data_2M5Q # _model_server_result.job_id DkTq4zBEPajFIe81AdaiFw _model_server_result.datetime_utc '2025-01-02 18:41:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2m5q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":102}' # _entry.id 2M5Q # _exptl.entry_id 2M5Q _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 147.129 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'GAMMA-L-GLUTAMIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C HIS 1 X HIS 1 1_555 A N AIB 2 X AIB 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C AIB 2 X AIB 2 1_555 A N GLN 3 X GLN 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 A NZ LYS 13 X LYS 13 1_555 B CD GGL . X GGL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C ASP 15 X ASP 15 1_555 A N AIB 16 X AIB 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 A C AIB 16 X AIB 16 1_555 A N ARG 17 X ARG 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 A C THR 29 X THR 29 1_555 A N NH2 30 X NH2 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.304 ? covale ? covale7 B N GGL . X GGL 101 1_555 C CD GGL . X GGL 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale8 C N GGL . X GGL 102 1_555 D C1 PLM . X PLM 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C5 H9 N O4' _chem_comp.formula_weight 147.129 _chem_comp.id GGL _chem_comp.mon_nstd_flag . _chem_comp.name 'GAMMA-L-GLUTAMIC ACID' _chem_comp.type 'l-gamma-peptide, c-delta linking' _chem_comp.pdbx_synonyms 'L-GLUTAMIC ACID' # _atom_sites.entry_id 2M5Q _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GGL X 1 101 101 GGL GGL . C 2 GGL X 1 102 102 GGL GGL . D 3 PLM X 1 103 103 PLM PLM . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N GGL . . . C 2 29.502 13.683 -10.98 1 0 ? N GGL 102 X 1 HETATM 2 C CA GGL . . . C 2 30.673 14.476 -11.34 1 0 ? CA GGL 102 X 1 HETATM 3 C C GGL . . . C 2 31.677 13.629 -12.114 1 0 ? C GGL 102 X 1 HETATM 4 O O GGL . . . C 2 31.262 12.642 -12.698 1 0 ? O GGL 102 X 1 HETATM 5 C CB GGL . . . C 2 31.339 15.035 -10.081 1 0 ? CB GGL 102 X 1 HETATM 6 C CG GGL . . . C 2 30.376 14.939 -8.894 1 0 ? CG GGL 102 X 1 HETATM 7 C CD GGL . . . C 2 30.266 13.492 -8.426 1 0 ? CD GGL 102 X 1 HETATM 8 O OE1 GGL . . . C 2 29.172 13 -8.15 1 0 ? OE1 GGL 102 X 1 HETATM 9 O OXT GGL . . . C 2 32.833 14.012 -12.161 1 0 ? OXT GGL 102 X 1 HETATM 10 H H GGL . . . C 2 29.592 12.969 -10.315 1 0 ? H GGL 102 X 1 HETATM 11 H HA GGL . . . C 2 30.358 15.3 -11.962 1 0 ? HA GGL 102 X 1 HETATM 12 H HB2 GGL . . . C 2 32.232 14.467 -9.865 1 0 ? HB2 GGL 102 X 1 HETATM 13 H HB3 GGL . . . C 2 31.604 16.07 -10.244 1 0 ? HB3 GGL 102 X 1 HETATM 14 H HG2 GGL . . . C 2 30.747 15.55 -8.084 1 0 ? HG2 GGL 102 X 1 HETATM 15 H HG3 GGL . . . C 2 29.402 15.296 -9.193 1 0 ? HG3 GGL 102 X 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 3098 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 15 #