data_2MSD
#
_model_server_result.job_id            iv0sqrMpeMyEvnTe5V0X2g 
_model_server_result.datetime_utc      '2024-11-04 20:18:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2msd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"FC","auth_seq_id":201}' 
#
_entry.id    2MSD 
#
_exptl.entry_id    2MSD 
_exptl.method      'SOLUTION NMR' 
#
_entity.details                     ? 
_entity.formula_weight              522.196 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC,DC,EC,FC,GC 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             FC 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C10 H17 N6 O13 P3' 
_chem_comp.formula_weight    522.196 
_chem_comp.id                GNP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G GNP doub 260 n n 
PG O2G GNP sing 261 n n 
PG O3G GNP sing 262 n n 
PG N3B GNP sing 263 n n 
O2G HOG2 GNP sing 264 n n 
O3G HOG3 GNP sing 265 n n 
N3B PB GNP sing 266 n n 
N3B HNB3 GNP sing 267 n n 
PB O1B GNP doub 268 n n 
PB O2B GNP sing 269 n n 
PB O3A GNP sing 270 n n 
O2B HOB2 GNP sing 271 n n 
O3A PA GNP sing 272 n n 
PA O1A GNP doub 273 n n 
PA O2A GNP sing 274 n n 
PA O5' GNP sing 275 n n 
O2A HOA2 GNP sing 276 n n 
O5' C5' GNP sing 277 n n 
C5' C4' GNP sing 278 n n 
C5' "H5'2" GNP sing 279 n n 
C5' "H5'1" GNP sing 280 n n 
C4' O4' GNP sing 281 n n 
C4' C3' GNP sing 282 n n 
C4' H4' GNP sing 283 n n 
O4' C1' GNP sing 284 n n 
C3' O3' GNP sing 285 n n 
C3' C2' GNP sing 286 n n 
C3' H3' GNP sing 287 n n 
O3' HO3' GNP sing 288 n n 
C2' O2' GNP sing 289 n n 
C2' C1' GNP sing 290 n n 
C2' H2' GNP sing 291 n n 
O2' HO2' GNP sing 292 n n 
C1' N9 GNP sing 293 n n 
C1' H1' GNP sing 294 n n 
N9 C8 GNP sing 295 n y 
N9 C4 GNP sing 296 n y 
C8 N7 GNP doub 297 n y 
C8 H8 GNP sing 298 n n 
N7 C5 GNP sing 299 n y 
C5 C6 GNP sing 300 n y 
C5 C4 GNP doub 301 n y 
C6 O6 GNP doub 302 n n 
C6 N1 GNP sing 303 n y 
N1 C2 GNP sing 304 n y 
N1 HN1 GNP sing 305 n n 
C2 N2 GNP sing 306 n n 
C2 N3 GNP doub 307 n y 
N2 HN21 GNP sing 308 n n 
N2 HN22 GNP sing 309 n n 
N3 C4 GNP sing 310 n y 
#
_atom_sites.entry_id                     2MSD 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 PCW A 1 1 1 PCW PCW . 
E 3 PCW A 1 2 2 PCW PCW . 
F 3 PCW A 1 3 3 PCW PCW . 
G 3 PCW A 1 4 4 PCW PCW . 
H 3 PCW A 1 5 5 PCW PCW . 
I 3 PCW A 1 6 6 PCW PCW . 
J 3 PCW A 1 7 7 PCW PCW . 
K 3 PCW A 1 8 8 PCW PCW . 
L 3 PCW A 1 9 9 PCW PCW . 
M 3 PCW A 1 10 10 PCW PCW . 
N 3 PCW A 1 11 11 PCW PCW . 
O 3 PCW A 1 12 12 PCW PCW . 
P 3 PCW A 1 13 13 PCW PCW . 
Q 3 PCW A 1 14 14 PCW PCW . 
R 3 PCW A 1 15 15 PCW PCW . 
S 3 PCW A 1 16 16 PCW PCW . 
T 3 PCW A 1 17 17 PCW PCW . 
U 3 PCW A 1 18 18 PCW PCW . 
V 3 PCW A 1 19 19 PCW PCW . 
W 3 PCW A 1 20 20 PCW PCW . 
X 3 PCW A 1 21 21 PCW PCW . 
Y 3 PCW A 1 22 22 PCW PCW . 
Z 3 PCW A 1 23 23 PCW PCW . 
AA 3 PCW A 1 24 24 PCW PCW . 
BA 3 PCW A 1 25 25 PCW PCW . 
CA 3 PCW A 1 26 26 PCW PCW . 
DA 3 PCW A 1 27 27 PCW PCW . 
EA 3 PCW A 1 28 28 PCW PCW . 
FA 3 PCW A 1 29 29 PCW PCW . 
GA 3 PCW A 1 30 30 PCW PCW . 
HA 3 PCW A 1 31 31 PCW PCW . 
IA 3 PCW A 1 32 32 PCW PCW . 
JA 4 17F A 1 33 33 17F 17F . 
KA 4 17F A 1 34 34 17F 17F . 
LA 4 17F A 1 35 35 17F 17F . 
MA 4 17F A 1 36 36 17F 17F . 
NA 4 17F A 1 37 37 17F 17F . 
OA 4 17F A 1 38 38 17F 17F . 
PA 4 17F A 1 39 39 17F 17F . 
QA 4 17F A 1 40 40 17F 17F . 
RA 3 PCW A 1 41 41 PCW PCW . 
SA 3 PCW A 1 42 42 PCW PCW . 
TA 3 PCW A 1 43 43 PCW PCW . 
UA 3 PCW A 1 44 44 PCW PCW . 
VA 3 PCW A 1 45 45 PCW PCW . 
WA 3 PCW A 1 46 46 PCW PCW . 
XA 3 PCW A 1 47 47 PCW PCW . 
YA 3 PCW A 1 48 48 PCW PCW . 
ZA 3 PCW A 1 49 49 PCW PCW . 
AB 3 PCW A 1 50 50 PCW PCW . 
BB 3 PCW A 1 51 51 PCW PCW . 
CB 3 PCW A 1 52 52 PCW PCW . 
DB 3 PCW A 1 53 53 PCW PCW . 
EB 3 PCW A 1 54 54 PCW PCW . 
FB 3 PCW A 1 55 55 PCW PCW . 
GB 3 PCW A 1 56 56 PCW PCW . 
HB 3 PCW A 1 57 57 PCW PCW . 
IB 3 PCW A 1 58 58 PCW PCW . 
JB 3 PCW A 1 59 59 PCW PCW . 
KB 3 PCW A 1 60 60 PCW PCW . 
LB 3 PCW A 1 61 61 PCW PCW . 
MB 3 PCW A 1 62 62 PCW PCW . 
NB 3 PCW A 1 63 63 PCW PCW . 
OB 3 PCW A 1 64 64 PCW PCW . 
PB 3 PCW A 1 65 65 PCW PCW . 
QB 3 PCW A 1 66 66 PCW PCW . 
RB 3 PCW A 1 67 67 PCW PCW . 
SB 3 PCW A 1 68 68 PCW PCW . 
TB 3 PCW A 1 69 69 PCW PCW . 
UB 3 PCW A 1 70 70 PCW PCW . 
VB 3 PCW A 1 71 71 PCW PCW . 
WB 3 PCW A 1 72 72 PCW PCW . 
XB 4 17F A 1 73 73 17F 17F . 
YB 4 17F A 1 74 74 17F 17F . 
ZB 4 17F A 1 75 75 17F 17F . 
AC 4 17F A 1 76 76 17F 17F . 
BC 4 17F A 1 77 77 17F 17F . 
CC 4 17F A 1 78 78 17F 17F . 
DC 4 17F A 1 79 79 17F 17F . 
EC 4 17F A 1 80 80 17F 17F . 
FC 5 GNP B 1 201 201 GNP GNP . 
GC 6 MG B 1 202 202 MG MG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG GNP . . . FC 5 20.445 4.829 37.537 1 10 ? PG GNP 201 B 1 
HETATM 2 O O1G GNP . . . FC 5 19.439 5.615 38.312 1 10 ? O1G GNP 201 B 1 
HETATM 3 O O2G GNP . . . FC 5 19.918 4.417 36.166 1 10 ? O2G GNP 201 B 1 
HETATM 4 O O3G GNP . . . FC 5 21.67 5.651 37.52 1 10 ? O3G GNP 201 B 1 
HETATM 5 N N3B GNP . . . FC 5 20.867 3.488 38.347 1 10 ? N3B GNP 201 B 1 
HETATM 6 P PB GNP . . . FC 5 19.889 2.422 39.049 1 10 ? PB GNP 201 B 1 
HETATM 7 O O1B GNP . . . FC 5 18.98 1.762 38.083 1 10 ? O1B GNP 201 B 1 
HETATM 8 O O2B GNP . . . FC 5 19.171 3.136 40.102 1 10 ? O2B GNP 201 B 1 
HETATM 9 O O3A GNP . . . FC 5 20.789 1.36 39.736 1 10 ? O3A GNP 201 B 1 
HETATM 10 P PA GNP . . . FC 5 21.278 -0.078 39.307 1 10 ? PA GNP 201 B 1 
HETATM 11 O O1A GNP . . . FC 5 20.129 -1.001 39.235 1 10 ? O1A GNP 201 B 1 
HETATM 12 O O2A GNP . . . FC 5 22.21 -0.044 38.174 1 10 ? O2A GNP 201 B 1 
HETATM 13 O O5' GNP . . . FC 5 22.16 -0.606 40.484 1 10 ? O5' GNP 201 B 1 
HETATM 14 C C5' GNP . . . FC 5 23.383 0.086 40.813 1 10 ? C5' GNP 201 B 1 
HETATM 15 C C4' GNP . . . FC 5 23.382 0.491 42.269 1 10 ? C4' GNP 201 B 1 
HETATM 16 O O4' GNP . . . FC 5 22.092 0.181 42.888 1 10 ? O4' GNP 201 B 1 
HETATM 17 C C3' GNP . . . FC 5 24.431 -0.225 43.115 1 10 ? C3' GNP 201 B 1 
HETATM 18 O O3' GNP . . . FC 5 25.09 0.702 43.965 1 10 ? O3' GNP 201 B 1 
HETATM 19 C C2' GNP . . . FC 5 23.629 -1.3 43.84 1 10 ? C2' GNP 201 B 1 
HETATM 20 O O2' GNP . . . FC 5 24.174 -1.772 45.049 1 10 ? O2' GNP 201 B 1 
HETATM 21 C C1' GNP . . . FC 5 22.278 -0.642 44.043 1 10 ? C1' GNP 201 B 1 
HETATM 22 N N9 GNP . . . FC 5 21.135 -1.592 44.138 1 10 ? N9 GNP 201 B 1 
HETATM 23 C C8 GNP . . . FC 5 20.361 -2.008 43.101 1 10 ? C8 GNP 201 B 1 
HETATM 24 N N7 GNP . . . FC 5 19.432 -2.843 43.452 1 10 ? N7 GNP 201 B 1 
HETATM 25 C C5 GNP . . . FC 5 19.598 -3.001 44.835 1 10 ? C5 GNP 201 B 1 
HETATM 26 C C6 GNP . . . FC 5 18.884 -3.801 45.783 1 10 ? C6 GNP 201 B 1 
HETATM 27 O O6 GNP . . . FC 5 17.935 -4.539 45.624 1 10 ? O6 GNP 201 B 1 
HETATM 28 N N1 GNP . . . FC 5 19.362 -3.677 47.062 1 10 ? N1 GNP 201 B 1 
HETATM 29 C C2 GNP . . . FC 5 20.427 -2.895 47.426 1 10 ? C2 GNP 201 B 1 
HETATM 30 N N2 GNP . . . FC 5 20.726 -2.928 48.734 1 10 ? N2 GNP 201 B 1 
HETATM 31 N N3 GNP . . . FC 5 21.105 -2.14 46.567 1 10 ? N3 GNP 201 B 1 
HETATM 32 C C4 GNP . . . FC 5 20.653 -2.252 45.274 1 10 ? C4 GNP 201 B 1 
#
_model_server_stats.io_time_ms              23 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    102 
_model_server_stats.query_time_ms           2504 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           32 
#