data_2MY5 # _model_server_result.job_id Tgw5LvKzD_rWJ7b3dAwxGw _model_server_result.datetime_utc '2024-10-19 15:44:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2my5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":101}' # _entry.id 2MY5 # _exptl.entry_id 2MY5 _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 358.348 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N~3~-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-N-(2-sulfanylethyl)-beta-alaninamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 38 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 38 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id P _struct_conn.ptnr2_label_comp_id PN7 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id PN7 _struct_conn.ptnr2_auth_seq_id 101 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.612 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C11 H23 N2 O7 P S' _chem_comp.formula_weight 358.348 _chem_comp.id PN7 _chem_comp.mon_nstd_flag . _chem_comp.name N~3~-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-N-(2-sulfanylethyl)-beta-alaninamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2MY5 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id PN7 _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 101 _pdbx_nonpoly_scheme.auth_seq_num 38 _pdbx_nonpoly_scheme.pdb_mon_id PN7 _pdbx_nonpoly_scheme.auth_mon_id SAT _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O3 PN7 . . . B 2 1.719 -7.515 -14.026 1 0 ? O3 PN7 101 A 1 HETATM 2 O O4 PN7 . . . B 2 0.051 -5.559 -14.752 1 0 ? O4 PN7 101 A 1 HETATM 3 C C2 PN7 . . . B 2 2.529 -5.77 -12.579 1 0 ? C2 PN7 101 A 1 HETATM 4 C C1 PN7 . . . B 2 3.559 -6.675 -11.892 1 0 ? C1 PN7 101 A 1 HETATM 5 P P PN7 . . . B 2 3.94 -8.71 -10.583 1 0 ? P PN7 101 A 1 HETATM 6 O O1P PN7 . . . B 2 3.729 -9.842 -11.514 1 0 ? O1P PN7 101 A 1 HETATM 7 O O2P PN7 . . . B 2 5.285 -8.106 -10.452 1 0 ? O2P PN7 101 A 1 HETATM 8 O O3P PN7 . . . B 2 2.899 -7.541 -10.963 1 0 ? O3P PN7 101 A 1 HETATM 9 C CE1 PN7 . . . B 2 3.164 -5.121 -13.811 1 0 ? CE1 PN7 101 A 1 HETATM 10 C CE2 PN7 . . . B 2 2.072 -4.678 -11.609 1 0 ? CE2 PN7 101 A 1 HETATM 11 C C3 PN7 . . . B 2 1.321 -6.604 -13.01 1 0 ? C3 PN7 101 A 1 HETATM 12 C C4 PN7 . . . B 2 0.23 -5.684 -13.556 1 0 ? C4 PN7 101 A 1 HETATM 13 N N5 PN7 . . . B 2 -0.481 -5.013 -12.692 1 0 ? N5 PN7 101 A 1 HETATM 14 C C6 PN7 . . . B 2 -1.29 -5.74 -11.673 1 0 ? C6 PN7 101 A 1 HETATM 15 C C7 PN7 . . . B 2 -1.986 -6.933 -12.331 1 0 ? C7 PN7 101 A 1 HETATM 16 C C8 PN7 . . . B 2 -2.807 -7.687 -11.283 1 0 ? C8 PN7 101 A 1 HETATM 17 O O8 PN7 . . . B 2 -4.022 -7.652 -11.29 1 0 ? O8 PN7 101 A 1 HETATM 18 N N9 PN7 . . . B 2 -2.155 -8.402 -10.407 1 0 ? N9 PN7 101 A 1 HETATM 19 C C10 PN7 . . . B 2 -2.857 -9.477 -9.652 1 0 ? C10 PN7 101 A 1 HETATM 20 C C11 PN7 . . . B 2 -2.53 -10.835 -10.276 1 0 ? C11 PN7 101 A 1 HETATM 21 S S12 PN7 . . . B 2 -0.974 -10.719 -11.194 1 0 ? S12 PN7 101 A 1 HETATM 22 H H1 PN7 . . . B 2 2.278 -7.042 -14.646 1 0 ? H1 PN7 101 A 1 HETATM 23 H H2 PN7 . . . B 2 4.069 -7.269 -12.635 1 0 ? H2 PN7 101 A 1 HETATM 24 H H3 PN7 . . . B 2 4.278 -6.065 -11.366 1 0 ? H3 PN7 101 A 1 HETATM 25 H H5 PN7 . . . B 2 3.881 -4.378 -13.496 1 0 ? H5 PN7 101 A 1 HETATM 26 H H6 PN7 . . . B 2 2.397 -4.651 -14.407 1 0 ? H6 PN7 101 A 1 HETATM 27 H H7 PN7 . . . B 2 3.664 -5.877 -14.399 1 0 ? H7 PN7 101 A 1 HETATM 28 H H8 PN7 . . . B 2 1.53 -3.917 -12.151 1 0 ? H8 PN7 101 A 1 HETATM 29 H H9 PN7 . . . B 2 2.933 -4.233 -11.133 1 0 ? H9 PN7 101 A 1 HETATM 30 H H10 PN7 . . . B 2 1.428 -5.11 -10.857 1 0 ? H10 PN7 101 A 1 HETATM 31 H H11 PN7 . . . B 2 0.937 -7.148 -12.157 1 0 ? H11 PN7 101 A 1 HETATM 32 H H12 PN7 . . . B 2 -0.397 -4.037 -12.643 1 0 ? H12 PN7 101 A 1 HETATM 33 H H13 PN7 . . . B 2 -2.033 -5.073 -11.261 1 0 ? H13 PN7 101 A 1 HETATM 34 H H14 PN7 . . . B 2 -0.644 -6.091 -10.883 1 0 ? H14 PN7 101 A 1 HETATM 35 H H15 PN7 . . . B 2 -1.245 -7.597 -12.75 1 0 ? H15 PN7 101 A 1 HETATM 36 H H16 PN7 . . . B 2 -2.639 -6.581 -13.117 1 0 ? H16 PN7 101 A 1 HETATM 37 H H17 PN7 . . . B 2 -1.198 -8.248 -10.265 1 0 ? H17 PN7 101 A 1 HETATM 38 H H18 PN7 . . . B 2 -3.923 -9.309 -9.694 1 0 ? H18 PN7 101 A 1 HETATM 39 H H19 PN7 . . . B 2 -2.531 -9.466 -8.623 1 0 ? H19 PN7 101 A 1 HETATM 40 H H20 PN7 . . . B 2 -3.324 -11.123 -10.949 1 0 ? H20 PN7 101 A 1 HETATM 41 H H21 PN7 . . . B 2 -2.433 -11.576 -9.496 1 0 ? H21 PN7 101 A 1 HETATM 42 H H22 PN7 . . . B 2 -0.262 -10.619 -10.558 1 0 ? H22 PN7 101 A 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 6101 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 42 #