data_2MTA # _model_server_result.job_id yBDthZ5JdzKmPtP7B3vIMw _model_server_result.datetime_utc '2024-11-05 00:35:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2mta # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":200}' # _entry.id 2MTA # _exptl.entry_id 2MTA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 618.503 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2MTA _cell.length_a 148.81 _cell.length_b 68.85 _cell.length_c 187.18 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2MTA _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 168 H CYS 168 1_555 A SG CYS 183 H CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? disulf ? disulf2 B SG CYS 17 L CYS 23 1_555 B SG CYS 82 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf3 B SG CYS 23 L CYS 29 1_555 B SG CYS 55 L CYS 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf4 B SG CYS 30 L CYS 36 1_555 B SG CYS 115 L CYS 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? disulf ? disulf5 B SG CYS 32 L CYS 38 1_555 B SG CYS 80 L CYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? disulf ? disulf6 B SG CYS 40 L CYS 46 1_555 B SG CYS 71 L CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? disulf ? disulf7 B SG CYS 72 L CYS 78 1_555 B SG CYS 103 L CYS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.98 ? covale ? covale1 B C SER 50 L SER 56 1_555 B N TRQ 51 L TRQ 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale2 B C TRQ 51 L TRQ 57 1_555 B N VAL 52 L VAL 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 B CE3 TRQ 51 L TRQ 57 1_555 B CD1 TRP 102 L TRP 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.419 ? covale ? covale4 D SG CYS 57 C CYS 57 1_555 G CAB HEC . C HEC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.817 ? covale ? covale5 D SG CYS 60 C CYS 60 1_555 G CAC HEC . C HEC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.783 ? metalc ? metalc1 F CU CU . A CU 0 1_555 C ND1 HIS 53 A HIS 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc2 F CU CU . A CU 0 1_555 C SG CYS 92 A CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc3 F CU CU . A CU 0 1_555 C ND1 HIS 95 A HIS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc4 D NE2 HIS 61 C HIS 61 1_555 G FE HEC . C HEC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc5 D SD MET 101 C MET 101 1_555 G FE HEC . C HEC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2MTA _atom_sites.fract_transf_matrix[1][1] 0.00672 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014524 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005342 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 PO4 H 1 0 0 PO4 PO4 . F 6 CU A 1 0 0 CU CU . G 7 HEC C 1 200 200 HEC HEM . H 8 HOH H 1 374 2 HOH HOH . H 8 HOH H 2 375 3 HOH HOH . H 8 HOH H 3 376 5 HOH HOH . H 8 HOH H 4 377 6 HOH HOH . H 8 HOH H 5 378 7 HOH HOH . H 8 HOH H 6 379 10 HOH HOH . H 8 HOH H 7 380 11 HOH HOH . H 8 HOH H 8 381 13 HOH HOH . H 8 HOH H 9 382 14 HOH HOH . H 8 HOH H 10 383 15 HOH HOH . H 8 HOH H 11 384 16 HOH HOH . H 8 HOH H 12 385 17 HOH HOH . H 8 HOH H 13 386 18 HOH HOH . H 8 HOH H 14 387 19 HOH HOH . H 8 HOH H 15 388 20 HOH HOH . H 8 HOH H 16 389 21 HOH HOH . H 8 HOH H 17 390 24 HOH HOH . H 8 HOH H 18 391 25 HOH HOH . H 8 HOH H 19 392 28 HOH HOH . H 8 HOH H 20 393 29 HOH HOH . H 8 HOH H 21 394 30 HOH HOH . H 8 HOH H 22 395 31 HOH HOH . H 8 HOH H 23 396 32 HOH HOH . H 8 HOH H 24 397 35 HOH HOH . H 8 HOH H 25 398 36 HOH HOH . H 8 HOH H 26 399 39 HOH HOH . H 8 HOH H 27 400 41 HOH HOH . H 8 HOH H 28 401 47 HOH HOH . H 8 HOH H 29 402 49 HOH HOH . H 8 HOH H 30 403 50 HOH HOH . H 8 HOH H 31 404 51 HOH HOH . H 8 HOH H 32 405 53 HOH HOH . H 8 HOH H 33 406 55 HOH HOH . H 8 HOH H 34 407 58 HOH HOH . H 8 HOH H 35 408 59 HOH HOH . H 8 HOH H 36 409 63 HOH HOH . H 8 HOH H 37 410 64 HOH HOH . H 8 HOH H 38 411 66 HOH HOH . H 8 HOH H 39 412 67 HOH HOH . H 8 HOH H 40 413 68 HOH HOH . H 8 HOH H 41 414 70 HOH HOH . H 8 HOH H 42 415 73 HOH HOH . H 8 HOH H 43 416 75 HOH HOH . H 8 HOH H 44 417 76 HOH HOH . H 8 HOH H 45 418 77 HOH HOH . H 8 HOH H 46 419 78 HOH HOH . H 8 HOH H 47 420 80 HOH HOH . H 8 HOH H 48 421 81 HOH HOH . H 8 HOH H 49 422 86 HOH HOH . H 8 HOH H 50 423 88 HOH HOH . H 8 HOH H 51 424 89 HOH HOH . H 8 HOH H 52 425 91 HOH HOH . H 8 HOH H 53 426 92 HOH HOH . H 8 HOH H 54 427 93 HOH HOH . H 8 HOH H 55 428 94 HOH HOH . H 8 HOH H 56 429 95 HOH HOH . H 8 HOH H 57 430 98 HOH HOH . H 8 HOH H 58 431 100 HOH HOH . H 8 HOH H 59 432 101 HOH HOH . H 8 HOH H 60 433 106 HOH HOH . H 8 HOH H 61 434 108 HOH HOH . H 8 HOH H 62 435 109 HOH HOH . H 8 HOH H 63 436 111 HOH HOH . H 8 HOH H 64 437 112 HOH HOH . H 8 HOH H 65 438 114 HOH HOH . H 8 HOH H 66 439 117 HOH HOH . H 8 HOH H 67 440 118 HOH HOH . H 8 HOH H 68 441 120 HOH HOH . H 8 HOH H 69 442 121 HOH HOH . H 8 HOH H 70 443 122 HOH HOH . H 8 HOH H 71 444 123 HOH HOH . H 8 HOH H 72 445 126 HOH HOH . H 8 HOH H 73 446 127 HOH HOH . I 8 HOH L 1 132 4 HOH HOH . I 8 HOH L 2 133 12 HOH HOH . I 8 HOH L 3 134 26 HOH HOH . I 8 HOH L 4 135 27 HOH HOH . I 8 HOH L 5 136 33 HOH HOH . I 8 HOH L 6 137 37 HOH HOH . I 8 HOH L 7 138 43 HOH HOH . I 8 HOH L 8 139 44 HOH HOH . I 8 HOH L 9 140 46 HOH HOH . I 8 HOH L 10 141 48 HOH HOH . I 8 HOH L 11 142 54 HOH HOH . I 8 HOH L 12 143 82 HOH HOH . I 8 HOH L 13 144 90 HOH HOH . I 8 HOH L 14 145 105 HOH HOH . I 8 HOH L 15 146 110 HOH HOH . I 8 HOH L 16 147 115 HOH HOH . I 8 HOH L 17 148 116 HOH HOH . J 8 HOH A 1 106 9 HOH HOH . J 8 HOH A 2 107 23 HOH HOH . J 8 HOH A 3 108 34 HOH HOH . J 8 HOH A 4 109 40 HOH HOH . J 8 HOH A 5 110 45 HOH HOH . J 8 HOH A 6 111 52 HOH HOH . J 8 HOH A 7 112 56 HOH HOH . J 8 HOH A 8 113 60 HOH HOH . J 8 HOH A 9 114 69 HOH HOH . J 8 HOH A 10 115 72 HOH HOH . J 8 HOH A 11 116 83 HOH HOH . J 8 HOH A 12 117 85 HOH HOH . J 8 HOH A 13 118 87 HOH HOH . J 8 HOH A 14 119 103 HOH HOH . K 8 HOH C 1 201 1 HOH HOH . K 8 HOH C 2 202 8 HOH HOH . K 8 HOH C 3 203 22 HOH HOH . K 8 HOH C 4 204 38 HOH HOH . K 8 HOH C 5 205 42 HOH HOH . K 8 HOH C 6 206 57 HOH HOH . K 8 HOH C 7 207 61 HOH HOH . K 8 HOH C 8 208 62 HOH HOH . K 8 HOH C 9 209 65 HOH HOH . K 8 HOH C 10 210 71 HOH HOH . K 8 HOH C 11 211 74 HOH HOH . K 8 HOH C 12 212 79 HOH HOH . K 8 HOH C 13 213 84 HOH HOH . K 8 HOH C 14 214 96 HOH HOH . K 8 HOH C 15 215 97 HOH HOH . K 8 HOH C 16 216 99 HOH HOH . K 8 HOH C 17 217 102 HOH HOH . K 8 HOH C 18 218 104 HOH HOH . K 8 HOH C 19 219 107 HOH HOH . K 8 HOH C 20 220 113 HOH HOH . K 8 HOH C 21 221 119 HOH HOH . K 8 HOH C 22 222 124 HOH HOH . K 8 HOH C 23 223 125 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . G 7 6.235 39.048 40.409 1 7.93 ? FE HEC 200 C 1 HETATM 2 C CHA HEC . . . G 7 7.505 39.981 37.452 1 13.11 ? CHA HEC 200 C 1 HETATM 3 C CHB HEC . . . G 7 9.248 39.333 41.89 1 13.77 ? CHB HEC 200 C 1 HETATM 4 C CHC HEC . . . G 7 4.78 38.743 43.452 1 10.61 ? CHC HEC 200 C 1 HETATM 5 C CHD HEC . . . G 7 3.177 38.429 38.902 1 18.15 ? CHD HEC 200 C 1 HETATM 6 N NA HEC . . . G 7 7.965 39.618 39.838 1 8.04 ? NA HEC 200 C 1 HETATM 7 C C1A HEC . . . G 7 8.343 40 38.575 1 12.09 ? C1A HEC 200 C 1 HETATM 8 C C2A HEC . . . G 7 9.753 40.335 38.533 1 10.79 ? C2A HEC 200 C 1 HETATM 9 C C3A HEC . . . G 7 10.25 40.127 39.782 1 10.63 ? C3A HEC 200 C 1 HETATM 10 C C4A HEC . . . G 7 9.128 39.687 40.567 1 15.99 ? C4A HEC 200 C 1 HETATM 11 C CMA HEC . . . G 7 11.649 40.33 40.319 1 6.67 ? CMA HEC 200 C 1 HETATM 12 C CAA HEC . . . G 7 10.512 40.779 37.272 1 12.45 ? CAA HEC 200 C 1 HETATM 13 C CBA HEC . . . G 7 11.05 39.537 36.574 1 6.67 ? CBA HEC 200 C 1 HETATM 14 C CGA HEC . . . G 7 12.256 39.717 35.696 1 11.22 ? CGA HEC 200 C 1 HETATM 15 O O1A HEC . . . G 7 12.887 40.769 35.678 1 8.09 ? O1A HEC 200 C 1 HETATM 16 O O2A HEC . . . G 7 12.598 38.752 35.013 1 23.71 ? O2A HEC 200 C 1 HETATM 17 N NB HEC . . . G 7 6.912 38.888 42.264 1 15.68 ? NB HEC 200 C 1 HETATM 18 C C1B HEC . . . G 7 8.204 38.909 42.683 1 13.92 ? C1B HEC 200 C 1 HETATM 19 C C2B HEC . . . G 7 8.314 38.715 44.096 1 9.3 ? C2B HEC 200 C 1 HETATM 20 C C3B HEC . . . G 7 7.053 38.658 44.568 1 7.23 ? C3B HEC 200 C 1 HETATM 21 C C4B HEC . . . G 7 6.181 38.776 43.428 1 9.35 ? C4B HEC 200 C 1 HETATM 22 C CMB HEC . . . G 7 9.638 38.53 44.817 1 6.54 ? CMB HEC 200 C 1 HETATM 23 C CAB HEC . . . G 7 6.617 38.457 46.03 1 8.27 ? CAB HEC 200 C 1 HETATM 24 C CBB HEC . . . G 7 6.906 39.681 46.929 1 2 ? CBB HEC 200 C 1 HETATM 25 N NC HEC . . . G 7 4.382 38.759 41.032 1 9.36 ? NC HEC 200 C 1 HETATM 26 C C1C HEC . . . G 7 3.943 38.724 42.335 1 12.05 ? C1C HEC 200 C 1 HETATM 27 C C2C HEC . . . G 7 2.555 38.334 42.391 1 15.83 ? C2C HEC 200 C 1 HETATM 28 C C3C HEC . . . G 7 2.119 38.048 41.132 1 10.18 ? C3C HEC 200 C 1 HETATM 29 C C4C HEC . . . G 7 3.246 38.395 40.291 1 14.72 ? C4C HEC 200 C 1 HETATM 30 C CMC HEC . . . G 7 1.751 38.264 43.685 1 14.11 ? CMC HEC 200 C 1 HETATM 31 C CAC HEC . . . G 7 0.819 37.37 40.706 1 4.2 ? CAC HEC 200 C 1 HETATM 32 C CBC HEC . . . G 7 -0.486 38.125 40.714 1 2 ? CBC HEC 200 C 1 HETATM 33 N ND HEC . . . G 7 5.506 39.155 38.568 1 18.47 ? ND HEC 200 C 1 HETATM 34 C C1D HEC . . . G 7 4.219 38.855 38.089 1 16.86 ? C1D HEC 200 C 1 HETATM 35 C C2D HEC . . . G 7 4.091 39.16 36.688 1 14.88 ? C2D HEC 200 C 1 HETATM 36 C C3D HEC . . . G 7 5.289 39.678 36.342 1 15.85 ? C3D HEC 200 C 1 HETATM 37 C C4D HEC . . . G 7 6.171 39.603 37.453 1 12.32 ? C4D HEC 200 C 1 HETATM 38 C CMD HEC . . . G 7 2.89 38.951 35.8 1 5.6 ? CMD HEC 200 C 1 HETATM 39 C CAD HEC . . . G 7 5.643 40.376 35.053 1 21.38 ? CAD HEC 200 C 1 HETATM 40 C CBD HEC . . . G 7 5.625 41.907 35.077 1 20.68 ? CBD HEC 200 C 1 HETATM 41 C CGD HEC . . . G 7 6.23 42.541 33.812 1 22.64 ? CGD HEC 200 C 1 HETATM 42 O O1D HEC . . . G 7 6.214 43.768 33.692 1 25.47 ? O1D HEC 200 C 1 HETATM 43 O O2D HEC . . . G 7 6.772 41.855 32.944 1 25.87 ? O2D HEC 200 C 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 43 #