data_2M5P
#
_model_server_result.job_id            2Ju22KECIGH6WMUwol0Q5g 
_model_server_result.datetime_utc      '2024-11-09 02:35:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2m5p 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":101}' 
#
_entry.id    2M5P 
#
_exptl.entry_id    2M5P 
_exptl.method      'SOLUTION NMR' 
#
_entity.details                     ? 
_entity.formula_weight              147.129 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'GAMMA-L-GLUTAMIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2M5P 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2M5P 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C HIS 1 X HIS 1 1_555 A N AIB 2 X AIB 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? 
covale ? covale2 A C AIB 2 X AIB 2 1_555 A N GLN 3 X GLN 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? 
covale ? covale3 A NZ LYS 13 X LYS 13 1_555 B CD GGL . X GGL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale4 A C ASP 15 X ASP 15 1_555 A N AIB 16 X AIB 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale5 A C AIB 16 X AIB 16 1_555 A N ARG 17 X ARG 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale6 A C THR 29 X THR 29 1_555 A N NH2 30 X NH2 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.22 ? 
covale ? covale7 B N GGL . X GGL 101 1_555 C CD GGL . X GGL 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? 
covale ? covale8 C N GGL . X GGL 102 1_555 D C1 PLM . X PLM 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
#
_chem_comp.formula           'C5 H9 N O4' 
_chem_comp.formula_weight    147.129 
_chem_comp.id                GGL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'GAMMA-L-GLUTAMIC ACID' 
_chem_comp.type              'l-gamma-peptide, c-delta linking' 
_chem_comp.pdbx_synonyms     'L-GLUTAMIC ACID' 
#
_atom_sites.entry_id                     2M5P 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GGL X 1 101 13 GGL LYX . 
C 2 GGL X 1 102 13 GGL LYX . 
D 3 PLM X 1 103 13 PLM LYX . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N GGL . . . B 2 30.26 -22.247 -4.924 1 0 ? N GGL 101 X 1 
HETATM 2 C CA GGL . . . B 2 31.122 -23.417 -4.884 1 0 ? CA GGL 101 X 1 
HETATM 3 C C GGL . . . B 2 30.619 -24.415 -3.842 1 0 ? C GGL 101 X 1 
HETATM 4 O O GGL . . . B 2 31.36 -25.336 -3.538 1 0 ? O GGL 101 X 1 
HETATM 5 C CB GGL . . . B 2 32.557 -22.986 -4.551 1 0 ? CB GGL 101 X 1 
HETATM 6 C CG GGL . . . B 2 32.539 -21.63 -3.839 1 0 ? CG GGL 101 X 1 
HETATM 7 C CD GGL . . . B 2 32.455 -20.494 -4.856 1 0 ? CD GGL 101 X 1 
HETATM 8 O OE1 GGL . . . B 2 31.667 -20.553 -5.799 1 0 ? OE1 GGL 101 X 1 
HETATM 9 O OXT GGL . . . B 2 29.431 -24.394 -3.571 1 0 ? OXT GGL 101 X 1 
HETATM 10 H H GGL . . . B 2 30.583 -21.395 -4.55 1 0 ? H GGL 101 X 1 
HETATM 11 H HA GGL . . . B 2 31.117 -23.89 -5.853 1 0 ? HA GGL 101 X 1 
HETATM 12 H HB2 GGL . . . B 2 33.012 -23.721 -3.906 1 0 ? HB2 GGL 101 X 1 
HETATM 13 H HB3 GGL . . . B 2 33.127 -22.903 -5.462 1 0 ? HB3 GGL 101 X 1 
HETATM 14 H HG2 GGL . . . B 2 33.438 -21.516 -3.257 1 0 ? HG2 GGL 101 X 1 
HETATM 15 H HG3 GGL . . . B 2 31.691 -21.596 -3.172 1 0 ? HG3 GGL 101 X 1 
#
_model_server_stats.io_time_ms              5 
_model_server_stats.parse_time_ms           4 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           2484 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           15 
#