data_2LF1
#
_model_server_result.job_id            kG8gUMYyt-6_TB3Jl0V_Ug 
_model_server_result.datetime_utc      '2024-11-20 13:36:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2lf1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":170}' 
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_entry.id    2LF1 
#
_exptl.entry_id    2LF1 
_exptl.method      'SOLUTION NMR' 
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_entity.details                     ? 
_entity.formula_weight              745.421 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
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_pdbx_struct_assembly_gen.asym_id_list       A,B 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C21 H30 N7 O17 P3' 
_chem_comp.formula_weight    745.421 
_chem_comp.id                NDP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NDP doub 222 n n 
PA O2A NDP sing 223 n n 
PA O5B NDP sing 224 n n 
PA O3 NDP sing 225 n n 
O2A HOA2 NDP sing 226 n n 
O5B C5B NDP sing 227 n n 
C5B C4B NDP sing 228 n n 
C5B H51A NDP sing 229 n n 
C5B H52A NDP sing 230 n n 
C4B O4B NDP sing 231 n n 
C4B C3B NDP sing 232 n n 
C4B H4B NDP sing 233 n n 
O4B C1B NDP sing 234 n n 
C3B O3B NDP sing 235 n n 
C3B C2B NDP sing 236 n n 
C3B H3B NDP sing 237 n n 
O3B HO3A NDP sing 238 n n 
C2B O2B NDP sing 239 n n 
C2B C1B NDP sing 240 n n 
C2B H2B NDP sing 241 n n 
O2B P2B NDP sing 242 n n 
C1B N9A NDP sing 243 n n 
C1B H1B NDP sing 244 n n 
N9A C8A NDP sing 245 n y 
N9A C4A NDP sing 246 n y 
C8A N7A NDP doub 247 n y 
C8A H8A NDP sing 248 n n 
N7A C5A NDP sing 249 n y 
C5A C6A NDP sing 250 n y 
C5A C4A NDP doub 251 n y 
C6A N6A NDP sing 252 n n 
C6A N1A NDP doub 253 n y 
N6A H61A NDP sing 254 n n 
N6A H62A NDP sing 255 n n 
N1A C2A NDP sing 256 n y 
C2A N3A NDP doub 257 n y 
C2A H2A NDP sing 258 n n 
N3A C4A NDP sing 259 n y 
O3 PN NDP sing 260 n n 
PN O1N NDP doub 261 n n 
PN O2N NDP sing 262 n n 
PN O5D NDP sing 263 n n 
O2N H21N NDP sing 264 n n 
O5D C5D NDP sing 265 n n 
C5D C4D NDP sing 266 n n 
C5D H51N NDP sing 267 n n 
C5D H52N NDP sing 268 n n 
C4D O4D NDP sing 269 n n 
C4D C3D NDP sing 270 n n 
C4D H4D NDP sing 271 n n 
O4D C1D NDP sing 272 n n 
C3D O3D NDP sing 273 n n 
C3D C2D NDP sing 274 n n 
C3D H3D NDP sing 275 n n 
O3D HO3N NDP sing 276 n n 
C2D O2D NDP sing 277 n n 
C2D C1D NDP sing 278 n n 
C2D H2D NDP sing 279 n n 
O2D HO2N NDP sing 280 n n 
C1D N1N NDP sing 281 n n 
C1D H1D NDP sing 282 n n 
N1N C2N NDP sing 283 n n 
N1N C6N NDP sing 284 n n 
C2N C3N NDP doub 285 n n 
C2N H2N NDP sing 286 n n 
C3N C7N NDP sing 287 n n 
C3N C4N NDP sing 288 n n 
C7N O7N NDP doub 289 n n 
C7N N7N NDP sing 290 n n 
N7N H71N NDP sing 291 n n 
N7N H72N NDP sing 292 n n 
C4N C5N NDP sing 293 n n 
C4N H41N NDP sing 294 n n 
C4N H42N NDP sing 295 n n 
C5N C6N NDP doub 296 n n 
C5N H5N NDP sing 297 n n 
C6N H6N NDP sing 298 n n 
P2B O1X NDP doub 299 n n 
P2B O2X NDP sing 300 n n 
P2B O3X NDP sing 301 n n 
O2X HOP2 NDP sing 302 n n 
O3X HOP3 NDP sing 303 n n 
#
_atom_sites.entry_id                     2LF1 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          B 
_pdbx_nonpoly_scheme.entity_id        2 
_pdbx_nonpoly_scheme.mon_id           NDP 
_pdbx_nonpoly_scheme.pdb_strand_id    A 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      170 
_pdbx_nonpoly_scheme.auth_seq_num     170 
_pdbx_nonpoly_scheme.pdb_mon_id       NDP 
_pdbx_nonpoly_scheme.auth_mon_id      NDP 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NDP . . . B 2 -5.049 -3.478 -8.904 1 0 ? PA NDP 170 A 1 
HETATM 2 O O1A NDP . . . B 2 -5.632 -4.035 -7.672 1 0 ? O1A NDP 170 A 1 
HETATM 3 O O2A NDP . . . B 2 -5.695 -3.827 -10.184 1 0 ? O2A NDP 170 A 1 
HETATM 4 O O5B NDP . . . B 2 -4.822 -1.907 -8.781 1 0 ? O5B NDP 170 A 1 
HETATM 5 C C5B NDP . . . B 2 -4.851 -1.067 -9.948 1 0 ? C5B NDP 170 A 1 
HETATM 6 C C4B NDP . . . B 2 -6.167 -1.224 -10.672 1 0 ? C4B NDP 170 A 1 
HETATM 7 O O4B NDP . . . B 2 -7.256 -0.913 -9.762 1 0 ? O4B NDP 170 A 1 
HETATM 8 C C3B NDP . . . B 2 -6.38 -0.292 -11.854 1 0 ? C3B NDP 170 A 1 
HETATM 9 O O3B NDP . . . B 2 -5.802 -0.836 -13.045 1 0 ? O3B NDP 170 A 1 
HETATM 10 C C2B NDP . . . B 2 -7.899 -0.232 -11.943 1 0 ? C2B NDP 170 A 1 
HETATM 11 O O2B NDP . . . B 2 -8.467 -1.341 -12.608 1 0 ? O2B NDP 170 A 1 
HETATM 12 C C1B NDP . . . B 2 -8.287 -0.237 -10.462 1 0 ? C1B NDP 170 A 1 
HETATM 13 N N9A NDP . . . B 2 -8.408 1.107 -9.9 1 0 ? N9A NDP 170 A 1 
HETATM 14 C C8A NDP . . . B 2 -7.404 1.897 -9.396 1 0 ? C8A NDP 170 A 1 
HETATM 15 N N7A NDP . . . B 2 -7.816 3.062 -8.96 1 0 ? N7A NDP 170 A 1 
HETATM 16 C C5A NDP . . . B 2 -9.183 3.04 -9.193 1 0 ? C5A NDP 170 A 1 
HETATM 17 C C6A NDP . . . B 2 -10.202 3.982 -8.953 1 0 ? C6A NDP 170 A 1 
HETATM 18 N N6A NDP . . . B 2 -9.989 5.179 -8.403 1 0 ? N6A NDP 170 A 1 
HETATM 19 N N1A NDP . . . B 2 -11.465 3.646 -9.304 1 0 ? N1A NDP 170 A 1 
HETATM 20 C C2A NDP . . . B 2 -11.68 2.443 -9.856 1 0 ? C2A NDP 170 A 1 
HETATM 21 N N3A NDP . . . B 2 -10.806 1.475 -10.132 1 0 ? N3A NDP 170 A 1 
HETATM 22 C C4A NDP . . . B 2 -9.562 1.84 -9.772 1 0 ? C4A NDP 170 A 1 
HETATM 23 O O3 NDP . . . B 2 -3.466 -3.932 -8.979 1 0 ? O3 NDP 170 A 1 
HETATM 24 P PN NDP . . . B 2 -2.51 -4.989 -8.15 1 0 ? PN NDP 170 A 1 
HETATM 25 O O1N NDP . . . B 2 -3.051 -5.135 -6.785 1 0 ? O1N NDP 170 A 1 
HETATM 26 O O2N NDP . . . B 2 -2.362 -6.214 -8.96 1 0 ? O2N NDP 170 A 1 
HETATM 27 O O5D NDP . . . B 2 -1.174 -4.122 -8.156 1 0 ? O5D NDP 170 A 1 
HETATM 28 C C5D NDP . . . B 2 -0.308 -4.113 -9.304 1 0 ? C5D NDP 170 A 1 
HETATM 29 C C4D NDP . . . B 2 0.894 -4.991 -9.056 1 0 ? C4D NDP 170 A 1 
HETATM 30 O O4D NDP . . . B 2 1.716 -4.41 -8.011 1 0 ? O4D NDP 170 A 1 
HETATM 31 C C3D NDP . . . B 2 0.592 -6.395 -8.558 1 0 ? C3D NDP 170 A 1 
HETATM 32 O O3D NDP . . . B 2 0.302 -7.274 -9.65 1 0 ? O3D NDP 170 A 1 
HETATM 33 C C2D NDP . . . B 2 1.897 -6.778 -7.871 1 0 ? C2D NDP 170 A 1 
HETATM 34 O O2D NDP . . . B 2 2.895 -7.245 -8.779 1 0 ? O2D NDP 170 A 1 
HETATM 35 C C1D NDP . . . B 2 2.323 -5.443 -7.253 1 0 ? C1D NDP 170 A 1 
HETATM 36 N N1N NDP . . . B 2 1.928 -5.28 -5.854 1 0 ? N1N NDP 170 A 1 
HETATM 37 C C2N NDP . . . B 2 2.673 -5.051 -4.777 1 0 ? C2N NDP 170 A 1 
HETATM 38 C C3N NDP . . . B 2 2.257 -4.881 -3.561 1 0 ? C3N NDP 170 A 1 
HETATM 39 C C7N NDP . . . B 2 3.375 -4.669 -2.681 1 0 ? C7N NDP 170 A 1 
HETATM 40 O O7N NDP . . . B 2 2.824 -4.392 -1.52 1 0 ? O7N NDP 170 A 1 
HETATM 41 N N7N NDP . . . B 2 4.709 -4.672 -2.923 1 0 ? N7N NDP 170 A 1 
HETATM 42 C C4N NDP . . . B 2 0.774 -4.95 -3.316 1 0 ? C4N NDP 170 A 1 
HETATM 43 C C5N NDP . . . B 2 -0.093 -5.198 -4.44 1 0 ? C5N NDP 170 A 1 
HETATM 44 C C6N NDP . . . B 2 0.393 -5.372 -5.728 1 0 ? C6N NDP 170 A 1 
HETATM 45 P P2B NDP . . . B 2 -8.25 -1.808 -14.197 1 0 ? P2B NDP 170 A 1 
HETATM 46 O O1X NDP . . . B 2 -9.752 -1.666 -14.663 1 0 ? O1X NDP 170 A 1 
HETATM 47 O O2X NDP . . . B 2 -7.441 -0.623 -14.723 1 0 ? O2X NDP 170 A 1 
HETATM 48 O O3X NDP . . . B 2 -7.914 -3.286 -14.005 1 0 ? O3X NDP 170 A 1 
HETATM 49 H H51A NDP . . . B 2 -4.035 -1.345 -10.615 1 0 ? H51A NDP 170 A 1 
HETATM 50 H H52A NDP . . . B 2 -4.722 -0.027 -9.65 1 0 ? H52A NDP 170 A 1 
HETATM 51 H H4B NDP . . . B 2 -6.29 -2.239 -11.048 1 0 ? H4B NDP 170 A 1 
HETATM 52 H H3B NDP . . . B 2 -5.966 0.701 -11.672 1 0 ? H3B NDP 170 A 1 
HETATM 53 H HO3A NDP . . . B 2 -4.849 -0.854 -12.957 1 0 ? HO3A NDP 170 A 1 
HETATM 54 H H2B NDP . . . B 2 -8.238 0.679 -12.434 1 0 ? H2B NDP 170 A 1 
HETATM 55 H H1B NDP . . . B 2 -9.245 -0.728 -10.284 1 0 ? H1B NDP 170 A 1 
HETATM 56 H H8A NDP . . . B 2 -6.361 1.583 -9.359 1 0 ? H8A NDP 170 A 1 
HETATM 57 H H61A NDP . . . B 2 -10.762 5.811 -8.255 1 0 ? H61A NDP 170 A 1 
HETATM 58 H H62A NDP . . . B 2 -9.068 5.422 -8.066 1 0 ? H62A NDP 170 A 1 
HETATM 59 H H2A NDP . . . B 2 -12.716 2.225 -10.113 1 0 ? H2A NDP 170 A 1 
HETATM 60 H H51N NDP . . . B 2 0.02 -3.093 -9.501 1 0 ? H51N NDP 170 A 1 
HETATM 61 H H52N NDP . . . B 2 -0.853 -4.481 -10.174 1 0 ? H52N NDP 170 A 1 
HETATM 62 H H4D NDP . . . B 2 1.487 -5.098 -9.964 1 0 ? H4D NDP 170 A 1 
HETATM 63 H H3D NDP . . . B 2 -0.233 -6.408 -7.844 1 0 ? H3D NDP 170 A 1 
HETATM 64 H HO3N NDP . . . B 2 -0.056 -8.094 -9.313 1 0 ? HO3N NDP 170 A 1 
HETATM 65 H H2D NDP . . . B 2 1.754 -7.538 -7.108 1 0 ? H2D NDP 170 A 1 
HETATM 66 H HO2N NDP . . . B 2 2.602 -7.1 -9.678 1 0 ? HO2N NDP 170 A 1 
HETATM 67 H H1D NDP . . . B 2 3.406 -5.318 -7.27 1 0 ? H1D NDP 170 A 1 
HETATM 68 H H2N NDP . . . B 2 3.751 -5.002 -4.933 1 0 ? H2N NDP 170 A 1 
HETATM 69 H H71N NDP . . . B 2 5.352 -4.442 -2.179 1 0 ? H71N NDP 170 A 1 
HETATM 70 H H72N NDP . . . B 2 5.059 -5.064 -3.782 1 0 ? H72N NDP 170 A 1 
HETATM 71 H H41N NDP . . . B 2 0.478 -3.991 -2.894 1 0 ? H41N NDP 170 A 1 
HETATM 72 H H42N NDP . . . B 2 0.609 -5.76 -2.606 1 0 ? H42N NDP 170 A 1 
HETATM 73 H H5N NDP . . . B 2 -1.169 -5.247 -4.273 1 0 ? H5N NDP 170 A 1 
HETATM 74 H H6N NDP . . . B 2 -0.258 -5.56 -6.582 1 0 ? H6N NDP 170 A 1 
#
_model_server_stats.io_time_ms              120 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    100 
_model_server_stats.query_time_ms           8344 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           74 
#