data_2MSD # _model_server_result.job_id HXoze-jDD1sCyeOMwPIqPw _model_server_result.datetime_utc '2024-11-04 20:19:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2msd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"RA","auth_seq_id":41}' # _entry.id 2MSD # _exptl.entry_id 2MSD _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 787.121 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE _entity.pdbx_number_of_molecules 64 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC,DC,EC,FC,GC _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 X N N ? 3 Y N N ? 3 Z N N ? 3 AA N N ? 3 BA N N ? 3 CA N N ? 3 DA N N ? 3 EA N N ? 3 FA N N ? 3 GA N N ? 3 HA N N ? 3 IA N N ? 3 RA N N ? 3 SA N N ? 3 TA N N ? 3 UA N N ? 3 VA N N ? 3 WA N N ? 3 XA N N ? 3 YA N N ? 3 ZA N N ? 3 AB N N ? 3 BB N N ? 3 CB N N ? 3 DB N N ? 3 EB N N ? 3 FB N N ? 3 GB N N ? 3 HB N N ? 3 IB N N ? 3 JB N N ? 3 KB N N ? 3 LB N N ? 3 MB N N ? 3 NB N N ? 3 OB N N ? 3 PB N N ? 3 QB N N ? 3 RB N N ? 3 SB N N ? 3 TB N N ? 3 UB N N ? 3 VB N N ? 3 WB N N # _chem_comp.formula 'C44 H85 N O8 P 1' _chem_comp.formula_weight 787.121 _chem_comp.id PCW _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms (Z,Z)-4-HYDROXY-N,N,N-TRIMETHYL-10-OXO-7-[(1-OXO-9-OCTADECENYL)OXY]-3,5,9-TRIOXA-4-PHOSPHAHEPTACOS-18-EN-1-AMINIUM-4-OXIDE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 PCW sing 417 n n C1 O3P PCW sing 418 n n C1 H11 PCW sing 419 n n C1 H12 PCW sing 420 n n C2 C3 PCW sing 421 n n C2 O2 PCW sing 422 n n C2 H2 PCW sing 423 n n C3 O3 PCW sing 424 n n C3 H31 PCW sing 425 n n C3 H32 PCW sing 426 n n C4 C5 PCW sing 427 n n C4 O4P PCW sing 428 n n C4 H41 PCW sing 429 n n C4 H42 PCW sing 430 n n C5 N PCW sing 431 n n C5 H51 PCW sing 432 n n C5 H52 PCW sing 433 n n C6 N PCW sing 434 n n C6 H61 PCW sing 435 n n C6 H62 PCW sing 436 n n C6 H63 PCW sing 437 n n C7 N PCW sing 438 n n C7 H71 PCW sing 439 n n C7 H72 PCW sing 440 n n C7 H73 PCW sing 441 n n C8 N PCW sing 442 n n C8 H81 PCW sing 443 n n C8 H82 PCW sing 444 n n C8 H83 PCW sing 445 n n C11 C12 PCW sing 446 n n C11 O3 PCW sing 447 n n C11 O11 PCW doub 448 n n C12 C13 PCW sing 449 n n C12 H121 PCW sing 450 n n C12 H122 PCW sing 451 n n C13 C14 PCW sing 452 n n C13 H131 PCW sing 453 n n C13 H132 PCW sing 454 n n C14 C15 PCW sing 455 n n C14 H141 PCW sing 456 n n C14 H142 PCW sing 457 n n C15 C16 PCW sing 458 n n C15 H151 PCW sing 459 n n C15 H152 PCW sing 460 n n C16 C17 PCW sing 461 n n C16 H161 PCW sing 462 n n C16 H162 PCW sing 463 n n C17 C18 PCW sing 464 n n C17 H171 PCW sing 465 n n C17 H172 PCW sing 466 n n C18 C19 PCW sing 467 n n C18 H181 PCW sing 468 n n C18 H182 PCW sing 469 n n C19 C20 PCW doub 470 z n C19 H19 PCW sing 471 n n C20 C21 PCW sing 472 n n C20 H20 PCW sing 473 n n C21 C22 PCW sing 474 n n C21 H211 PCW sing 475 n n C21 H212 PCW sing 476 n n C22 C23 PCW sing 477 n n C22 H221 PCW sing 478 n n C22 H222 PCW sing 479 n n C23 C24 PCW sing 480 n n C23 H231 PCW sing 481 n n C23 H232 PCW sing 482 n n C24 C25 PCW sing 483 n n C24 H241 PCW sing 484 n n C24 H242 PCW sing 485 n n C25 C26 PCW sing 486 n n C25 H251 PCW sing 487 n n C25 H252 PCW sing 488 n n C26 C27 PCW sing 489 n n C26 H261 PCW sing 490 n n C26 H262 PCW sing 491 n n C27 C28 PCW sing 492 n n C27 H271 PCW sing 493 n n C27 H272 PCW sing 494 n n C28 H281 PCW sing 495 n n C28 H282 PCW sing 496 n n C28 H283 PCW sing 497 n n C31 C32 PCW sing 498 n n C31 O2 PCW sing 499 n n C31 O31 PCW doub 500 n n C32 C33 PCW sing 501 n n C32 H321 PCW sing 502 n n C32 H322 PCW sing 503 n n C33 C34 PCW sing 504 n n C33 H331 PCW sing 505 n n C33 H332 PCW sing 506 n n C34 C35 PCW sing 507 n n C34 H341 PCW sing 508 n n C34 H342 PCW sing 509 n n C35 C36 PCW sing 510 n n C35 H351 PCW sing 511 n n C35 H352 PCW sing 512 n n C36 C37 PCW sing 513 n n C36 H361 PCW sing 514 n n C36 H362 PCW sing 515 n n C37 C38 PCW sing 516 n n C37 H371 PCW sing 517 n n C37 H372 PCW sing 518 n n C38 C39 PCW sing 519 n n C38 H381 PCW sing 520 n n C38 H382 PCW sing 521 n n C39 C40 PCW doub 522 z n C39 H39 PCW sing 523 n n C40 C41 PCW sing 524 n n C40 H40 PCW sing 525 n n C41 C42 PCW sing 526 n n C41 H411 PCW sing 527 n n C41 H412 PCW sing 528 n n C42 C43 PCW sing 529 n n C42 H421 PCW sing 530 n n C42 H422 PCW sing 531 n n C43 C44 PCW sing 532 n n C43 H431 PCW sing 533 n n C43 H432 PCW sing 534 n n C44 C45 PCW sing 535 n n C44 H441 PCW sing 536 n n C44 H442 PCW sing 537 n n C45 C46 PCW sing 538 n n C45 H451 PCW sing 539 n n C45 H452 PCW sing 540 n n C46 C47 PCW sing 541 n n C46 H461 PCW sing 542 n n C46 H462 PCW sing 543 n n C47 C48 PCW sing 544 n n C47 H471 PCW sing 545 n n C47 H472 PCW sing 546 n n C48 H481 PCW sing 547 n n C48 H482 PCW sing 548 n n C48 H483 PCW sing 549 n n O1P P PCW sing 550 n n O1P H1P PCW sing 551 n n O2P P PCW doub 552 n n O3P P PCW sing 553 n n O4P P PCW sing 554 n n # _atom_sites.entry_id 2MSD _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 PCW A 1 1 1 PCW PCW . E 3 PCW A 1 2 2 PCW PCW . F 3 PCW A 1 3 3 PCW PCW . G 3 PCW A 1 4 4 PCW PCW . H 3 PCW A 1 5 5 PCW PCW . I 3 PCW A 1 6 6 PCW PCW . J 3 PCW A 1 7 7 PCW PCW . K 3 PCW A 1 8 8 PCW PCW . L 3 PCW A 1 9 9 PCW PCW . M 3 PCW A 1 10 10 PCW PCW . N 3 PCW A 1 11 11 PCW PCW . O 3 PCW A 1 12 12 PCW PCW . P 3 PCW A 1 13 13 PCW PCW . Q 3 PCW A 1 14 14 PCW PCW . R 3 PCW A 1 15 15 PCW PCW . S 3 PCW A 1 16 16 PCW PCW . T 3 PCW A 1 17 17 PCW PCW . U 3 PCW A 1 18 18 PCW PCW . V 3 PCW A 1 19 19 PCW PCW . W 3 PCW A 1 20 20 PCW PCW . X 3 PCW A 1 21 21 PCW PCW . Y 3 PCW A 1 22 22 PCW PCW . Z 3 PCW A 1 23 23 PCW PCW . AA 3 PCW A 1 24 24 PCW PCW . BA 3 PCW A 1 25 25 PCW PCW . CA 3 PCW A 1 26 26 PCW PCW . DA 3 PCW A 1 27 27 PCW PCW . EA 3 PCW A 1 28 28 PCW PCW . FA 3 PCW A 1 29 29 PCW PCW . GA 3 PCW A 1 30 30 PCW PCW . HA 3 PCW A 1 31 31 PCW PCW . IA 3 PCW A 1 32 32 PCW PCW . JA 4 17F A 1 33 33 17F 17F . KA 4 17F A 1 34 34 17F 17F . LA 4 17F A 1 35 35 17F 17F . MA 4 17F A 1 36 36 17F 17F . NA 4 17F A 1 37 37 17F 17F . OA 4 17F A 1 38 38 17F 17F . PA 4 17F A 1 39 39 17F 17F . QA 4 17F A 1 40 40 17F 17F . RA 3 PCW A 1 41 41 PCW PCW . SA 3 PCW A 1 42 42 PCW PCW . TA 3 PCW A 1 43 43 PCW PCW . UA 3 PCW A 1 44 44 PCW PCW . VA 3 PCW A 1 45 45 PCW PCW . WA 3 PCW A 1 46 46 PCW PCW . XA 3 PCW A 1 47 47 PCW PCW . YA 3 PCW A 1 48 48 PCW PCW . ZA 3 PCW A 1 49 49 PCW PCW . AB 3 PCW A 1 50 50 PCW PCW . BB 3 PCW A 1 51 51 PCW PCW . CB 3 PCW A 1 52 52 PCW PCW . DB 3 PCW A 1 53 53 PCW PCW . EB 3 PCW A 1 54 54 PCW PCW . FB 3 PCW A 1 55 55 PCW PCW . GB 3 PCW A 1 56 56 PCW PCW . HB 3 PCW A 1 57 57 PCW PCW . IB 3 PCW A 1 58 58 PCW PCW . JB 3 PCW A 1 59 59 PCW PCW . KB 3 PCW A 1 60 60 PCW PCW . LB 3 PCW A 1 61 61 PCW PCW . MB 3 PCW A 1 62 62 PCW PCW . NB 3 PCW A 1 63 63 PCW PCW . OB 3 PCW A 1 64 64 PCW PCW . PB 3 PCW A 1 65 65 PCW PCW . QB 3 PCW A 1 66 66 PCW PCW . RB 3 PCW A 1 67 67 PCW PCW . SB 3 PCW A 1 68 68 PCW PCW . TB 3 PCW A 1 69 69 PCW PCW . UB 3 PCW A 1 70 70 PCW PCW . VB 3 PCW A 1 71 71 PCW PCW . WB 3 PCW A 1 72 72 PCW PCW . XB 4 17F A 1 73 73 17F 17F . YB 4 17F A 1 74 74 17F 17F . ZB 4 17F A 1 75 75 17F 17F . AC 4 17F A 1 76 76 17F 17F . BC 4 17F A 1 77 77 17F 17F . CC 4 17F A 1 78 78 17F 17F . DC 4 17F A 1 79 79 17F 17F . EC 4 17F A 1 80 80 17F 17F . FC 5 GNP B 1 201 201 GNP GNP . GC 6 MG B 1 202 202 MG MG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PCW . . . RA 3 12.476 -20.535 -16.221 1 10 ? C1 PCW 41 A 1 HETATM 2 C C2 PCW . . . RA 3 13.266 -21.264 -15.065 1 10 ? C2 PCW 41 A 1 HETATM 3 C C3 PCW . . . RA 3 14.012 -20.212 -14.168 1 10 ? C3 PCW 41 A 1 HETATM 4 C C4 PCW . . . RA 3 9.211 -23.646 -18.152 1 10 ? C4 PCW 41 A 1 HETATM 5 C C5 PCW . . . RA 3 9.403 -25.024 -18.784 1 10 ? C5 PCW 41 A 1 HETATM 6 C C6 PCW . . . RA 3 7.724 -24.559 -20.65 1 10 ? C6 PCW 41 A 1 HETATM 7 C C7 PCW . . . RA 3 9.13 -26.564 -20.713 1 10 ? C7 PCW 41 A 1 HETATM 8 C C8 PCW . . . RA 3 7.824 -26.134 -19.477 1 10 ? C8 PCW 41 A 1 HETATM 9 C C11 PCW . . . RA 3 15.915 -21.488 -13.42 1 10 ? C11 PCW 41 A 1 HETATM 10 C C12 PCW . . . RA 3 16.485 -22.135 -12.183 1 10 ? C12 PCW 41 A 1 HETATM 11 C C13 PCW . . . RA 3 17.603 -21.192 -11.6 1 10 ? C13 PCW 41 A 1 HETATM 12 C C14 PCW . . . RA 3 18.288 -21.708 -10.33 1 10 ? C14 PCW 41 A 1 HETATM 13 C C15 PCW . . . RA 3 19.227 -20.698 -9.602 1 10 ? C15 PCW 41 A 1 HETATM 14 C C16 PCW . . . RA 3 20.149 -21.441 -8.57 1 10 ? C16 PCW 41 A 1 HETATM 15 C C17 PCW . . . RA 3 20.162 -20.903 -7.099 1 10 ? C17 PCW 41 A 1 HETATM 16 C C18 PCW . . . RA 3 21.425 -20.114 -6.755 1 10 ? C18 PCW 41 A 1 HETATM 17 C C19 PCW . . . RA 3 21.638 -19.961 -5.231 1 10 ? C19 PCW 41 A 1 HETATM 18 C C20 PCW . . . RA 3 22.896 -19.988 -4.647 1 10 ? C20 PCW 41 A 1 HETATM 19 C C21 PCW . . . RA 3 24.261 -20.15 -5.207 1 10 ? C21 PCW 41 A 1 HETATM 20 C C22 PCW . . . RA 3 25.205 -20.433 -4.002 1 10 ? C22 PCW 41 A 1 HETATM 21 C C23 PCW . . . RA 3 25.658 -21.901 -3.777 1 10 ? C23 PCW 41 A 1 HETATM 22 C C24 PCW . . . RA 3 26.596 -22.155 -2.637 1 10 ? C24 PCW 41 A 1 HETATM 23 C C25 PCW . . . RA 3 26.149 -21.932 -1.161 1 10 ? C25 PCW 41 A 1 HETATM 24 C C26 PCW . . . RA 3 26.101 -23.162 -0.277 1 10 ? C26 PCW 41 A 1 HETATM 25 C C27 PCW . . . RA 3 24.968 -23.259 0.766 1 10 ? C27 PCW 41 A 1 HETATM 26 C C28 PCW . . . RA 3 25.317 -24.288 1.812 1 10 ? C28 PCW 41 A 1 HETATM 27 C C31 PCW . . . RA 3 12.338 -23.323 -14.365 1 10 ? C31 PCW 41 A 1 HETATM 28 C C32 PCW . . . RA 3 11.316 -23.949 -13.401 1 10 ? C32 PCW 41 A 1 HETATM 29 C C33 PCW . . . RA 3 11.919 -25 -12.351 1 10 ? C33 PCW 41 A 1 HETATM 30 C C34 PCW . . . RA 3 11.267 -24.918 -10.971 1 10 ? C34 PCW 41 A 1 HETATM 31 C C35 PCW . . . RA 3 12.109 -23.845 -10.166 1 10 ? C35 PCW 41 A 1 HETATM 32 C C36 PCW . . . RA 3 13.007 -24.49 -9.087 1 10 ? C36 PCW 41 A 1 HETATM 33 C C37 PCW . . . RA 3 13.867 -23.493 -8.251 1 10 ? C37 PCW 41 A 1 HETATM 34 C C38 PCW . . . RA 3 15.316 -23.841 -8.296 1 10 ? C38 PCW 41 A 1 HETATM 35 C C39 PCW . . . RA 3 16.166 -22.891 -7.493 1 10 ? C39 PCW 41 A 1 HETATM 36 C C40 PCW . . . RA 3 16.873 -23.176 -6.402 1 10 ? C40 PCW 41 A 1 HETATM 37 C C41 PCW . . . RA 3 16.938 -24.558 -5.771 1 10 ? C41 PCW 41 A 1 HETATM 38 C C42 PCW . . . RA 3 16.594 -24.412 -4.22 1 10 ? C42 PCW 41 A 1 HETATM 39 C C43 PCW . . . RA 3 15.604 -25.378 -3.598 1 10 ? C43 PCW 41 A 1 HETATM 40 C C44 PCW . . . RA 3 15.478 -25.004 -2.127 1 10 ? C44 PCW 41 A 1 HETATM 41 C C45 PCW . . . RA 3 14.411 -25.747 -1.362 1 10 ? C45 PCW 41 A 1 HETATM 42 C C46 PCW . . . RA 3 13.291 -24.869 -0.877 1 10 ? C46 PCW 41 A 1 HETATM 43 C C47 PCW . . . RA 3 13.083 -24.809 0.621 1 10 ? C47 PCW 41 A 1 HETATM 44 C C48 PCW . . . RA 3 11.911 -23.881 0.984 1 10 ? C48 PCW 41 A 1 HETATM 45 N N PCW . . . RA 3 8.884 -25.281 -20.094 1 10 ? N PCW 41 A 1 HETATM 46 O O2 PCW . . . RA 3 12.317 -22.005 -14.188 1 10 ? O2 PCW 41 A 1 HETATM 47 O O3 PCW . . . RA 3 14.726 -20.89 -13.116 1 10 ? O3 PCW 41 A 1 HETATM 48 O O11 PCW . . . RA 3 16.426 -21.5 -14.504 1 10 ? O11 PCW 41 A 1 HETATM 49 O O31 PCW . . . RA 3 13.067 -23.958 -15.181 1 10 ? O31 PCW 41 A 1 HETATM 50 O O1P PCW . . . RA 3 10.483 -21.172 -18.977 1 10 ? O1P PCW 41 A 1 HETATM 51 O O2P PCW . . . RA 3 12.567 -22.404 -18.391 1 10 ? O2P PCW 41 A 1 HETATM 52 O O3P PCW . . . RA 3 11.227 -21.173 -16.563 1 10 ? O3P PCW 41 A 1 HETATM 53 O O4P PCW . . . RA 3 10.486 -23.263 -17.575 1 10 ? O4P PCW 41 A 1 HETATM 54 P P PCW . . . RA 3 11.216 -21.988 -17.95 1 10 ? P PCW 41 A 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 109 _model_server_stats.query_time_ms 3128 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 54 #