data_2LIR # _model_server_result.job_id Lmwq46NmMpKJePY2rVZHTA _model_server_result.datetime_utc '2024-10-14 08:20:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2lir # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":104}' # _entry.id 2LIR # _exptl.entry_id 2LIR _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 618.503 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 19 A CYS 14 1_555 B CAB HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.819 ? covale ? covale2 A SG CYS 22 A CYS 17 1_555 B CAC HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.816 ? metalc ? metalc1 A NE2 HIS 23 A HIS 18 1_555 B FE HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc2 A NE2 HIS 76 A HIS 71 1_555 B FE HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2LIR _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id HEC _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 104 _pdbx_nonpoly_scheme.auth_seq_num 104 _pdbx_nonpoly_scheme.pdb_mon_id HEC _pdbx_nonpoly_scheme.auth_mon_id HEC _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . B 2 4.891 -2.339 1.685 1 0 ? FE HEC 104 A 1 HETATM 2 C CHA HEC . . . B 2 3.129 -5.166 1.062 1 0 ? CHA HEC 104 A 1 HETATM 3 C CHB HEC . . . B 2 2.187 -0.462 0.901 1 0 ? CHB HEC 104 A 1 HETATM 4 C CHC HEC . . . B 2 6.659 0.487 2.3 1 0 ? CHC HEC 104 A 1 HETATM 5 C CHD HEC . . . B 2 7.638 -4.194 2.346 1 0 ? CHD HEC 104 A 1 HETATM 6 N NA HEC . . . B 2 3.051 -2.728 1.119 1 0 ? NA HEC 104 A 1 HETATM 7 C C1A HEC . . . B 2 2.466 -3.964 0.901 1 0 ? C1A HEC 104 A 1 HETATM 8 C C2A HEC . . . B 2 1.067 -3.822 0.508 1 0 ? C2A HEC 104 A 1 HETATM 9 C C3A HEC . . . B 2 0.831 -2.492 0.435 1 0 ? C3A HEC 104 A 1 HETATM 10 C C4A HEC . . . B 2 2.043 -1.827 0.844 1 0 ? C4A HEC 104 A 1 HETATM 11 C CMA HEC . . . B 2 -0.411 -1.841 -0.079 1 0 ? CMA HEC 104 A 1 HETATM 12 C CAA HEC . . . B 2 0.021 -4.894 0.419 1 0 ? CAA HEC 104 A 1 HETATM 13 C CBA HEC . . . B 2 -0.796 -4.806 -0.874 1 0 ? CBA HEC 104 A 1 HETATM 14 C CGA HEC . . . B 2 -0.703 -6.128 -1.635 1 0 ? CGA HEC 104 A 1 HETATM 15 O O1A HEC . . . B 2 0.031 -6.177 -2.606 1 0 ? O1A HEC 104 A 1 HETATM 16 O O2A HEC . . . B 2 -1.375 -7.067 -1.239 1 0 ? O2A HEC 104 A 1 HETATM 17 N NB HEC . . . B 2 4.507 -0.413 1.615 1 0 ? NB HEC 104 A 1 HETATM 18 C C1B HEC . . . B 2 3.331 0.201 1.253 1 0 ? C1B HEC 104 A 1 HETATM 19 C C2B HEC . . . B 2 3.426 1.635 1.341 1 0 ? C2B HEC 104 A 1 HETATM 20 C C3B HEC . . . B 2 4.693 1.921 1.706 1 0 ? C3B HEC 104 A 1 HETATM 21 C C4B HEC . . . B 2 5.351 0.642 1.913 1 0 ? C4B HEC 104 A 1 HETATM 22 C CMB HEC . . . B 2 2.296 2.597 1.276 1 0 ? CMB HEC 104 A 1 HETATM 23 C CAB HEC . . . B 2 5.296 3.293 1.777 1 0 ? CAB HEC 104 A 1 HETATM 24 C CBB HEC . . . B 2 4.657 4.154 2.87 1 0 ? CBB HEC 104 A 1 HETATM 25 N NC HEC . . . B 2 6.729 -1.942 2.227 1 0 ? NC HEC 104 A 1 HETATM 26 C C1C HEC . . . B 2 7.303 -0.708 2.44 1 0 ? C1C HEC 104 A 1 HETATM 27 C C2C HEC . . . B 2 8.68 -0.82 2.824 1 0 ? C2C HEC 104 A 1 HETATM 28 C C3C HEC . . . B 2 8.989 -2.129 2.773 1 0 ? C3C HEC 104 A 1 HETATM 29 C C4C HEC . . . B 2 7.76 -2.828 2.452 1 0 ? C4C HEC 104 A 1 HETATM 30 C CMC HEC . . . B 2 9.53 0.263 3.388 1 0 ? CMC HEC 104 A 1 HETATM 31 C CAC HEC . . . B 2 10.367 -2.687 2.804 1 0 ? CAC HEC 104 A 1 HETATM 32 C CBC HEC . . . B 2 10.998 -2.653 4.197 1 0 ? CBC HEC 104 A 1 HETATM 33 N ND HEC . . . B 2 5.289 -4.256 1.721 1 0 ? ND HEC 104 A 1 HETATM 34 C C1D HEC . . . B 2 6.489 -4.865 2.006 1 0 ? C1D HEC 104 A 1 HETATM 35 C C2D HEC . . . B 2 6.39 -6.304 1.943 1 0 ? C2D HEC 104 A 1 HETATM 36 C C3D HEC . . . B 2 5.116 -6.58 1.538 1 0 ? C3D HEC 104 A 1 HETATM 37 C C4D HEC . . . B 2 4.441 -5.305 1.446 1 0 ? C4D HEC 104 A 1 HETATM 38 C CMD HEC . . . B 2 7.394 -7.259 2.489 1 0 ? CMD HEC 104 A 1 HETATM 39 C CAD HEC . . . B 2 4.528 -7.901 1.114 1 0 ? CAD HEC 104 A 1 HETATM 40 C CBD HEC . . . B 2 5.534 -9.047 0.947 1 0 ? CBD HEC 104 A 1 HETATM 41 C CGD HEC . . . B 2 4.996 -10.042 -0.081 1 0 ? CGD HEC 104 A 1 HETATM 42 O O1D HEC . . . B 2 5.712 -10.343 -1.021 1 0 ? O1D HEC 104 A 1 HETATM 43 O O2D HEC . . . B 2 3.879 -10.494 0.098 1 0 ? O2D HEC 104 A 1 HETATM 44 H HHA HEC . . . B 2 2.578 -6.08 0.867 1 0 ? HHA HEC 104 A 1 HETATM 45 H HHB HEC . . . B 2 1.324 0.147 0.642 1 0 ? HHB HEC 104 A 1 HETATM 46 H HHC HEC . . . B 2 7.233 1.38 2.525 1 0 ? HHC HEC 104 A 1 HETATM 47 H HHD HEC . . . B 2 8.518 -4.794 2.544 1 0 ? HHD HEC 104 A 1 HETATM 48 H HMA1 HEC . . . B 2 -0.607 -0.94 0.479 1 0 ? HMA1 HEC 104 A 1 HETATM 49 H HMA2 HEC . . . B 2 -1.244 -2.514 0.036 1 0 ? HMA2 HEC 104 A 1 HETATM 50 H HMA3 HEC . . . B 2 -0.285 -1.599 -1.124 1 0 ? HMA3 HEC 104 A 1 HETATM 51 H HAA1 HEC . . . B 2 0.486 -5.86 0.465 1 0 ? HAA1 HEC 104 A 1 HETATM 52 H HAA2 HEC . . . B 2 -0.652 -4.793 1.256 1 0 ? HAA2 HEC 104 A 1 HETATM 53 H HBA1 HEC . . . B 2 -0.409 -4.008 -1.49 1 0 ? HBA1 HEC 104 A 1 HETATM 54 H HBA2 HEC . . . B 2 -1.829 -4.606 -0.633 1 0 ? HBA2 HEC 104 A 1 HETATM 55 H HMB1 HEC . . . B 2 1.786 2.49 0.33 1 0 ? HMB1 HEC 104 A 1 HETATM 56 H HMB2 HEC . . . B 2 1.607 2.397 2.08 1 0 ? HMB2 HEC 104 A 1 HETATM 57 H HMB3 HEC . . . B 2 2.677 3.602 1.368 1 0 ? HMB3 HEC 104 A 1 HETATM 58 H HAB HEC . . . B 2 6.349 3.23 1.96 1 0 ? HAB HEC 104 A 1 HETATM 59 H HBB1 HEC . . . B 2 5.412 4.448 3.584 1 0 ? HBB1 HEC 104 A 1 HETATM 60 H HBB2 HEC . . . B 2 3.887 3.587 3.372 1 0 ? HBB2 HEC 104 A 1 HETATM 61 H HBB3 HEC . . . B 2 4.221 5.036 2.425 1 0 ? HBB3 HEC 104 A 1 HETATM 62 H HMC1 HEC . . . B 2 10.497 -0.137 3.651 1 0 ? HMC1 HEC 104 A 1 HETATM 63 H HMC2 HEC . . . B 2 9.651 1.045 2.653 1 0 ? HMC2 HEC 104 A 1 HETATM 64 H HMC3 HEC . . . B 2 9.056 0.669 4.271 1 0 ? HMC3 HEC 104 A 1 HETATM 65 H HAC HEC . . . B 2 10.364 -3.695 2.433 1 0 ? HAC HEC 104 A 1 HETATM 66 H HBC1 HEC . . . B 2 11.888 -2.042 4.174 1 0 ? HBC1 HEC 104 A 1 HETATM 67 H HBC2 HEC . . . B 2 10.293 -2.237 4.902 1 0 ? HBC2 HEC 104 A 1 HETATM 68 H HBC3 HEC . . . B 2 11.259 -3.657 4.498 1 0 ? HBC3 HEC 104 A 1 HETATM 69 H HMD1 HEC . . . B 2 8.088 -7.54 1.711 1 0 ? HMD1 HEC 104 A 1 HETATM 70 H HMD2 HEC . . . B 2 6.897 -8.128 2.861 1 0 ? HMD2 HEC 104 A 1 HETATM 71 H HMD3 HEC . . . B 2 7.933 -6.793 3.298 1 0 ? HMD3 HEC 104 A 1 HETATM 72 H HAD1 HEC . . . B 2 4.032 -7.757 0.17 1 0 ? HAD1 HEC 104 A 1 HETATM 73 H HAD2 HEC . . . B 2 3.792 -8.199 1.843 1 0 ? HAD2 HEC 104 A 1 HETATM 74 H HBD1 HEC . . . B 2 5.659 -9.559 1.888 1 0 ? HBD1 HEC 104 A 1 HETATM 75 H HBD2 HEC . . . B 2 6.48 -8.659 0.608 1 0 ? HBD2 HEC 104 A 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 67 _model_server_stats.query_time_ms 6552 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 75 #