data_2M55 # _model_server_result.job_id ytWD7Z2mqNsymjFk961TtQ _model_server_result.datetime_utc '2024-11-04 20:17:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2m55 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 2M55 # _exptl.entry_id 2M55 _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C ACE 1 B ACE 200 1_555 B N MET 2 B MET 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.304 ? covale ? covale2 B C ALA 20 B ALA 219 1_555 B N NH2 21 B NH2 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.305 ? metalc ? metalc1 A OD1 ASP 20 A ASP 20 1_555 C CA CA . A CA 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.69 ? metalc ? metalc2 A OD2 ASP 22 A ASP 22 1_555 C CA CA . A CA 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.687 ? metalc ? metalc3 A OD2 ASP 24 A ASP 24 1_555 C CA CA . A CA 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.681 ? metalc ? metalc4 A OD1 ASP 24 A ASP 24 1_555 C CA CA . A CA 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.815 ? metalc ? metalc5 A O THR 26 A THR 26 1_555 C CA CA . A CA 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc6 A OE2 GLU 31 A GLU 31 1_555 C CA CA . A CA 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.764 ? metalc ? metalc7 A OE1 GLU 31 A GLU 31 1_555 C CA CA . A CA 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc8 A OD1 ASP 56 A ASP 56 1_555 D CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? metalc ? metalc9 A OD2 ASP 58 A ASP 58 1_555 D CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.655 ? metalc ? metalc10 A OD1 ASP 58 A ASP 58 1_555 D CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc11 A OD1 ASN 60 A ASN 60 1_555 D CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? metalc ? metalc12 A O THR 62 A THR 62 1_555 D CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc13 A OE2 GLU 67 A GLU 67 1_555 D CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.608 ? metalc ? metalc14 A OE1 GLU 67 A GLU 67 1_555 D CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.699 ? metalc ? metalc15 A OD1 ASP 93 A ASP 93 1_555 E CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? metalc ? metalc16 A OD2 ASP 95 A ASP 95 1_555 E CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.696 ? metalc ? metalc17 A OD1 ASN 97 A ASN 97 1_555 E CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.667 ? metalc ? metalc18 A O TYR 99 A TYR 99 1_555 E CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? metalc ? metalc19 A OE2 GLU 104 A GLU 104 1_555 E CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.764 ? metalc ? metalc20 A OE1 GLU 104 A GLU 104 1_555 E CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.706 ? metalc ? metalc21 A OD1 ASP 129 A ASP 129 1_555 F CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc22 A OD1 ASP 131 A ASP 131 1_555 F CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc23 A OD1 ASP 133 A ASP 133 1_555 F CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc24 A O GLN 135 A GLN 135 1_555 F CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? metalc ? metalc25 A OE1 GLU 140 A GLU 140 1_555 F CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc26 A OE2 GLU 140 A GLU 140 1_555 F CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.711 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2M55 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 300 300 CA CA . D 3 CA A 1 301 301 CA CA . E 3 CA A 1 302 302 CA CA . F 3 CA A 1 303 303 CA CA . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 22.521 _atom_site.Cartn_y 101.39 _atom_site.Cartn_z -197.384 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 0 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 264 _model_server_stats.query_time_ms 6344 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #