data_2M6Z # _model_server_result.job_id Ak1xXWy1SCrpAPGtkBopOg _model_server_result.datetime_utc '2024-10-14 04:27:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2m6z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":201}' # _entry.id 2M6Z # _exptl.entry_id 2M6Z _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 616.487 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PROTOPORPHYRIN IX CONTAINING FE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B NE2 HIS 92 B HIS 92 1_555 F FE HEM . B HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc2 D NE2 HIS 92 D HIS 92 1_555 H FE HEM . D HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? # _chem_comp.formula 'C34 H32 Fe N4 O4' _chem_comp.formula_weight 616.487 _chem_comp.id HEM _chem_comp.mon_nstd_flag . _chem_comp.name 'PROTOPORPHYRIN IX CONTAINING FE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEME # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A HEM sing 129 n n CHA C4D HEM doub 130 n n CHA HHA HEM sing 131 n n CHB C4A HEM sing 132 n n CHB C1B HEM doub 133 n n CHB HHB HEM sing 134 n n CHC C4B HEM sing 135 n n CHC C1C HEM doub 136 n n CHC HHC HEM sing 137 n n CHD C4C HEM doub 138 n n CHD C1D HEM sing 139 n n CHD HHD HEM sing 140 n n C1A C2A HEM doub 141 n y C1A NA HEM sing 142 n y C2A C3A HEM sing 143 n y C2A CAA HEM sing 144 n n C3A C4A HEM doub 145 n y C3A CMA HEM sing 146 n n C4A NA HEM sing 147 n y CMA HMA HEM sing 148 n n CMA HMAA HEM sing 149 n n CMA HMAB HEM sing 150 n n CAA CBA HEM sing 151 n n CAA HAA HEM sing 152 n n CAA HAAA HEM sing 153 n n CBA CGA HEM sing 154 n n CBA HBA HEM sing 155 n n CBA HBAA HEM sing 156 n n CGA O1A HEM doub 157 n n CGA O2A HEM sing 158 n n C1B C2B HEM sing 159 n n C1B NB HEM sing 160 n n C2B C3B HEM doub 161 n n C2B CMB HEM sing 162 n n C3B C4B HEM sing 163 n n C3B CAB HEM sing 164 n n C4B NB HEM doub 165 n n CMB HMB HEM sing 166 n n CMB HMBA HEM sing 167 n n CMB HMBB HEM sing 168 n n CAB CBB HEM doub 169 n n CAB HAB HEM sing 170 n n CBB HBB HEM sing 171 n n CBB HBBA HEM sing 172 n n C1C C2C HEM sing 173 n y C1C NC HEM sing 174 n y C2C C3C HEM doub 175 n y C2C CMC HEM sing 176 n n C3C C4C HEM sing 177 n y C3C CAC HEM sing 178 n n C4C NC HEM sing 179 n y CMC HMC HEM sing 180 n n CMC HMCA HEM sing 181 n n CMC HMCB HEM sing 182 n n CAC CBC HEM doub 183 n n CAC HAC HEM sing 184 n n CBC HBC HEM sing 185 n n CBC HBCA HEM sing 186 n n C1D C2D HEM sing 187 n n C1D ND HEM doub 188 n n C2D C3D HEM doub 189 n n C2D CMD HEM sing 190 n n C3D C4D HEM sing 191 n n C3D CAD HEM sing 192 n n C4D ND HEM sing 193 n n CMD HMD HEM sing 194 n n CMD HMDA HEM sing 195 n n CMD HMDB HEM sing 196 n n CAD CBD HEM sing 197 n n CAD HAD HEM sing 198 n n CAD HADA HEM sing 199 n n CBD CGD HEM sing 200 n n CBD HBD HEM sing 201 n n CBD HBDA HEM sing 202 n n CGD O1D HEM doub 203 n n CGD O2D HEM sing 204 n n O2A H2A HEM sing 205 n n O2D H2D HEM sing 206 n n FE NA HEM sing 207 n n FE NB HEM sing 208 n n FE NC HEM sing 209 n n FE ND HEM sing 210 n n # _atom_sites.entry_id 2M6Z _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HEM A 1 201 201 HEM HEC . F 3 HEM B 1 201 201 HEM HEC . G 3 HEM C 1 201 201 HEM HEC . H 3 HEM D 1 201 201 HEM HEC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA HEM . . . H 3 423.908 10.677 0.809 1 0 ? CHA HEM 201 D 1 HETATM 2 C CHB HEM . . . H 3 423.211 6.164 -0.835 1 0 ? CHB HEM 201 D 1 HETATM 3 C CHC HEM . . . H 3 423.681 4.426 3.677 1 0 ? CHC HEM 201 D 1 HETATM 4 C CHD HEM . . . H 3 424.76 8.898 5.267 1 0 ? CHD HEM 201 D 1 HETATM 5 C C1A HEM . . . H 3 423.542 9.617 -0.03 1 0 ? C1A HEM 201 D 1 HETATM 6 C C2A HEM . . . H 3 423.252 9.717 -1.459 1 0 ? C2A HEM 201 D 1 HETATM 7 C C3A HEM . . . H 3 422.953 8.459 -1.888 1 0 ? C3A HEM 201 D 1 HETATM 8 C C4A HEM . . . H 3 423.175 7.562 -0.766 1 0 ? C4A HEM 201 D 1 HETATM 9 C CMA HEM . . . H 3 422.512 8.046 -3.272 1 0 ? CMA HEM 201 D 1 HETATM 10 C CAA HEM . . . H 3 423.264 10.987 -2.292 1 0 ? CAA HEM 201 D 1 HETATM 11 C CBA HEM . . . H 3 424.37 11.047 -3.363 1 0 ? CBA HEM 201 D 1 HETATM 12 C CGA HEM . . . H 3 424.668 12.428 -3.949 1 0 ? CGA HEM 201 D 1 HETATM 13 O O1A HEM . . . H 3 425.686 12.534 -4.651 1 0 ? O1A HEM 201 D 1 HETATM 14 O O2A HEM . . . H 3 423.869 13.371 -3.709 1 0 ? O2A HEM 201 D 1 HETATM 15 C C1B HEM . . . H 3 423.36 5.285 0.236 1 0 ? C1B HEM 201 D 1 HETATM 16 C C2B HEM . . . H 3 423.245 3.842 0.148 1 0 ? C2B HEM 201 D 1 HETATM 17 C C3B HEM . . . H 3 423.188 3.376 1.421 1 0 ? C3B HEM 201 D 1 HETATM 18 C C4B HEM . . . H 3 423.471 4.499 2.297 1 0 ? C4B HEM 201 D 1 HETATM 19 C CMB HEM . . . H 3 423.173 3.043 -1.13 1 0 ? CMB HEM 201 D 1 HETATM 20 C CAB HEM . . . H 3 422.944 1.954 1.855 1 0 ? CAB HEM 201 D 1 HETATM 21 C CBB HEM . . . H 3 423.949 1.228 2.354 1 0 ? CBB HEM 201 D 1 HETATM 22 C C1C HEM . . . H 3 423.926 5.505 4.534 1 0 ? C1C HEM 201 D 1 HETATM 23 C C2C HEM . . . H 3 424.017 5.445 5.986 1 0 ? C2C HEM 201 D 1 HETATM 24 C C3C HEM . . . H 3 424.383 6.682 6.416 1 0 ? C3C HEM 201 D 1 HETATM 25 C C4C HEM . . . H 3 424.46 7.534 5.245 1 0 ? C4C HEM 201 D 1 HETATM 26 C CMC HEM . . . H 3 423.683 4.252 6.851 1 0 ? CMC HEM 201 D 1 HETATM 27 C CAC HEM . . . H 3 424.561 7.152 7.84 1 0 ? CAC HEM 201 D 1 HETATM 28 C CBC HEM . . . H 3 425.499 6.605 8.631 1 0 ? CBC HEM 201 D 1 HETATM 29 C C1D HEM . . . H 3 424.654 9.781 4.185 1 0 ? C1D HEM 201 D 1 HETATM 30 C C2D HEM . . . H 3 424.818 11.222 4.266 1 0 ? C2D HEM 201 D 1 HETATM 31 C C3D HEM . . . H 3 424.499 11.732 3.042 1 0 ? C3D HEM 201 D 1 HETATM 32 C C4D HEM . . . H 3 424.212 10.597 2.173 1 0 ? C4D HEM 201 D 1 HETATM 33 C CMD HEM . . . H 3 425.217 11.974 5.51 1 0 ? CMD HEM 201 D 1 HETATM 34 C CAD HEM . . . H 3 424.432 13.188 2.63 1 0 ? CAD HEM 201 D 1 HETATM 35 C CBD HEM . . . H 3 425.759 13.745 2.102 1 0 ? CBD HEM 201 D 1 HETATM 36 C CGD HEM . . . H 3 425.609 15.072 1.372 1 0 ? CGD HEM 201 D 1 HETATM 37 O O1D HEM . . . H 3 425.847 16.118 2.02 1 0 ? O1D HEM 201 D 1 HETATM 38 O O2D HEM . . . H 3 425.284 15.037 0.171 1 0 ? O2D HEM 201 D 1 HETATM 39 N NA HEM . . . H 3 423.412 8.298 0.382 1 0 ? NA HEM 201 D 1 HETATM 40 N NB HEM . . . H 3 423.537 5.664 1.554 1 0 ? NB HEM 201 D 1 HETATM 41 N NC HEM . . . H 3 424.091 6.818 4.118 1 0 ? NC HEM 201 D 1 HETATM 42 N ND HEM . . . H 3 424.288 9.42 2.898 1 0 ? ND HEM 201 D 1 HETATM 43 FE FE HEM . . . H 3 423.888 7.543 2.229 1 0 ? FE HEM 201 D 1 HETATM 44 H HHB HEM . . . H 3 423.117 5.723 -1.817 1 0 ? HHB HEM 201 D 1 HETATM 45 H HHC HEM . . . H 3 423.65 3.443 4.124 1 0 ? HHC HEM 201 D 1 HETATM 46 H HHD HEM . . . H 3 425.106 9.309 6.204 1 0 ? HHD HEM 201 D 1 HETATM 47 H HMA HEM . . . H 3 421.428 7.945 -3.295 1 0 ? HMA HEM 201 D 1 HETATM 48 H HMAA HEM . . . H 3 422.973 7.092 -3.531 1 0 ? HMAA HEM 201 D 1 HETATM 49 H HMAB HEM . . . H 3 422.822 8.803 -3.993 1 0 ? HMAB HEM 201 D 1 HETATM 50 H HAA HEM . . . H 3 422.301 11.072 -2.795 1 0 ? HAA HEM 201 D 1 HETATM 51 H HAAA HEM . . . H 3 423.381 11.839 -1.624 1 0 ? HAAA HEM 201 D 1 HETATM 52 H HBA HEM . . . H 3 424.075 10.395 -4.184 1 0 ? HBA HEM 201 D 1 HETATM 53 H HBAA HEM . . . H 3 425.289 10.654 -2.927 1 0 ? HBAA HEM 201 D 1 HETATM 54 H HMB HEM . . . H 3 423.177 1.979 -0.895 1 0 ? HMB HEM 201 D 1 HETATM 55 H HMBA HEM . . . H 3 424.034 3.28 -1.756 1 0 ? HMBA HEM 201 D 1 HETATM 56 H HMBB HEM . . . H 3 422.257 3.295 -1.665 1 0 ? HMBB HEM 201 D 1 HETATM 57 H HAB HEM . . . H 3 421.958 1.523 1.765 1 0 ? HAB HEM 201 D 1 HETATM 58 H HBB HEM . . . H 3 424.934 1.66 2.443 1 0 ? HBB HEM 201 D 1 HETATM 59 H HBBA HEM . . . H 3 423.776 0.209 2.665 1 0 ? HBBA HEM 201 D 1 HETATM 60 H HMC HEM . . . H 3 424.396 4.188 7.673 1 0 ? HMC HEM 201 D 1 HETATM 61 H HMCA HEM . . . H 3 422.675 4.365 7.252 1 0 ? HMCA HEM 201 D 1 HETATM 62 H HMCB HEM . . . H 3 423.736 3.344 6.252 1 0 ? HMCB HEM 201 D 1 HETATM 63 H HAC HEM . . . H 3 423.929 7.938 8.227 1 0 ? HAC HEM 201 D 1 HETATM 64 H HBC HEM . . . H 3 426.135 5.82 8.251 1 0 ? HBC HEM 201 D 1 HETATM 65 H HBCA HEM . . . H 3 425.616 6.952 9.648 1 0 ? HBCA HEM 201 D 1 HETATM 66 H HMD HEM . . . H 3 425.3 13.037 5.281 1 0 ? HMD HEM 201 D 1 HETATM 67 H HMDA HEM . . . H 3 424.465 11.826 6.283 1 0 ? HMDA HEM 201 D 1 HETATM 68 H HMDB HEM . . . H 3 426.18 11.603 5.865 1 0 ? HMDB HEM 201 D 1 HETATM 69 H HAD HEM . . . H 3 424.136 13.777 3.497 1 0 ? HAD HEM 201 D 1 HETATM 70 H HADA HEM . . . H 3 423.674 13.299 1.855 1 0 ? HADA HEM 201 D 1 HETATM 71 H HBD HEM . . . H 3 426.434 13.89 2.945 1 0 ? HBD HEM 201 D 1 HETATM 72 H HBDA HEM . . . H 3 426.2 13.016 1.421 1 0 ? HBDA HEM 201 D 1 HETATM 73 H HHA HEM . . . H 3 423.958 11.659 0.359 1 0 ? HHA HEM 201 D 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 194 _model_server_stats.query_time_ms 5239 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 73 #