data_2MSE # _model_server_result.job_id UB0cUMS8FNgIJaMc1Z5btQ _model_server_result.datetime_utc '2024-12-26 20:26:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2mse # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"GC","auth_seq_id":201}' # _entry.id 2MSE # _exptl.entry_id 2MSE _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 522.196 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC,DC,EC,FC,GC,HC _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id GC _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id C _struct_conn.ptnr1_label_atom_id OD1 _struct_conn.ptnr1_label_comp_id ASP _struct_conn.ptnr1_label_seq_id 40 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id ASP _struct_conn.ptnr1_auth_seq_id 38 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id HC _struct_conn.ptnr2_label_atom_id MG _struct_conn.ptnr2_label_comp_id MG _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id MG _struct_conn.ptnr2_auth_seq_id 202 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.751 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C10 H17 N6 O13 P3' _chem_comp.formula_weight 522.196 _chem_comp.id GNP _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G GNP doub 260 n n PG O2G GNP sing 261 n n PG O3G GNP sing 262 n n PG N3B GNP sing 263 n n O2G HOG2 GNP sing 264 n n O3G HOG3 GNP sing 265 n n N3B PB GNP sing 266 n n N3B HNB3 GNP sing 267 n n PB O1B GNP doub 268 n n PB O2B GNP sing 269 n n PB O3A GNP sing 270 n n O2B HOB2 GNP sing 271 n n O3A PA GNP sing 272 n n PA O1A GNP doub 273 n n PA O2A GNP sing 274 n n PA O5' GNP sing 275 n n O2A HOA2 GNP sing 276 n n O5' C5' GNP sing 277 n n C5' C4' GNP sing 278 n n C5' "H5'2" GNP sing 279 n n C5' "H5'1" GNP sing 280 n n C4' O4' GNP sing 281 n n C4' C3' GNP sing 282 n n C4' H4' GNP sing 283 n n O4' C1' GNP sing 284 n n C3' O3' GNP sing 285 n n C3' C2' GNP sing 286 n n C3' H3' GNP sing 287 n n O3' HO3' GNP sing 288 n n C2' O2' GNP sing 289 n n C2' C1' GNP sing 290 n n C2' H2' GNP sing 291 n n O2' HO2' GNP sing 292 n n C1' N9 GNP sing 293 n n C1' H1' GNP sing 294 n n N9 C8 GNP sing 295 n y N9 C4 GNP sing 296 n y C8 N7 GNP doub 297 n y C8 H8 GNP sing 298 n n N7 C5 GNP sing 299 n y C5 C6 GNP sing 300 n y C5 C4 GNP doub 301 n y C6 O6 GNP doub 302 n n C6 N1 GNP sing 303 n y N1 C2 GNP sing 304 n y N1 HN1 GNP sing 305 n n C2 N2 GNP sing 306 n n C2 N3 GNP doub 307 n y N2 HN21 GNP sing 308 n n N2 HN22 GNP sing 309 n n N3 C4 GNP sing 310 n y # _atom_sites.entry_id 2MSE _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 PCW A 1 1 1 PCW PCW . F 4 PCW A 1 2 2 PCW PCW . G 4 PCW A 1 3 3 PCW PCW . H 4 PCW A 1 4 4 PCW PCW . I 4 PCW A 1 5 5 PCW PCW . J 4 PCW A 1 6 6 PCW PCW . K 4 PCW A 1 7 7 PCW PCW . L 4 PCW A 1 8 8 PCW PCW . M 4 PCW A 1 9 9 PCW PCW . N 4 PCW A 1 10 10 PCW PCW . O 4 PCW A 1 11 11 PCW PCW . P 4 PCW A 1 12 12 PCW PCW . Q 4 PCW A 1 13 13 PCW PCW . R 4 PCW A 1 14 14 PCW PCW . S 4 PCW A 1 15 15 PCW PCW . T 4 PCW A 1 16 16 PCW PCW . U 4 PCW A 1 17 17 PCW PCW . V 4 PCW A 1 18 18 PCW PCW . W 4 PCW A 1 19 19 PCW PCW . X 4 PCW A 1 20 20 PCW PCW . Y 4 PCW A 1 21 21 PCW PCW . Z 4 PCW A 1 22 22 PCW PCW . AA 4 PCW A 1 23 23 PCW PCW . BA 4 PCW A 1 24 24 PCW PCW . CA 4 PCW A 1 25 25 PCW PCW . DA 4 PCW A 1 26 26 PCW PCW . EA 4 PCW A 1 27 27 PCW PCW . FA 4 PCW A 1 28 28 PCW PCW . GA 4 PCW A 1 29 29 PCW PCW . HA 4 PCW A 1 30 30 PCW PCW . IA 4 PCW A 1 31 31 PCW PCW . JA 4 PCW A 1 32 32 PCW PCW . KA 5 17F A 1 33 33 17F 17F . LA 5 17F A 1 34 34 17F 17F . MA 5 17F A 1 35 35 17F 17F . NA 5 17F A 1 36 36 17F 17F . OA 5 17F A 1 37 37 17F 17F . PA 5 17F A 1 38 38 17F 17F . QA 5 17F A 1 39 39 17F 17F . RA 5 17F A 1 40 40 17F 17F . SA 4 PCW A 1 41 41 PCW PCW . TA 4 PCW A 1 42 42 PCW PCW . UA 4 PCW A 1 43 43 PCW PCW . VA 4 PCW A 1 44 44 PCW PCW . WA 4 PCW A 1 45 45 PCW PCW . XA 4 PCW A 1 46 46 PCW PCW . YA 4 PCW A 1 47 47 PCW PCW . ZA 4 PCW A 1 48 48 PCW PCW . AB 4 PCW A 1 49 49 PCW PCW . BB 4 PCW A 1 50 50 PCW PCW . CB 4 PCW A 1 51 51 PCW PCW . DB 4 PCW A 1 52 52 PCW PCW . EB 4 PCW A 1 53 53 PCW PCW . FB 4 PCW A 1 54 54 PCW PCW . GB 4 PCW A 1 55 55 PCW PCW . HB 4 PCW A 1 56 56 PCW PCW . IB 4 PCW A 1 57 57 PCW PCW . JB 4 PCW A 1 58 58 PCW PCW . KB 4 PCW A 1 59 59 PCW PCW . LB 4 PCW A 1 60 60 PCW PCW . MB 4 PCW A 1 61 61 PCW PCW . NB 4 PCW A 1 62 62 PCW PCW . OB 4 PCW A 1 63 63 PCW PCW . PB 4 PCW A 1 64 64 PCW PCW . QB 4 PCW A 1 65 65 PCW PCW . RB 4 PCW A 1 66 66 PCW PCW . SB 4 PCW A 1 67 67 PCW PCW . TB 4 PCW A 1 68 68 PCW PCW . UB 4 PCW A 1 69 69 PCW PCW . VB 4 PCW A 1 70 70 PCW PCW . WB 4 PCW A 1 71 71 PCW PCW . XB 4 PCW A 1 72 72 PCW PCW . YB 5 17F A 1 73 73 17F 17F . ZB 5 17F A 1 74 74 17F 17F . AC 5 17F A 1 75 75 17F 17F . BC 5 17F A 1 76 76 17F 17F . CC 5 17F A 1 77 77 17F 17F . DC 5 17F A 1 78 78 17F 17F . EC 5 17F A 1 79 79 17F 17F . FC 5 17F A 1 80 80 17F 17F . GC 6 GNP B 1 201 201 GNP GNP . HC 7 MG B 1 202 202 MG MG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG GNP . . . GC 6 11.155 -11.439 -46.026 1 10 ? PG GNP 201 B 1 HETATM 2 O O1G GNP . . . GC 6 11.935 -10.52 -46.905 1 10 ? O1G GNP 201 B 1 HETATM 3 O O2G GNP . . . GC 6 11.527 -11.284 -44.553 1 10 ? O2G GNP 201 B 1 HETATM 4 O O3G GNP . . . GC 6 9.737 -11.187 -46.344 1 10 ? O3G GNP 201 B 1 HETATM 5 N N3B GNP . . . GC 6 11.412 -12.989 -46.461 1 10 ? N3B GNP 201 B 1 HETATM 6 P PB GNP . . . GC 6 12.825 -13.759 -46.559 1 10 ? PB GNP 201 B 1 HETATM 7 O O1B GNP . . . GC 6 13.35 -14.167 -45.237 1 10 ? O1B GNP 201 B 1 HETATM 8 O O2B GNP . . . GC 6 13.736 -12.873 -47.278 1 10 ? O2B GNP 201 B 1 HETATM 9 O O3A GNP . . . GC 6 12.609 -15.019 -47.444 1 10 ? O3A GNP 201 B 1 HETATM 10 P PA GNP . . . GC 6 11.992 -16.447 -47.179 1 10 ? PA GNP 201 B 1 HETATM 11 O O1A GNP . . . GC 6 12.832 -17.204 -46.228 1 10 ? O1A GNP 201 B 1 HETATM 12 O O2A GNP . . . GC 6 10.547 -16.401 -46.946 1 10 ? O2A GNP 201 B 1 HETATM 13 O O5' GNP . . . GC 6 12.109 -17.217 -48.534 1 10 ? O5' GNP 201 B 1 HETATM 14 C C5' GNP . . . GC 6 11.393 -16.724 -49.692 1 10 ? C5' GNP 201 B 1 HETATM 15 C C4' GNP . . . GC 6 11.61 -17.651 -50.858 1 10 ? C4' GNP 201 B 1 HETATM 16 O O4' GNP . . . GC 6 13.045 -17.865 -51.057 1 10 ? O4' GNP 201 B 1 HETATM 17 C C3' GNP . . . GC 6 10.999 -19.045 -50.693 1 10 ? C3' GNP 201 B 1 HETATM 18 O O3' GNP . . . GC 6 10.318 -19.422 -51.88 1 10 ? O3' GNP 201 B 1 HETATM 19 C C2' GNP . . . GC 6 12.191 -19.93 -50.341 1 10 ? C2' GNP 201 B 1 HETATM 20 O O2' GNP . . . GC 6 12.081 -21.289 -50.693 1 10 ? O2' GNP 201 B 1 HETATM 21 C C1' GNP . . . GC 6 13.359 -19.263 -51.046 1 10 ? C1' GNP 201 B 1 HETATM 22 N N9 GNP . . . GC 6 14.664 -19.446 -50.369 1 10 ? N9 GNP 201 B 1 HETATM 23 C C8 GNP . . . GC 6 14.965 -19.038 -49.107 1 10 ? C8 GNP 201 B 1 HETATM 24 N N7 GNP . . . GC 6 16.178 -19.323 -48.742 1 10 ? N7 GNP 201 B 1 HETATM 25 C C5 GNP . . . GC 6 16.734 -19.977 -49.846 1 10 ? C5 GNP 201 B 1 HETATM 26 C C6 GNP . . . GC 6 18.044 -20.532 -50.051 1 10 ? C6 GNP 201 B 1 HETATM 27 O O6 GNP . . . GC 6 19.002 -20.571 -49.307 1 10 ? O6 GNP 201 B 1 HETATM 28 N N1 GNP . . . GC 6 18.193 -21.099 -51.294 1 10 ? N1 GNP 201 B 1 HETATM 29 C C2 GNP . . . GC 6 17.222 -21.148 -52.259 1 10 ? C2 GNP 201 B 1 HETATM 30 N N2 GNP . . . GC 6 17.589 -21.751 -53.402 1 10 ? N2 GNP 201 B 1 HETATM 31 N N3 GNP . . . GC 6 16.002 -20.64 -52.094 1 10 ? N3 GNP 201 B 1 HETATM 32 C C4 GNP . . . GC 6 15.822 -20.071 -50.859 1 10 ? C4 GNP 201 B 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 434 _model_server_stats.query_time_ms 2884 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 32 #