data_2MZ9 # _model_server_result.job_id D9hC1wd-t83CsE2mkrPgTw _model_server_result.datetime_utc '2024-10-20 22:05:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2mz9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":101}' # _entry.id 2MZ9 # _exptl.entry_id 2MZ9 _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 618.503 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2MZ9 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2MZ9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 17 A HIS 17 1_555 B FE HEC . A HEC 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.911 ? metalc ? metalc2 A NE2 HIS 20 A HIS 20 1_555 C FE HEC . A HEC 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.874 ? metalc ? metalc3 A NE2 HIS 31 A HIS 31 1_555 B FE HEC . A HEC 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc4 A NE2 HIS 47 A HIS 47 1_555 D FE HEC . A HEC 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.886 ? metalc ? metalc5 A NE2 HIS 55 A HIS 55 1_555 C FE HEC . A HEC 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc6 A NE2 HIS 69 A HIS 69 1_555 D FE HEC . A HEC 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE NA HEC sing 103 n n FE NB HEC sing 104 n n FE NC HEC sing 105 n n FE ND HEC sing 106 n n CHA C1A HEC doub 107 n n CHA C4D HEC sing 108 n n CHA HHA HEC sing 109 n n CHB C4A HEC doub 110 n n CHB C1B HEC sing 111 n n CHB HHB HEC sing 112 n n CHC C4B HEC doub 113 n n CHC C1C HEC sing 114 n n CHC HHC HEC sing 115 n n CHD C4C HEC doub 116 n n CHD C1D HEC sing 117 n n CHD HHD HEC sing 118 n n NA C1A HEC sing 119 n y NA C4A HEC sing 120 n y C1A C2A HEC sing 121 n y C2A C3A HEC doub 122 n y C2A CAA HEC sing 123 n n C3A C4A HEC sing 124 n y C3A CMA HEC sing 125 n n CMA HMA1 HEC sing 126 n n CMA HMA2 HEC sing 127 n n CMA HMA3 HEC sing 128 n n CAA CBA HEC sing 129 n n CAA HAA1 HEC sing 130 n n CAA HAA2 HEC sing 131 n n CBA CGA HEC sing 132 n n CBA HBA1 HEC sing 133 n n CBA HBA2 HEC sing 134 n n CGA O1A HEC doub 135 n n CGA O2A HEC sing 136 n n O2A H2A HEC sing 137 n n NB C1B HEC sing 138 n y NB C4B HEC sing 139 n y C1B C2B HEC doub 140 n y C2B C3B HEC sing 141 n y C2B CMB HEC sing 142 n n C3B C4B HEC sing 143 n y C3B CAB HEC doub 144 e n CMB HMB1 HEC sing 145 n n CMB HMB2 HEC sing 146 n n CMB HMB3 HEC sing 147 n n CAB CBB HEC sing 148 n n CAB HAB HEC sing 149 n n CBB HBB1 HEC sing 150 n n CBB HBB2 HEC sing 151 n n CBB HBB3 HEC sing 152 n n NC C1C HEC sing 153 n y NC C4C HEC sing 154 n y C1C C2C HEC doub 155 n y C2C C3C HEC sing 156 n y C2C CMC HEC sing 157 n n C3C C4C HEC sing 158 n y C3C CAC HEC doub 159 e n CMC HMC1 HEC sing 160 n n CMC HMC2 HEC sing 161 n n CMC HMC3 HEC sing 162 n n CAC CBC HEC sing 163 n n CAC HAC HEC sing 164 n n CBC HBC1 HEC sing 165 n n CBC HBC2 HEC sing 166 n n CBC HBC3 HEC sing 167 n n ND C1D HEC sing 168 n y ND C4D HEC sing 169 n y C1D C2D HEC doub 170 n y C2D C3D HEC sing 171 n y C2D CMD HEC sing 172 n n C3D C4D HEC doub 173 n y C3D CAD HEC sing 174 n n CMD HMD1 HEC sing 175 n n CMD HMD2 HEC sing 176 n n CMD HMD3 HEC sing 177 n n CAD CBD HEC sing 178 n n CAD HAD1 HEC sing 179 n n CAD HAD2 HEC sing 180 n n CBD CGD HEC sing 181 n n CBD HBD1 HEC sing 182 n n CBD HBD2 HEC sing 183 n n CGD O1D HEC doub 184 n n CGD O2D HEC sing 185 n n O2D H2D HEC sing 186 n n # _atom_sites.entry_id 2MZ9 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEC A 1 101 130 HEC HEM . C 2 HEC A 1 102 154 HEC HEM . D 2 HEC A 1 103 168 HEC HEM . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . B 2 0.359 7.858 6.759 1 1 ? FE HEC 101 A 1 HETATM 2 C CHA HEC . . . B 2 -0.703 4.628 7.469 1 1 ? CHA HEC 101 A 1 HETATM 3 C CHB HEC . . . B 2 3.602 6.903 7.365 1 1 ? CHB HEC 101 A 1 HETATM 4 C CHC HEC . . . B 2 1.415 11.035 5.996 1 1 ? CHC HEC 101 A 1 HETATM 5 C CHD HEC . . . B 2 -2.962 8.851 6.586 1 1 ? CHD HEC 101 A 1 HETATM 6 N NA HEC . . . B 2 1.249 6.129 7.324 1 1 ? NA HEC 101 A 1 HETATM 7 C C1A HEC . . . B 2 0.661 4.893 7.53 1 1 ? C1A HEC 101 A 1 HETATM 8 C C2A HEC . . . B 2 1.669 3.901 7.821 1 1 ? C2A HEC 101 A 1 HETATM 9 C C3A HEC . . . B 2 2.864 4.529 7.793 1 1 ? C3A HEC 101 A 1 HETATM 10 C C4A HEC . . . B 2 2.607 5.916 7.484 1 1 ? C4A HEC 101 A 1 HETATM 11 C CMA HEC . . . B 2 4.223 3.939 8.032 1 1 ? CMA HEC 101 A 1 HETATM 12 C CAA HEC . . . B 2 1.393 2.452 8.098 1 1 ? CAA HEC 101 A 1 HETATM 13 C CBA HEC . . . B 2 1.931 1.503 7.031 1 1 ? CBA HEC 101 A 1 HETATM 14 C CGA HEC . . . B 2 1.875 2.141 5.651 1 1 ? CGA HEC 101 A 1 HETATM 15 O O1A HEC . . . B 2 0.824 2.747 5.349 1 1 ? O1A HEC 101 A 1 HETATM 16 O O2A HEC . . . B 2 2.883 2.012 4.924 1 1 ? O2A HEC 101 A 1 HETATM 17 N NB HEC . . . B 2 2.149 8.751 6.614 1 1 ? NB HEC 101 A 1 HETATM 18 C C1B HEC . . . B 2 3.356 8.238 7.057 1 1 ? C1B HEC 101 A 1 HETATM 19 C C2B HEC . . . B 2 4.341 9.289 7.158 1 1 ? C2B HEC 101 A 1 HETATM 20 C C3B HEC . . . B 2 3.737 10.435 6.78 1 1 ? C3B HEC 101 A 1 HETATM 21 C C4B HEC . . . B 2 2.373 10.105 6.44 1 1 ? C4B HEC 101 A 1 HETATM 22 C CMB HEC . . . B 2 5.76 9.096 7.607 1 1 ? CMB HEC 101 A 1 HETATM 23 C CAB HEC . . . B 2 4.331 11.812 6.709 1 1 ? CAB HEC 101 A 1 HETATM 24 C CBB HEC . . . B 2 5.517 12.026 7.646 1 1 ? CBB HEC 101 A 1 HETATM 25 N NC HEC . . . B 2 -0.608 9.569 6.297 1 1 ? NC HEC 101 A 1 HETATM 26 C C1C HEC . . . B 2 -0.018 10.805 6.096 1 1 ? C1C HEC 101 A 1 HETATM 27 C C2C HEC . . . B 2 -1.025 11.839 6.057 1 1 ? C2C HEC 101 A 1 HETATM 28 C C3C HEC . . . B 2 -2.22 11.238 6.233 1 1 ? C3C HEC 101 A 1 HETATM 29 C C4C HEC . . . B 2 -1.966 9.824 6.383 1 1 ? C4C HEC 101 A 1 HETATM 30 C CMC HEC . . . B 2 -0.746 13.301 5.856 1 1 ? CMC HEC 101 A 1 HETATM 31 C CAC HEC . . . B 2 -3.579 11.875 6.272 1 1 ? CAC HEC 101 A 1 HETATM 32 C CBC HEC . . . B 2 -4.005 12.508 4.951 1 1 ? CBC HEC 101 A 1 HETATM 33 N ND HEC . . . B 2 -1.458 6.939 6.998 1 1 ? ND HEC 101 A 1 HETATM 34 C C1D HEC . . . B 2 -2.711 7.51 6.854 1 1 ? C1D HEC 101 A 1 HETATM 35 C C2D HEC . . . B 2 -3.739 6.51 7.022 1 1 ? C2D HEC 101 A 1 HETATM 36 C C3D HEC . . . B 2 -3.116 5.338 7.266 1 1 ? C3D HEC 101 A 1 HETATM 37 C C4D HEC . . . B 2 -1.696 5.6 7.253 1 1 ? C4D HEC 101 A 1 HETATM 38 C CMD HEC . . . B 2 -5.214 6.771 6.931 1 1 ? CMD HEC 101 A 1 HETATM 39 C CAD HEC . . . B 2 -3.739 3.994 7.511 1 1 ? CAD HEC 101 A 1 HETATM 40 C CBD HEC . . . B 2 -4.021 3.7 8.982 1 1 ? CBD HEC 101 A 1 HETATM 41 C CGD HEC . . . B 2 -4.795 2.399 9.142 1 1 ? CGD HEC 101 A 1 HETATM 42 O O1D HEC . . . B 2 -5.396 1.969 8.134 1 1 ? O1D HEC 101 A 1 HETATM 43 O O2D HEC . . . B 2 -4.771 1.859 10.269 1 1 ? O2D HEC 101 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 310 _model_server_stats.query_time_ms 5189 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 43 #