# Name: GDP # Created by ModelServer 0.9.12 # model_server_result.job_id: rTmKHsGzn0JlqJ7ZRjZL5Q # model_server_result.datetime_utc: 2024-12-05 12:40:05 # model_server_result.server_version: 0.9.12 # model_server_result.query_name: ligand # model_server_result.source_id: pdb-bcif # model_server_result.entry_id: 2lkd # model_server_params.name: atom_site # model_server_params.value: {"label_asym_id":"B","auth_seq_id":179} # model_server_stats.io_time_ms: 21 # model_server_stats.parse_time_ms: 7 # model_server_stats.create_model_time_ms: 76 # model_server_stats.query_time_ms: 5447 # model_server_stats.encode_time_ms: 0 # model_server_stats.element_count: 40 @MOLECULE GDP 40 42 1 **** **** @ATOM 1 PB -8.754 -3.245 15.263 P.3 1 GDP 0.000 2 O1B -8.576 -4.641 15.764 O.2 1 GDP 0.000 3 O2B -10.051 -3.033 14.498 O.3 1 GDP 0.000 4 O3B -7.519 -2.635 14.568 O.3 1 GDP 0.000 5 O3A -8.946 -2.335 16.648 O.3 1 GDP 0.000 6 PA -9.804 -1.048 16.904 P.3 1 GDP 0.000 7 O1A -10.360 -1.024 18.278 O.2 1 GDP 0.000 8 O2A -10.748 -0.738 15.765 O.3 1 GDP 0.000 9 O5' -8.661 0.083 16.817 O.3 1 GDP 0.000 10 C5' -7.412 -0.106 17.477 C.3 1 GDP 0.000 11 C4' -6.758 1.223 17.777 C.3 1 GDP 0.000 12 O4' -6.315 1.831 16.544 O.3 1 GDP 0.000 13 C3' -7.656 2.286 18.403 C.3 1 GDP 0.000 14 O3' -7.572 2.240 19.822 O.3 1 GDP 0.000 15 C2' -7.131 3.617 17.849 C.3 1 GDP 0.000 16 O2' -6.507 4.392 18.855 O.3 1 GDP 0.000 17 C1' -6.077 3.191 16.825 C.3 1 GDP 0.000 18 N9 -6.120 3.945 15.576 N.ar 1 GDP 0.000 19 C8 -6.924 3.705 14.491 C.ar 1 GDP 0.000 20 N7 -6.728 4.538 13.506 N.ar 1 GDP 0.000 21 C5 -5.731 5.386 13.969 C.ar 1 GDP 0.000 22 C6 -5.099 6.492 13.340 C.2 1 GDP 0.000 23 O6 -5.292 6.951 12.208 O.2 1 GDP 0.000 24 N1 -4.136 7.075 14.160 N.am 1 GDP 0.000 25 C2 -3.831 6.640 15.429 C.cat 1 GDP 0.000 26 N2 -2.880 7.329 16.076 N.pl3 1 GDP 0.000 27 N3 -4.411 5.614 16.027 N.2 1 GDP 0.000 28 C4 -5.346 5.034 15.245 C.ar 1 GDP 0.000 29 H5' -6.750 -0.697 16.845 H 1 GDP 0.000 30 H5'' -7.569 -0.638 18.415 H 1 GDP 0.000 31 H4' -5.949 1.038 18.484 H 1 GDP 0.000 32 H3' -8.703 2.119 18.163 H 1 GDP 0.000 33 HO3' -6.946 2.917 20.091 H 1 GDP 0.000 34 H2' -7.945 4.161 17.364 H 1 GDP 0.000 35 HO2' -5.743 3.899 19.160 H 1 GDP 0.000 36 H1' -5.065 3.262 17.227 H 1 GDP 0.000 37 H8 -7.638 2.897 14.451 H 1 GDP 0.000 38 HN1 -3.618 7.856 13.785 H 1 GDP 0.000 39 HN21 -2.608 7.060 17.013 H 1 GDP 0.000 40 HN22 -2.437 8.121 15.630 H 1 GDP 0.000 @BOND 1 1 2 2 2 1 3 1 3 1 4 1 4 1 5 1 5 5 6 1 6 6 7 2 7 6 8 1 8 6 9 1 9 9 10 1 10 10 11 1 11 10 29 1 12 10 30 1 13 11 12 1 14 11 13 1 15 11 31 1 16 12 17 1 17 13 14 1 18 13 15 1 19 13 32 1 20 14 33 1 21 15 16 1 22 15 17 1 23 15 34 1 24 16 35 1 25 17 18 1 26 17 36 1 27 18 19 ar 28 18 28 ar 29 19 20 ar 30 19 37 1 31 20 21 ar 32 21 22 1 33 21 28 ar 34 22 23 2 35 22 24 1 36 24 25 1 37 24 38 1 38 25 26 1 39 25 27 2 40 26 39 1 41 26 40 1 42 27 28 1 @SUBSTRUCTURE 1 GDP 1