data_2M3G
#
_model_server_result.job_id            yM96tTkme7GCBw4ddeXhLA 
_model_server_result.datetime_utc      '2025-01-02 18:36:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2m3g 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":301}' 
#
_entry.id    2M3G 
#
_exptl.entry_id    2M3G 
_exptl.method      'SOLID-STATE NMR' 
#
_entity.details                     ? 
_entity.formula_weight              284.436 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            RETINAL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2M3G 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2M3G 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NZ LYS 210 A LYS 210 1_555 D C15 RET . A RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 doub 
covale ? covale2 B NZ LYS 210 B LYS 210 1_555 E C15 RET . B RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 doub 
covale ? covale3 C NZ LYS 210 C LYS 210 1_555 F C15 RET . C RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 doub 
#
_chem_comp.formula           'C20 H28 O' 
_chem_comp.formula_weight    284.436 
_chem_comp.id                RET 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              RETINAL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 RET sing 275 n n 
C1 C6 RET sing 276 n n 
C1 C16 RET sing 277 n n 
C1 C17 RET sing 278 n n 
C2 C3 RET sing 279 n n 
C2 H21 RET sing 280 n n 
C2 H22 RET sing 281 n n 
C3 C4 RET sing 282 n n 
C3 H31 RET sing 283 n n 
C3 H32 RET sing 284 n n 
C4 C5 RET sing 285 n n 
C4 H41 RET sing 286 n n 
C4 H42 RET sing 287 n n 
C5 C6 RET doub 288 n n 
C5 C18 RET sing 289 n n 
C6 C7 RET sing 290 n n 
C7 C8 RET doub 291 e n 
C7 H7 RET sing 292 n n 
C8 C9 RET sing 293 n n 
C8 H8 RET sing 294 n n 
C9 C10 RET doub 295 e n 
C9 C19 RET sing 296 n n 
C10 C11 RET sing 297 n n 
C10 H10 RET sing 298 n n 
C11 C12 RET doub 299 e n 
C11 H11 RET sing 300 n n 
C12 C13 RET sing 301 n n 
C12 H12 RET sing 302 n n 
C13 C14 RET doub 303 e n 
C13 C20 RET sing 304 n n 
C14 C15 RET sing 305 n n 
C14 H14 RET sing 306 n n 
C15 O1 RET doub 307 n n 
C15 H15 RET sing 308 n n 
C16 H161 RET sing 309 n n 
C16 H162 RET sing 310 n n 
C16 H163 RET sing 311 n n 
C17 H171 RET sing 312 n n 
C17 H172 RET sing 313 n n 
C17 H173 RET sing 314 n n 
C18 H181 RET sing 315 n n 
C18 H182 RET sing 316 n n 
C18 H183 RET sing 317 n n 
C19 H191 RET sing 318 n n 
C19 H192 RET sing 319 n n 
C19 H193 RET sing 320 n n 
C20 H201 RET sing 321 n n 
C20 H202 RET sing 322 n n 
C20 H203 RET sing 323 n n 
#
_atom_sites.entry_id                     2M3G 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 RET A 1 301 210 RET LYR . 
E 2 RET B 1 301 210 RET LYR . 
F 2 RET C 1 301 210 RET LYR . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 RET . . . D 2 -16.052 8.799 -7.598 1 5.92 ? C1 RET 301 A 1 
HETATM 2 C C2 RET . . . D 2 -17.013 8.085 -8.551 1 6.78 ? C2 RET 301 A 1 
HETATM 3 C C3 RET . . . D 2 -17.566 6.835 -7.913 1 6.78 ? C3 RET 301 A 1 
HETATM 4 C C4 RET . . . D 2 -18.405 7.203 -6.718 1 6.53 ? C4 RET 301 A 1 
HETATM 5 C C5 RET . . . D 2 -17.583 7.986 -5.707 1 5.74 ? C5 RET 301 A 1 
HETATM 6 C C6 RET . . . D 2 -16.495 8.724 -6.083 1 5.43 ? C6 RET 301 A 1 
HETATM 7 C C7 RET . . . D 2 -15.709 9.462 -5.051 1 4.67 ? C7 RET 301 A 1 
HETATM 8 C C8 RET . . . D 2 -14.614 10.21 -5.316 1 4.32 ? C8 RET 301 A 1 
HETATM 9 C C9 RET . . . D 2 -13.876 10.908 -4.273 1 3.62 ? C9 RET 301 A 1 
HETATM 10 C C10 RET . . . D 2 -12.761 11.668 -4.552 1 3.3 ? C10 RET 301 A 1 
HETATM 11 C C11 RET . . . D 2 -12.035 12.351 -3.546 1 2.71 ? C11 RET 301 A 1 
HETATM 12 C C12 RET . . . D 2 -10.925 13.111 -3.82 1 2.45 ? C12 RET 301 A 1 
HETATM 13 C C13 RET . . . D 2 -10.206 13.785 -2.814 1 2.02 ? C13 RET 301 A 1 
HETATM 14 C C14 RET . . . D 2 -9.071 14.561 -3.109 1 1.86 ? C14 RET 301 A 1 
HETATM 15 C C15 RET . . . D 2 -8.356 15.222 -2.142 1 1.76 ? C15 RET 301 A 1 
HETATM 16 C C16 RET . . . D 2 -15.981 10.248 -8.062 1 6.06 ? C16 RET 301 A 1 
HETATM 17 C C17 RET . . . D 2 -14.678 8.167 -7.772 1 5.59 ? C17 RET 301 A 1 
HETATM 18 C C18 RET . . . D 2 -17.992 7.927 -4.241 1 5.35 ? C18 RET 301 A 1 
HETATM 19 C C19 RET . . . D 2 -14.351 10.792 -2.827 1 3.36 ? C19 RET 301 A 1 
HETATM 20 C C20 RET . . . D 2 -10.672 13.665 -1.364 1 2.05 ? C20 RET 301 A 1 
HETATM 21 H H21 RET . . . D 2 -17.835 8.743 -8.794 1 7.33 ? H21 RET 301 A 1 
HETATM 22 H H22 RET . . . D 2 -16.49 7.811 -9.455 1 6.96 ? H22 RET 301 A 1 
HETATM 23 H H31 RET . . . D 2 -18.178 6.308 -8.63 1 6.85 ? H31 RET 301 A 1 
HETATM 24 H H32 RET . . . D 2 -16.749 6.207 -7.594 1 7.05 ? H32 RET 301 A 1 
HETATM 25 H H41 RET . . . D 2 -19.238 7.806 -7.05 1 6.91 ? H41 RET 301 A 1 
HETATM 26 H H42 RET . . . D 2 -18.776 6.299 -6.261 1 6.61 ? H42 RET 301 A 1 
HETATM 27 H H7 RET . . . D 2 -16.031 9.392 -4.033 1 4.42 ? H7 RET 301 A 1 
HETATM 28 H H8 RET . . . D 2 -14.275 10.29 -6.325 1 4.61 ? H8 RET 301 A 1 
HETATM 29 H H10 RET . . . D 2 -12.433 11.75 -5.567 1 3.59 ? H10 RET 301 A 1 
HETATM 30 H H11 RET . . . D 2 -12.363 12.267 -2.531 1 2.57 ? H11 RET 301 A 1 
HETATM 31 H H12 RET . . . D 2 -10.594 13.196 -4.835 1 2.71 ? H12 RET 301 A 1 
HETATM 32 H H14 RET . . . D 2 -8.752 14.639 -4.128 1 2.03 ? H14 RET 301 A 1 
HETATM 33 H H15 RET . . . D 2 -8.669 15.148 -1.122 1 1.94 ? H15 RET 301 A 1 
HETATM 34 H H161 RET . . . D 2 -16.516 10.356 -8.993 1 6.38 ? H161 RET 301 A 1 
HETATM 35 H H162 RET . . . D 2 -14.949 10.531 -8.204 1 6.12 ? H162 RET 301 A 1 
HETATM 36 H H163 RET . . . D 2 -16.429 10.887 -7.314 1 6.01 ? H163 RET 301 A 1 
HETATM 37 H H171 RET . . . D 2 -14.029 8.854 -8.296 1 5.59 ? H171 RET 301 A 1 
HETATM 38 H H172 RET . . . D 2 -14.77 7.253 -8.34 1 5.56 ? H172 RET 301 A 1 
HETATM 39 H H173 RET . . . D 2 -14.258 7.944 -6.801 1 5.71 ? H173 RET 301 A 1 
HETATM 40 H H181 RET . . . D 2 -18.04 8.929 -3.84 1 5.18 ? H181 RET 301 A 1 
HETATM 41 H H182 RET . . . D 2 -17.264 7.354 -3.687 1 5.38 ? H182 RET 301 A 1 
HETATM 42 H H183 RET . . . D 2 -18.961 7.458 -4.154 1 5.51 ? H183 RET 301 A 1 
HETATM 43 H H191 RET . . . D 2 -15.004 11.62 -2.595 1 3.42 ? H191 RET 301 A 1 
HETATM 44 H H192 RET . . . D 2 -13.499 10.809 -2.164 1 3.47 ? H192 RET 301 A 1 
HETATM 45 H H193 RET . . . D 2 -14.888 9.865 -2.696 1 3.49 ? H193 RET 301 A 1 
HETATM 46 H H201 RET . . . D 2 -10.393 12.696 -0.975 1 2.25 ? H201 RET 301 A 1 
HETATM 47 H H202 RET . . . D 2 -11.745 13.773 -1.322 1 2.19 ? H202 RET 301 A 1 
HETATM 48 H H203 RET . . . D 2 -10.211 14.438 -0.768 1 2.46 ? H203 RET 301 A 1 
#
_model_server_stats.io_time_ms              37 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    188 
_model_server_stats.query_time_ms           2430 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           48 
#