' CGO . . . F 2 -8.594 -0.557 -12.925 1 10 ? HN2' CGO 1 B 1 
HETATM 57 H H3' CGO . . . F 2 -4.548 -1.963 -13.755 1 10 ? H3' CGO 1 B 1 
HETATM 58 H H2' CGO . . . F 2 -2.428 -2.987 -14.183 1 10 ? H2' CGO 1 B 1 
HETATM 59 H H2 CGO . . . F 2 -0.781 -3.631 -14.55 1 10 ? H2 CGO 1 B 1 
HETATM 60 H H3 CGO . . . F 2 1.301 -4.719 -14.983 1 10 ? H3 CGO 1 B 1 
HETATM 61 H HN2 CGO . . . F 2 5.366 -6.22 -13.576 1 10 ? HN2 CGO 1 B 1 
HETATM 62 H HN1 CGO . . . F 2 3.84 -5.638 -14.153 1 10 ? HN1 CGO 1 B 1 
HETATM 63 H H6 CGO . . . F 2 -1.972 -4.359 -18.449 1 10 ? H6 CGO 1 B 1 
HETATM 64 H H5 CGO . . . F 2 0.11 -5.449 -18.883 1 10 ? H5 CGO 1 B 1 
HETATM 65 H H14 CGO . . . F 2 6.882 -7.043 -13.812 1 10 ? H14 CGO 1 B 1 
HETATM 66 H H13 CGO . . . F 2 8.945 -8.187 -14.195 1 10 ? H13 CGO 1 B 1 
HETATM 67 H H8 CGO . . . F 2 3.596 -7.021 -18.511 1 10 ? H8 CGO 1 B 1 
HETATM 68 H H11 CGO . . . F 2 7.772 -8.991 -18.085 1 10 ? H11 CGO 1 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           1190 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           68 
#