data_2MZ9 # _model_server_result.job_id rRCG9bGXTDqJNsIZ3Dp9dQ _model_server_result.datetime_utc '2024-10-20 22:13:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2mz9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":102}' # _entry.id 2MZ9 # _exptl.entry_id 2MZ9 _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 618.503 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2MZ9 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2MZ9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 17 A HIS 17 1_555 B FE HEC . A HEC 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.911 ? metalc ? metalc2 A NE2 HIS 20 A HIS 20 1_555 C FE HEC . A HEC 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.874 ? metalc ? metalc3 A NE2 HIS 31 A HIS 31 1_555 B FE HEC . A HEC 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc4 A NE2 HIS 47 A HIS 47 1_555 D FE HEC . A HEC 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.886 ? metalc ? metalc5 A NE2 HIS 55 A HIS 55 1_555 C FE HEC . A HEC 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc6 A NE2 HIS 69 A HIS 69 1_555 D FE HEC . A HEC 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE NA HEC sing 103 n n FE NB HEC sing 104 n n FE NC HEC sing 105 n n FE ND HEC sing 106 n n CHA C1A HEC doub 107 n n CHA C4D HEC sing 108 n n CHA HHA HEC sing 109 n n CHB C4A HEC doub 110 n n CHB C1B HEC sing 111 n n CHB HHB HEC sing 112 n n CHC C4B HEC doub 113 n n CHC C1C HEC sing 114 n n CHC HHC HEC sing 115 n n CHD C4C HEC doub 116 n n CHD C1D HEC sing 117 n n CHD HHD HEC sing 118 n n NA C1A HEC sing 119 n y NA C4A HEC sing 120 n y C1A C2A HEC sing 121 n y C2A C3A HEC doub 122 n y C2A CAA HEC sing 123 n n C3A C4A HEC sing 124 n y C3A CMA HEC sing 125 n n CMA HMA1 HEC sing 126 n n CMA HMA2 HEC sing 127 n n CMA HMA3 HEC sing 128 n n CAA CBA HEC sing 129 n n CAA HAA1 HEC sing 130 n n CAA HAA2 HEC sing 131 n n CBA CGA HEC sing 132 n n CBA HBA1 HEC sing 133 n n CBA HBA2 HEC sing 134 n n CGA O1A HEC doub 135 n n CGA O2A HEC sing 136 n n O2A H2A HEC sing 137 n n NB C1B HEC sing 138 n y NB C4B HEC sing 139 n y C1B C2B HEC doub 140 n y C2B C3B HEC sing 141 n y C2B CMB HEC sing 142 n n C3B C4B HEC sing 143 n y C3B CAB HEC doub 144 e n CMB HMB1 HEC sing 145 n n CMB HMB2 HEC sing 146 n n CMB HMB3 HEC sing 147 n n CAB CBB HEC sing 148 n n CAB HAB HEC sing 149 n n CBB HBB1 HEC sing 150 n n CBB HBB2 HEC sing 151 n n CBB HBB3 HEC sing 152 n n NC C1C HEC sing 153 n y NC C4C HEC sing 154 n y C1C C2C HEC doub 155 n y C2C C3C HEC sing 156 n y C2C CMC HEC sing 157 n n C3C C4C HEC sing 158 n y C3C CAC HEC doub 159 e n CMC HMC1 HEC sing 160 n n CMC HMC2 HEC sing 161 n n CMC HMC3 HEC sing 162 n n CAC CBC HEC sing 163 n n CAC HAC HEC sing 164 n n CBC HBC1 HEC sing 165 n n CBC HBC2 HEC sing 166 n n CBC HBC3 HEC sing 167 n n ND C1D HEC sing 168 n y ND C4D HEC sing 169 n y C1D C2D HEC doub 170 n y C2D C3D HEC sing 171 n y C2D CMD HEC sing 172 n n C3D C4D HEC doub 173 n y C3D CAD HEC sing 174 n n CMD HMD1 HEC sing 175 n n CMD HMD2 HEC sing 176 n n CMD HMD3 HEC sing 177 n n CAD CBD HEC sing 178 n n CAD HAD1 HEC sing 179 n n CAD HAD2 HEC sing 180 n n CBD CGD HEC sing 181 n n CBD HBD1 HEC sing 182 n n CBD HBD2 HEC sing 183 n n CGD O1D HEC doub 184 n n CGD O2D HEC sing 185 n n O2D H2D HEC sing 186 n n # _atom_sites.entry_id 2MZ9 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEC A 1 101 130 HEC HEM . C 2 HEC A 1 102 154 HEC HEM . D 2 HEC A 1 103 168 HEC HEM . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . C 2 -7.895 13.103 0.496 1 1 ? FE HEC 102 A 1 HETATM 2 C CHA HEC . . . C 2 -7.93 14.367 -2.649 1 1 ? CHA HEC 102 A 1 HETATM 3 C CHB HEC . . . C 2 -9.607 10.242 -0.674 1 1 ? CHB HEC 102 A 1 HETATM 4 C CHC HEC . . . C 2 -8.007 11.681 3.695 1 1 ? CHC HEC 102 A 1 HETATM 5 C CHD HEC . . . C 2 -6.495 15.925 1.737 1 1 ? CHD HEC 102 A 1 HETATM 6 N NA HEC . . . C 2 -8.649 12.446 -1.279 1 1 ? NA HEC 102 A 1 HETATM 7 C C1A HEC . . . C 2 -8.502 13.109 -2.484 1 1 ? C1A HEC 102 A 1 HETATM 8 C C2A HEC . . . C 2 -9.028 12.309 -3.565 1 1 ? C2A HEC 102 A 1 HETATM 9 C C3A HEC . . . C 2 -9.493 11.165 -3.02 1 1 ? C3A HEC 102 A 1 HETATM 10 C C4A HEC . . . C 2 -9.26 11.246 -1.598 1 1 ? C4A HEC 102 A 1 HETATM 11 C CMA HEC . . . C 2 -10.138 10.004 -3.721 1 1 ? CMA HEC 102 A 1 HETATM 12 C CAA HEC . . . C 2 -9.035 12.715 -5.01 1 1 ? CAA HEC 102 A 1 HETATM 13 C CBA HEC . . . C 2 -7.8 12.266 -5.786 1 1 ? CBA HEC 102 A 1 HETATM 14 C CGA HEC . . . C 2 -7.773 10.753 -5.946 1 1 ? CGA HEC 102 A 1 HETATM 15 O O1A HEC . . . C 2 -6.8 10.147 -5.447 1 1 ? O1A HEC 102 A 1 HETATM 16 O O2A HEC . . . C 2 -8.726 10.231 -6.564 1 1 ? O2A HEC 102 A 1 HETATM 17 N NB HEC . . . C 2 -8.663 11.321 1.334 1 1 ? NB HEC 102 A 1 HETATM 18 C C1B HEC . . . C 2 -9.312 10.285 0.684 1 1 ? C1B HEC 102 A 1 HETATM 19 C C2B HEC . . . C 2 -9.648 9.239 1.621 1 1 ? C2B HEC 102 A 1 HETATM 20 C C3B HEC . . . C 2 -9.206 9.634 2.833 1 1 ? C3B HEC 102 A 1 HETATM 21 C C4B HEC . . . C 2 -8.592 10.93 2.659 1 1 ? C4B HEC 102 A 1 HETATM 22 C CMB HEC . . . C 2 -10.358 7.965 1.267 1 1 ? CMB HEC 102 A 1 HETATM 23 C CAB HEC . . . C 2 -9.31 8.902 4.139 1 1 ? CAB HEC 102 A 1 HETATM 24 C CBB HEC . . . C 2 -8.621 7.54 4.144 1 1 ? CBB HEC 102 A 1 HETATM 25 N NC HEC . . . C 2 -7.223 13.644 2.376 1 1 ? NC HEC 102 A 1 HETATM 26 C C1C HEC . . . C 2 -7.514 13.056 3.594 1 1 ? C1C HEC 102 A 1 HETATM 27 C C2C HEC . . . C 2 -7.341 14.009 4.665 1 1 ? C2C HEC 102 A 1 HETATM 28 C C3C HEC . . . C 2 -6.947 15.171 4.102 1 1 ? C3C HEC 102 A 1 HETATM 29 C C4C HEC . . . C 2 -6.872 14.949 2.678 1 1 ? C4C HEC 102 A 1 HETATM 30 C CMC HEC . . . C 2 -7.568 13.717 6.12 1 1 ? CMC HEC 102 A 1 HETATM 31 C CAC HEC . . . C 2 -6.635 16.47 4.787 1 1 ? CAC HEC 102 A 1 HETATM 32 C CBC HEC . . . C 2 -5.261 16.509 5.449 1 1 ? CBC HEC 102 A 1 HETATM 33 N ND HEC . . . C 2 -7.428 14.831 -0.268 1 1 ? ND HEC 102 A 1 HETATM 34 C C1D HEC . . . C 2 -6.676 15.807 0.363 1 1 ? C1D HEC 102 A 1 HETATM 35 C C2D HEC . . . C 2 -6.096 16.7 -0.612 1 1 ? C2D HEC 102 A 1 HETATM 36 C C3D HEC . . . C 2 -6.492 16.271 -1.829 1 1 ? C3D HEC 102 A 1 HETATM 37 C C4D HEC . . . C 2 -7.321 15.108 -1.62 1 1 ? C4D HEC 102 A 1 HETATM 38 C CMD HEC . . . C 2 -5.22 17.875 -0.286 1 1 ? CMD HEC 102 A 1 HETATM 39 C CAD HEC . . . C 2 -6.158 16.858 -3.169 1 1 ? CAD HEC 102 A 1 HETATM 40 C CBD HEC . . . C 2 -5.339 15.934 -4.065 1 1 ? CBD HEC 102 A 1 HETATM 41 C CGD HEC . . . C 2 -5.076 16.576 -5.42 1 1 ? CGD HEC 102 A 1 HETATM 42 O O1D HEC . . . C 2 -4.995 15.81 -6.405 1 1 ? O1D HEC 102 A 1 HETATM 43 O O2D HEC . . . C 2 -4.962 17.821 -5.447 1 1 ? O2D HEC 102 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 93 _model_server_stats.query_time_ms 5200 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 43 #