data_2MPA # _model_server_result.job_id Bxks8QzaWpGx9gauI-e59w _model_server_result.datetime_utc '2024-11-22 07:43:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2mpa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":220}' # _entry.id 2MPA # _exptl.entry_id 2MPA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.01 _cell.angle_gamma 90 _cell.entry_id 2MPA _cell.length_a 55.68 _cell.length_b 69.1 _cell.length_c 72.95 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2MPA _symmetry.cell_setting monoclinic _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 93 L CYS 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf2 A SG CYS 139 L CYS 139 1_555 A SG CYS 199 L CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf3 A SG CYS 219 L CYS 219 1_555 B SG CYS 136 H CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf4 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf5 B SG CYS 148 H CYS 148 1_555 B SG CYS 203 H CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? covale ? covale1 C C THC 1 P THC 1 1_555 C N LYS 2 P LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 C C LEU 8 P LEU 8 1_555 C N CYF 9 P CYF 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? metalc ? metalc1 A ND1 HIS 98 L HIS 98 1_555 D CD CD . L CD 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.737 ? metalc ? metalc2 D CD CD . L CD 220 1_555 E O HOH . L HOH 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2MPA _atom_sites.fract_transf_matrix[1][1] 0.01796 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00726 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014472 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014786 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CD L 1 220 1 CD CD . E 5 HOH L 1 221 2 HOH HOH . E 5 HOH L 2 222 4 HOH HOH . E 5 HOH L 3 223 5 HOH HOH . E 5 HOH L 4 224 6 HOH HOH . E 5 HOH L 5 225 7 HOH HOH . E 5 HOH L 6 226 8 HOH HOH . E 5 HOH L 7 227 12 HOH HOH . E 5 HOH L 8 228 16 HOH HOH . E 5 HOH L 9 229 19 HOH HOH . E 5 HOH L 10 230 21 HOH HOH . E 5 HOH L 11 231 24 HOH HOH . E 5 HOH L 12 232 26 HOH HOH . E 5 HOH L 13 233 27 HOH HOH . E 5 HOH L 14 234 28 HOH HOH . E 5 HOH L 15 235 29 HOH HOH . E 5 HOH L 16 236 31 HOH HOH . E 5 HOH L 17 237 32 HOH HOH . E 5 HOH L 18 238 34 HOH HOH . E 5 HOH L 19 239 37 HOH HOH . E 5 HOH L 20 240 40 HOH HOH . E 5 HOH L 21 241 42 HOH HOH . E 5 HOH L 22 242 45 HOH HOH . E 5 HOH L 23 243 51 HOH HOH . E 5 HOH L 24 244 52 HOH HOH . F 5 HOH H 1 226 1 HOH HOH . F 5 HOH H 2 227 3 HOH HOH . F 5 HOH H 3 228 9 HOH HOH . F 5 HOH H 4 229 10 HOH HOH . F 5 HOH H 5 230 11 HOH HOH . F 5 HOH H 6 231 13 HOH HOH . F 5 HOH H 7 232 14 HOH HOH . F 5 HOH H 8 233 15 HOH HOH . F 5 HOH H 9 234 17 HOH HOH . F 5 HOH H 10 235 18 HOH HOH . F 5 HOH H 11 236 20 HOH HOH . F 5 HOH H 12 237 22 HOH HOH . F 5 HOH H 13 238 23 HOH HOH . F 5 HOH H 14 239 25 HOH HOH . F 5 HOH H 15 240 35 HOH HOH . F 5 HOH H 16 241 36 HOH HOH . F 5 HOH H 17 242 38 HOH HOH . F 5 HOH H 18 243 39 HOH HOH . F 5 HOH H 19 244 43 HOH HOH . F 5 HOH H 20 245 44 HOH HOH . F 5 HOH H 21 246 46 HOH HOH . F 5 HOH H 22 247 47 HOH HOH . F 5 HOH H 23 248 48 HOH HOH . F 5 HOH H 24 249 49 HOH HOH . F 5 HOH H 25 250 50 HOH HOH . G 5 HOH P 1 30 30 HOH HOH . G 5 HOH P 2 33 33 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -7.894 _atom_site.Cartn_y -5.008 _atom_site.Cartn_z 46.688 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 67.22 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 220 _atom_site.auth_asym_id L _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #