data_2LYA # _model_server_result.job_id LnKbGlAech_QWcR5IZBFpg _model_server_result.datetime_utc '2024-10-14 08:21:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2lya # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":300}' # _entry.id 2LYA # _exptl.entry_id 2LYA _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 510.622 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-DIOCTANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H49 N O8 P 1' _chem_comp.formula_weight 510.622 _chem_comp.id PC8 _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-DIOCTANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 P1 PC8 sing 216 n n O1 H1P PC8 sing 217 n n O2 P1 PC8 doub 218 n n P1 O3 PC8 sing 219 n n P1 O4 PC8 sing 220 n n O3 C1 PC8 sing 221 n n C1 C2 PC8 sing 222 n n C1 H1 PC8 sing 223 n n C1 H2 PC8 sing 224 n n C2 N1 PC8 sing 225 n n C2 H3 PC8 sing 226 n n C2 H4 PC8 sing 227 n n N1 C3 PC8 sing 228 n n N1 C4 PC8 sing 229 n n N1 C5 PC8 sing 230 n n C3 H5 PC8 sing 231 n n C3 H6 PC8 sing 232 n n C3 H7 PC8 sing 233 n n C4 H8 PC8 sing 234 n n C4 H9 PC8 sing 235 n n C4 H10 PC8 sing 236 n n C5 H11 PC8 sing 237 n n C5 H12 PC8 sing 238 n n C5 H13 PC8 sing 239 n n O4 C6 PC8 sing 240 n n C6 C7 PC8 sing 241 n n C6 H14 PC8 sing 242 n n C6 H15 PC8 sing 243 n n C7 C8 PC8 sing 244 n n C7 O7 PC8 sing 245 n n C7 H16 PC8 sing 246 n n C8 O5 PC8 sing 247 n n C8 H17 PC8 sing 248 n n C8 H18 PC8 sing 249 n n O5 C9 PC8 sing 250 n n C9 O6 PC8 doub 251 n n C9 C10 PC8 sing 252 n n C10 C11 PC8 sing 253 n n C10 H19 PC8 sing 254 n n C10 H20 PC8 sing 255 n n C11 C12 PC8 sing 256 n n C11 H21 PC8 sing 257 n n C11 H22 PC8 sing 258 n n C12 C13 PC8 sing 259 n n C12 H23 PC8 sing 260 n n C12 H24 PC8 sing 261 n n C13 C14 PC8 sing 262 n n C13 H25 PC8 sing 263 n n C13 H26 PC8 sing 264 n n C14 C15 PC8 sing 265 n n C14 H27 PC8 sing 266 n n C14 H28 PC8 sing 267 n n C15 C16 PC8 sing 268 n n C15 H29 PC8 sing 269 n n C15 H30 PC8 sing 270 n n C16 H31 PC8 sing 271 n n C16 H32 PC8 sing 272 n n C16 H33 PC8 sing 273 n n O7 C17 PC8 sing 274 n n C17 O8 PC8 doub 275 n n C17 C18 PC8 sing 276 n n C18 C19 PC8 sing 277 n n C18 H34 PC8 sing 278 n n C18 H35 PC8 sing 279 n n C19 C20 PC8 sing 280 n n C19 H36 PC8 sing 281 n n C19 H37 PC8 sing 282 n n C20 C21 PC8 sing 283 n n C20 H38 PC8 sing 284 n n C20 H39 PC8 sing 285 n n C21 C22 PC8 sing 286 n n C21 H40 PC8 sing 287 n n C21 H41 PC8 sing 288 n n C22 C23 PC8 sing 289 n n C22 H42 PC8 sing 290 n n C22 H43 PC8 sing 291 n n C23 C24 PC8 sing 292 n n C23 H44 PC8 sing 293 n n C23 H45 PC8 sing 294 n n C24 H46 PC8 sing 295 n n C24 H47 PC8 sing 296 n n C24 H48 PC8 sing 297 n n # _atom_sites.entry_id 2LYA _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id PC8 _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 300 _pdbx_nonpoly_scheme.auth_seq_num 300 _pdbx_nonpoly_scheme.pdb_mon_id PC8 _pdbx_nonpoly_scheme.auth_mon_id PC8 _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PC8 . . . B 2 7.781 14.46 -29.191 1 11.44 ? O1 PC8 300 A 1 HETATM 2 O O2 PC8 . . . B 2 9.35 12.547 -28.857 1 31.34 ? O2 PC8 300 A 1 HETATM 3 P P1 PC8 . . . B 2 8.445 13.649 -28.168 1 22.31 ? P1 PC8 300 A 1 HETATM 4 O O3 PC8 . . . B 2 9.372 14.521 -27.199 1 64.25 ? O3 PC8 300 A 1 HETATM 5 C C1 PC8 . . . B 2 10.615 15.029 -27.724 1 60.21 ? C1 PC8 300 A 1 HETATM 6 C C2 PC8 . . . B 2 11.413 15.908 -26.722 1 3.43 ? C2 PC8 300 A 1 HETATM 7 N N1 PC8 . . . B 2 11.891 15.267 -25.424 1 31.12 ? N1 PC8 300 A 1 HETATM 8 C C3 PC8 . . . B 2 12.573 13.938 -25.658 1 14.21 ? C3 PC8 300 A 1 HETATM 9 C C4 PC8 . . . B 2 12.905 16.204 -24.809 1 10.02 ? C4 PC8 300 A 1 HETATM 10 C C5 PC8 . . . B 2 10.755 15.07 -24.445 1 30.43 ? C5 PC8 300 A 1 HETATM 11 O O4 PC8 . . . B 2 7.364 12.884 -27.264 1 43.43 ? O4 PC8 300 A 1 HETATM 12 C C6 PC8 . . . B 2 6.17 13.614 -26.891 1 1.25 ? C6 PC8 300 A 1 HETATM 13 C C7 PC8 . . . B 2 4.852 12.793 -27.024 1 50.21 ? C7 PC8 300 A 1 HETATM 14 C C8 PC8 . . . B 2 4.952 11.348 -26.482 1 13.03 ? C8 PC8 300 A 1 HETATM 15 O O5 PC8 . . . B 2 5.885 10.585 -27.254 1 62.1 ? O5 PC8 300 A 1 HETATM 16 C C9 PC8 . . . B 2 7.095 10.117 -26.834 1 60.41 ? C9 PC8 300 A 1 HETATM 17 O O6 PC8 . . . B 2 7.428 10.196 -25.627 1 61.42 ? O6 PC8 300 A 1 HETATM 18 C C10 PC8 . . . B 2 7.991 9.546 -27.861 1 71.2 ? C10 PC8 300 A 1 HETATM 19 C C11 PC8 . . . B 2 9.186 8.719 -27.314 1 45.13 ? C11 PC8 300 A 1 HETATM 20 C C12 PC8 . . . B 2 10.164 8.28 -28.437 1 12.22 ? C12 PC8 300 A 1 HETATM 21 C C13 PC8 . . . B 2 9.508 7.308 -29.454 1 1.42 ? C13 PC8 300 A 1 HETATM 22 C C14 PC8 . . . B 2 8.908 6.051 -28.77 1 4.1 ? C14 PC8 300 A 1 HETATM 23 C C15 PC8 . . . B 2 8.426 4.988 -29.792 1 42.02 ? C15 PC8 300 A 1 HETATM 24 C C16 PC8 . . . B 2 8.698 3.542 -29.32 1 43.4 ? C16 PC8 300 A 1 HETATM 25 O O7 PC8 . . . B 2 3.727 13.414 -26.376 1 60.12 ? O7 PC8 300 A 1 HETATM 26 C C17 PC8 . . . B 2 2.458 12.925 -26.232 1 61.14 ? C17 PC8 300 A 1 HETATM 27 O O8 PC8 . . . B 2 2.136 12.274 -25.208 1 42.12 ? O8 PC8 300 A 1 HETATM 28 C C18 PC8 . . . B 2 1.479 13.214 -27.304 1 4.42 ? C18 PC8 300 A 1 HETATM 29 C C19 PC8 . . . B 2 0.535 12.038 -27.679 1 42.24 ? C19 PC8 300 A 1 HETATM 30 C C20 PC8 . . . B 2 -0.84 12.116 -26.96 1 43.02 ? C20 PC8 300 A 1 HETATM 31 C C21 PC8 . . . B 2 -0.897 11.223 -25.692 1 11.03 ? C21 PC8 300 A 1 HETATM 32 C C22 PC8 . . . B 2 -1.247 12.02 -24.406 1 40.52 ? C22 PC8 300 A 1 HETATM 33 C C23 PC8 . . . B 2 -1.591 11.094 -23.209 1 44.52 ? C23 PC8 300 A 1 HETATM 34 C C24 PC8 . . . B 2 -2.956 10.388 -23.367 1 2.02 ? C24 PC8 300 A 1 HETATM 35 H H1 PC8 . . . B 2 11.245 14.235 -28.127 1 64.33 ? H1 PC8 300 A 1 HETATM 36 H H2 PC8 . . . B 2 10.312 15.653 -28.563 1 13.34 ? H2 PC8 300 A 1 HETATM 37 H H3 PC8 . . . B 2 12.276 16.289 -27.282 1 71.05 ? H3 PC8 300 A 1 HETATM 38 H H4 PC8 . . . B 2 10.789 16.778 -26.49 1 73.43 ? H4 PC8 300 A 1 HETATM 39 H H5 PC8 . . . B 2 11.844 13.138 -25.824 1 50.31 ? H5 PC8 300 A 1 HETATM 40 H H6 PC8 . . . B 2 13.213 13.962 -26.542 1 74.24 ? H6 PC8 300 A 1 HETATM 41 H H7 PC8 . . . B 2 13.193 13.648 -24.805 1 31.32 ? H7 PC8 300 A 1 HETATM 42 H H8 PC8 . . . B 2 13.836 16.222 -25.381 1 71.51 ? H8 PC8 300 A 1 HETATM 43 H H9 PC8 . . . B 2 12.534 17.232 -24.76 1 75.42 ? H9 PC8 300 A 1 HETATM 44 H H10 PC8 . . . B 2 13.152 15.898 -23.787 1 30.21 ? H10 PC8 300 A 1 HETATM 45 H H11 PC8 . . . B 2 10.332 14.066 -24.513 1 62.11 ? H11 PC8 300 A 1 HETATM 46 H H12 PC8 . . . B 2 11.082 15.218 -23.413 1 42.14 ? H12 PC8 300 A 1 HETATM 47 H H13 PC8 . . . B 2 9.942 15.779 -24.631 1 63.4 ? H13 PC8 300 A 1 HETATM 48 H H14 PC8 . . . B 2 6.039 14.571 -27.412 1 25.42 ? H14 PC8 300 A 1 HETATM 49 H H15 PC8 . . . B 2 6.303 13.872 -25.84 1 53.12 ? H15 PC8 300 A 1 HETATM 50 H H16 PC8 . . . B 2 4.616 12.71 -28.088 1 73.25 ? H16 PC8 300 A 1 HETATM 51 H H17 PC8 . . . B 2 3.968 10.873 -26.536 1 72.22 ? H17 PC8 300 A 1 HETATM 52 H H18 PC8 . . . B 2 5.267 11.365 -25.436 1 31.23 ? H18 PC8 300 A 1 HETATM 53 H H19 PC8 . . . B 2 7.394 8.922 -28.53 1 31.12 ? H19 PC8 300 A 1 HETATM 54 H H20 PC8 . . . B 2 8.384 10.38 -28.443 1 54.51 ? H20 PC8 300 A 1 HETATM 55 H H21 PC8 . . . B 2 8.8 7.833 -26.8 1 50.44 ? H21 PC8 300 A 1 HETATM 56 H H22 PC8 . . . B 2 9.74 9.323 -26.59 1 23.34 ? H22 PC8 300 A 1 HETATM 57 H H23 PC8 . . . B 2 11.027 7.788 -27.978 1 71.54 ? H23 PC8 300 A 1 HETATM 58 H H24 PC8 . . . B 2 10.521 9.164 -28.972 1 14.44 ? H24 PC8 300 A 1 HETATM 59 H H25 PC8 . . . B 2 10.264 6.998 -30.181 1 23.23 ? H25 PC8 300 A 1 HETATM 60 H H26 PC8 . . . B 2 8.712 7.831 -29.992 1 24.31 ? H26 PC8 300 A 1 HETATM 61 H H27 PC8 . . . B 2 8.062 6.357 -28.147 1 62.02 ? H27 PC8 300 A 1 HETATM 62 H H28 PC8 . . . B 2 9.665 5.601 -28.12 1 73.15 ? H28 PC8 300 A 1 HETATM 63 H H29 PC8 . . . B 2 8.936 5.146 -30.746 1 11.22 ? H29 PC8 300 A 1 HETATM 64 H H30 PC8 . . . B 2 7.351 5.103 -29.958 1 3.43 ? H30 PC8 300 A 1 HETATM 65 H H31 PC8 . . . B 2 7.864 2.898 -29.605 1 42.53 ? H31 PC8 300 A 1 HETATM 66 H H32 PC8 . . . B 2 9.61 3.156 -29.781 1 54.31 ? H32 PC8 300 A 1 HETATM 67 H H33 PC8 . . . B 2 8.808 3.511 -28.234 1 55.44 ? H33 PC8 300 A 1 HETATM 68 H H34 PC8 . . . B 2 2.034 13.519 -28.194 1 65.22 ? H34 PC8 300 A 1 HETATM 69 H H35 PC8 . . . B 2 0.873 14.063 -26.977 1 43.13 ? H35 PC8 300 A 1 HETATM 70 H H36 PC8 . . . B 2 1.011 11.09 -27.41 1 44.24 ? H36 PC8 300 A 1 HETATM 71 H H37 PC8 . . . B 2 0.378 12.047 -28.762 1 24.25 ? H37 PC8 300 A 1 HETATM 72 H H38 PC8 . . . B 2 -1.627 11.804 -27.652 1 72.53 ? H38 PC8 300 A 1 HETATM 73 H H39 PC8 . . . B 2 -1.029 13.155 -26.675 1 43.32 ? H39 PC8 300 A 1 HETATM 74 H H40 PC8 . . . B 2 0.073 10.739 -25.551 1 50.01 ? H40 PC8 300 A 1 HETATM 75 H H41 PC8 . . . B 2 -1.649 10.443 -25.845 1 43.15 ? H41 PC8 300 A 1 HETATM 76 H H42 PC8 . . . B 2 -2.101 12.672 -24.609 1 74.14 ? H42 PC8 300 A 1 HETATM 77 H H43 PC8 . . . B 2 -0.394 12.651 -24.137 1 31.43 ? H43 PC8 300 A 1 HETATM 78 H H44 PC8 . . . B 2 -1.609 11.682 -22.287 1 51.33 ? H44 PC8 300 A 1 HETATM 79 H H45 PC8 . . . B 2 -0.814 10.329 -23.109 1 13.41 ? H45 PC8 300 A 1 HETATM 80 H H46 PC8 . . . B 2 -2.936 9.408 -22.885 1 42.35 ? H46 PC8 300 A 1 HETATM 81 H H47 PC8 . . . B 2 -3.738 10.989 -22.898 1 71.1 ? H47 PC8 300 A 1 HETATM 82 H H48 PC8 . . . B 2 -3.2 10.261 -24.423 1 2.45 ? H48 PC8 300 A 1 # _model_server_stats.io_time_ms 76 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 67 _model_server_stats.query_time_ms 6324 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 82 #