data_2MYB
#
_model_server_result.job_id            FGSiHH2kSoTsYJvaENsTbw 
_model_server_result.datetime_utc      '2024-10-10 17:09:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2myb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":155}' 
#
_entry.id    2MYB 
#
_exptl.entry_id    2MYB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              41.052 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'METHYL ISOCYANIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          106.08 
_cell.angle_gamma         90 
_cell.entry_id            2MYB 
_cell.length_a            64.64 
_cell.length_b            30.95 
_cell.length_c            34.95 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2MYB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 93 A HIS 93 1_555 C FE HEM . A HEM 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
metalc ? metalc2 C FE HEM . A HEM 154 1_555 D C MNC . A MNC 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.909 ? 
metalc ? metalc3 C FE HEM . A HEM 154 1_555 D N MNC . A MNC 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.056 ? 
#
_chem_comp.formula           'C2 H3 N' 
_chem_comp.formula_weight    41.052 
_chem_comp.id                MNC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'METHYL ISOCYANIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C N MNC trip 306 n n 
N C1 MNC sing 307 n n 
C1 H11 MNC sing 308 n n 
C1 H12 MNC sing 309 n n 
C1 H13 MNC sing 310 n n 
#
_atom_sites.entry_id                     2MYB 
_atom_sites.fract_transf_matrix[1][1]    0.01547 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004459 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.03231 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.029777 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 156 156 SO4 SO4 . 
C 3 HEM A 1 154 154 HEM HEM . 
D 4 MNC A 1 155 155 MNC MNC . 
E 5 HOH A 1 158 158 HOH HOH . 
E 5 HOH A 2 159 159 HOH HOH . 
E 5 HOH A 3 160 160 HOH HOH . 
E 5 HOH A 4 161 161 HOH HOH . 
E 5 HOH A 5 162 162 HOH HOH . 
E 5 HOH A 6 163 163 HOH HOH . 
E 5 HOH A 7 164 164 HOH HOH . 
E 5 HOH A 8 165 165 HOH HOH . 
E 5 HOH A 9 167 167 HOH HOH . 
E 5 HOH A 10 168 168 HOH HOH . 
E 5 HOH A 11 169 169 HOH HOH . 
E 5 HOH A 12 171 171 HOH HOH . 
E 5 HOH A 13 172 172 HOH HOH . 
E 5 HOH A 14 174 174 HOH HOH . 
E 5 HOH A 15 175 175 HOH HOH . 
E 5 HOH A 16 177 177 HOH HOH . 
E 5 HOH A 17 178 178 HOH HOH . 
E 5 HOH A 18 181 181 HOH HOH . 
E 5 HOH A 19 185 185 HOH HOH . 
E 5 HOH A 20 186 186 HOH HOH . 
E 5 HOH A 21 187 187 HOH HOH . 
E 5 HOH A 22 190 190 HOH HOH . 
E 5 HOH A 23 193 193 HOH HOH . 
E 5 HOH A 24 194 194 HOH HOH . 
E 5 HOH A 25 195 195 HOH HOH . 
E 5 HOH A 26 196 196 HOH HOH . 
E 5 HOH A 27 197 197 HOH HOH . 
E 5 HOH A 28 200 200 HOH HOH . 
E 5 HOH A 29 201 201 HOH HOH . 
E 5 HOH A 30 202 202 HOH HOH . 
E 5 HOH A 31 207 207 HOH HOH . 
E 5 HOH A 32 208 208 HOH HOH . 
E 5 HOH A 33 209 209 HOH HOH . 
E 5 HOH A 34 213 213 HOH HOH . 
E 5 HOH A 35 214 214 HOH HOH . 
E 5 HOH A 36 215 215 HOH HOH . 
E 5 HOH A 37 216 216 HOH HOH . 
E 5 HOH A 38 218 218 HOH HOH . 
E 5 HOH A 39 221 221 HOH HOH . 
E 5 HOH A 40 227 227 HOH HOH . 
E 5 HOH A 41 228 228 HOH HOH . 
E 5 HOH A 42 229 229 HOH HOH . 
E 5 HOH A 43 234 234 HOH HOH . 
E 5 HOH A 44 235 235 HOH HOH . 
E 5 HOH A 45 236 236 HOH HOH . 
E 5 HOH A 46 237 237 HOH HOH . 
E 5 HOH A 47 240 240 HOH HOH . 
E 5 HOH A 48 255 255 HOH HOH . 
E 5 HOH A 49 257 257 HOH HOH . 
E 5 HOH A 50 258 258 HOH HOH . 
E 5 HOH A 51 259 259 HOH HOH . 
E 5 HOH A 52 261 261 HOH HOH . 
E 5 HOH A 53 265 265 HOH HOH . 
E 5 HOH A 54 266 266 HOH HOH . 
E 5 HOH A 55 267 267 HOH HOH . 
E 5 HOH A 56 268 268 HOH HOH . 
E 5 HOH A 57 269 269 HOH HOH . 
E 5 HOH A 58 270 270 HOH HOH . 
E 5 HOH A 59 273 273 HOH HOH . 
E 5 HOH A 60 275 275 HOH HOH . 
E 5 HOH A 61 276 276 HOH HOH . 
E 5 HOH A 62 277 277 HOH HOH . 
E 5 HOH A 63 278 278 HOH HOH . 
E 5 HOH A 64 281 281 HOH HOH . 
E 5 HOH A 65 282 282 HOH HOH . 
E 5 HOH A 66 283 283 HOH HOH . 
E 5 HOH A 67 284 284 HOH HOH . 
E 5 HOH A 68 285 285 HOH HOH . 
E 5 HOH A 69 286 286 HOH HOH . 
E 5 HOH A 70 287 287 HOH HOH . 
E 5 HOH A 71 289 289 HOH HOH . 
E 5 HOH A 72 290 290 HOH HOH . 
E 5 HOH A 73 291 291 HOH HOH . 
E 5 HOH A 74 292 292 HOH HOH . 
E 5 HOH A 75 295 295 HOH HOH . 
E 5 HOH A 76 297 297 HOH HOH . 
E 5 HOH A 77 298 298 HOH HOH . 
E 5 HOH A 78 299 299 HOH HOH . 
E 5 HOH A 79 300 300 HOH HOH . 
E 5 HOH A 80 301 301 HOH HOH . 
E 5 HOH A 81 305 305 HOH HOH . 
E 5 HOH A 82 307 307 HOH HOH . 
E 5 HOH A 83 308 308 HOH HOH . 
E 5 HOH A 84 311 311 HOH HOH . 
E 5 HOH A 85 314 314 HOH HOH . 
E 5 HOH A 86 317 317 HOH HOH . 
E 5 HOH A 87 323 323 HOH HOH . 
E 5 HOH A 88 325 325 HOH HOH . 
E 5 HOH A 89 326 326 HOH HOH . 
E 5 HOH A 90 327 327 HOH HOH . 
E 5 HOH A 91 334 334 HOH HOH . 
E 5 HOH A 92 338 338 HOH HOH . 
E 5 HOH A 93 339 339 HOH HOH . 
E 5 HOH A 94 340 340 HOH HOH . 
E 5 HOH A 95 350 350 HOH HOH . 
E 5 HOH A 96 359 359 HOH HOH . 
E 5 HOH A 97 361 361 HOH HOH . 
E 5 HOH A 98 362 362 HOH HOH . 
E 5 HOH A 99 368 368 HOH HOH . 
E 5 HOH A 100 371 371 HOH HOH . 
E 5 HOH A 101 372 372 HOH HOH . 
E 5 HOH A 102 373 373 HOH HOH . 
E 5 HOH A 103 380 380 HOH HOH . 
E 5 HOH A 104 381 381 HOH HOH . 
E 5 HOH A 105 382 382 HOH HOH . 
E 5 HOH A 106 389 389 HOH HOH . 
E 5 HOH A 107 392 392 HOH HOH . 
E 5 HOH A 108 397 397 HOH HOH . 
E 5 HOH A 109 400 400 HOH HOH . 
E 5 HOH A 110 402 402 HOH HOH . 
E 5 HOH A 111 403 403 HOH HOH . 
E 5 HOH A 112 407 407 HOH HOH . 
E 5 HOH A 113 408 408 HOH HOH . 
E 5 HOH A 114 413 413 HOH HOH . 
E 5 HOH A 115 414 414 HOH HOH . 
E 5 HOH A 116 415 415 HOH HOH . 
E 5 HOH A 117 416 416 HOH HOH . 
E 5 HOH A 118 418 418 HOH HOH . 
E 5 HOH A 119 419 419 HOH HOH . 
E 5 HOH A 120 424 424 HOH HOH . 
E 5 HOH A 121 430 430 HOH HOH . 
E 5 HOH A 122 432 432 HOH HOH . 
E 5 HOH A 123 435 435 HOH HOH . 
E 5 HOH A 124 439 439 HOH HOH . 
E 5 HOH A 125 441 441 HOH HOH . 
E 5 HOH A 126 444 444 HOH HOH . 
E 5 HOH A 127 448 448 HOH HOH . 
E 5 HOH A 128 449 449 HOH HOH . 
E 5 HOH A 129 451 451 HOH HOH . 
E 5 HOH A 130 452 452 HOH HOH . 
E 5 HOH A 131 455 455 HOH HOH . 
E 5 HOH A 132 461 461 HOH HOH . 
E 5 HOH A 133 463 463 HOH HOH . 
E 5 HOH A 134 464 464 HOH HOH . 
E 5 HOH A 135 467 467 HOH HOH . 
E 5 HOH A 136 471 471 HOH HOH . 
E 5 HOH A 137 472 472 HOH HOH . 
E 5 HOH A 138 473 473 HOH HOH . 
E 5 HOH A 139 475 475 HOH HOH . 
E 5 HOH A 140 477 477 HOH HOH . 
E 5 HOH A 141 478 478 HOH HOH . 
E 5 HOH A 142 484 484 HOH HOH . 
E 5 HOH A 143 494 494 HOH HOH . 
E 5 HOH A 144 524 524 HOH HOH . 
E 5 HOH A 145 531 531 HOH HOH . 
E 5 HOH A 146 533 533 HOH HOH . 
E 5 HOH A 147 545 545 HOH HOH . 
E 5 HOH A 148 549 549 HOH HOH . 
E 5 HOH A 149 551 551 HOH HOH . 
E 5 HOH A 150 567 567 HOH HOH . 
E 5 HOH A 151 569 569 HOH HOH . 
E 5 HOH A 152 571 571 HOH HOH . 
E 5 HOH A 153 576 576 HOH HOH . 
E 5 HOH A 154 577 577 HOH HOH . 
E 5 HOH A 155 584 584 HOH HOH . 
E 5 HOH A 156 586 586 HOH HOH . 
E 5 HOH A 157 590 590 HOH HOH . 
E 5 HOH A 158 603 603 HOH HOH . 
E 5 HOH A 159 604 604 HOH HOH . 
E 5 HOH A 160 614 614 HOH HOH . 
E 5 HOH A 161 624 624 HOH HOH . 
E 5 HOH A 162 630 630 HOH HOH . 
E 5 HOH A 163 639 639 HOH HOH . 
E 5 HOH A 164 649 649 HOH HOH . 
E 5 HOH A 165 652 652 HOH HOH . 
E 5 HOH A 166 657 657 HOH HOH . 
E 5 HOH A 167 661 661 HOH HOH . 
E 5 HOH A 168 662 662 HOH HOH . 
E 5 HOH A 169 667 667 HOH HOH . 
E 5 HOH A 170 669 669 HOH HOH . 
E 5 HOH A 171 674 674 HOH HOH . 
E 5 HOH A 172 678 678 HOH HOH . 
E 5 HOH A 173 680 680 HOH HOH . 
E 5 HOH A 174 681 681 HOH HOH . 
E 5 HOH A 175 682 682 HOH HOH . 
E 5 HOH A 176 684 684 HOH HOH . 
E 5 HOH A 177 685 685 HOH HOH . 
E 5 HOH A 178 688 688 HOH HOH . 
E 5 HOH A 179 692 692 HOH HOH . 
E 5 HOH A 180 693 693 HOH HOH . 
E 5 HOH A 181 710 710 HOH HOH . 
E 5 HOH A 182 715 715 HOH HOH . 
E 5 HOH A 183 725 725 HOH HOH . 
E 5 HOH A 184 755 755 HOH HOH . 
E 5 HOH A 185 780 780 HOH HOH . 
E 5 HOH A 186 785 785 HOH HOH . 
E 5 HOH A 187 790 790 HOH HOH . 
E 5 HOH A 188 805 805 HOH HOH . 
E 5 HOH A 189 820 820 HOH HOH . 
E 5 HOH A 190 835 835 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C MNC . . . D 4 16.333 27.031 4.987 0.86 13.51 ? C MNC 155 A 1 
HETATM 2 N N MNC . . . D 4 17.478 26.739 4.853 0.86 14.42 ? N MNC 155 A 1 
HETATM 3 C C1 MNC . . . D 4 17.413 25.228 4.68 0.86 15.43 ? C1 MNC 155 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          15 
_model_server_stats.element_count           3 
#