data_2M9F
#
_model_server_result.job_id            N8TOOs6Obd8U4Qd7eMyzrA 
_model_server_result.datetime_utc      '2024-12-27 02:44:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2m9f 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":101}' 
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_entry.id    2M9F 
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_exptl.entry_id    2M9F 
_exptl.method      'SOLUTION NMR' 
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_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
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_pdbx_struct_assembly_gen.asym_id_list       A,B 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            ND2 
_struct_conn.ptnr1_label_comp_id            ASN 
_struct_conn.ptnr1_label_seq_id             13 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             ASN 
_struct_conn.ptnr1_auth_seq_id              13 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            C1 
_struct_conn.ptnr2_label_comp_id            NAG 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             NAG 
_struct_conn.ptnr2_auth_seq_id              101 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.451 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 207 n n 
C1 O1 NAG sing 208 n n 
C1 O5 NAG sing 209 n n 
C1 H1 NAG sing 210 n n 
C2 C3 NAG sing 211 n n 
C2 N2 NAG sing 212 n n 
C2 H2 NAG sing 213 n n 
C3 C4 NAG sing 214 n n 
C3 O3 NAG sing 215 n n 
C3 H3 NAG sing 216 n n 
C4 C5 NAG sing 217 n n 
C4 O4 NAG sing 218 n n 
C4 H4 NAG sing 219 n n 
C5 C6 NAG sing 220 n n 
C5 O5 NAG sing 221 n n 
C5 H5 NAG sing 222 n n 
C6 O6 NAG sing 223 n n 
C6 H61 NAG sing 224 n n 
C6 H62 NAG sing 225 n n 
C7 C8 NAG sing 226 n n 
C7 N2 NAG sing 227 n n 
C7 O7 NAG doub 228 n n 
C8 H81 NAG sing 229 n n 
C8 H82 NAG sing 230 n n 
C8 H83 NAG sing 231 n n 
N2 HN2 NAG sing 232 n n 
O1 HO1 NAG sing 233 n n 
O3 HO3 NAG sing 234 n n 
O4 HO4 NAG sing 235 n n 
O6 HO6 NAG sing 236 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     2M9F 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          B 
_pdbx_nonpoly_scheme.entity_id        2 
_pdbx_nonpoly_scheme.mon_id           NAG 
_pdbx_nonpoly_scheme.pdb_strand_id    A 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      101 
_pdbx_nonpoly_scheme.auth_seq_num     34 
_pdbx_nonpoly_scheme.pdb_mon_id       NAG 
_pdbx_nonpoly_scheme.auth_mon_id      NAG 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . B 2 12.599 0.904 -0.518 1 0 ? C1 NAG 101 A 1 
HETATM 2 C C2 NAG . . . B 2 12.188 2.328 -0.95 1 0 ? C2 NAG 101 A 1 
HETATM 3 C C3 NAG . . . B 2 10.984 2.181 -1.889 1 0 ? C3 NAG 101 A 1 
HETATM 4 C C4 NAG . . . B 2 11.376 1.353 -3.116 1 0 ? C4 NAG 101 A 1 
HETATM 5 C C5 NAG . . . B 2 11.861 -0.033 -2.663 1 0 ? C5 NAG 101 A 1 
HETATM 6 C C6 NAG . . . B 2 12.316 -0.973 -3.775 1 0 ? C6 NAG 101 A 1 
HETATM 7 C C7 NAG . . . B 2 12.787 3.813 0.914 1 0 ? C7 NAG 101 A 1 
HETATM 8 C C8 NAG . . . B 2 12.268 4.826 1.94 1 0 ? C8 NAG 101 A 1 
HETATM 9 N N2 NAG . . . B 2 11.863 3.179 0.195 1 0 ? N2 NAG 101 A 1 
HETATM 10 O O3 NAG . . . B 2 10.522 3.463 -2.354 1 0 ? O3 NAG 101 A 1 
HETATM 11 O O4 NAG . . . B 2 10.2 1.226 -3.942 1 0 ? O4 NAG 101 A 1 
HETATM 12 O O5 NAG . . . B 2 12.986 0.155 -1.721 1 0 ? O5 NAG 101 A 1 
HETATM 13 O O6 NAG . . . B 2 13.42 -0.366 -4.457 1 0 ? O6 NAG 101 A 1 
HETATM 14 O O7 NAG . . . B 2 13.987 3.58 0.771 1 0 ? O7 NAG 101 A 1 
HETATM 15 H H1 NAG . . . B 2 11.768 0.398 -0.028 1 0 ? H1 NAG 101 A 1 
HETATM 16 H H2 NAG . . . B 2 13.016 2.788 -1.492 1 0 ? H2 NAG 101 A 1 
HETATM 17 H H3 NAG . . . B 2 10.172 1.681 -1.355 1 0 ? H3 NAG 101 A 1 
HETATM 18 H H4 NAG . . . B 2 12.156 1.867 -3.679 1 0 ? H4 NAG 101 A 1 
HETATM 19 H H5 NAG . . . B 2 11.054 -0.518 -2.131 1 0 ? H5 NAG 101 A 1 
HETATM 20 H H61 NAG . . . B 2 12.636 -1.925 -3.351 1 0 ? H61 NAG 101 A 1 
HETATM 21 H H62 NAG . . . B 2 11.5 -1.165 -4.471 1 0 ? H62 NAG 101 A 1 
HETATM 22 H H81 NAG . . . B 2 11.409 5.365 1.54 1 0 ? H81 NAG 101 A 1 
HETATM 23 H H82 NAG . . . B 2 13.055 5.543 2.175 1 0 ? H82 NAG 101 A 1 
HETATM 24 H H83 NAG . . . B 2 11.983 4.304 2.853 1 0 ? H83 NAG 101 A 1 
HETATM 25 H HN2 NAG . . . B 2 10.878 3.371 0.373 1 0 ? HN2 NAG 101 A 1 
HETATM 26 H HO3 NAG . . . B 2 9.942 3.29 -3.106 1 0 ? HO3 NAG 101 A 1 
HETATM 27 H HO4 NAG . . . B 2 10.449 0.842 -4.79 1 0 ? HO4 NAG 101 A 1 
HETATM 28 H HO6 NAG . . . B 2 14.113 -0.202 -3.808 1 0 ? HO6 NAG 101 A 1 
#
_model_server_stats.io_time_ms              68 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    41 
_model_server_stats.query_time_ms           5508 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           28 
#