data_2N9I # _model_server_result.job_id PkIRdey_DKS-zieyKf0arA _model_server_result.datetime_utc '2024-10-31 07:27:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2n9i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":500}' # _entry.id 2N9I # _exptl.entry_id 2N9I _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 618.503 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 14 A CYS 14 1_555 B CAB HEC . A HEC 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.81 ? covale ? covale2 A SG CYS 17 A CYS 17 1_555 B CAC HEC . A HEC 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.884 ? metalc ? metalc1 A NE2 HIS 18 A HIS 18 1_555 B FE HEC . A HEC 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.913 ? metalc ? metalc2 A SD MET 80 A MET 80 1_555 B FE HEC . A HEC 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2N9I _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id HEC _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 500 _pdbx_nonpoly_scheme.auth_seq_num 500 _pdbx_nonpoly_scheme.pdb_mon_id HEC _pdbx_nonpoly_scheme.auth_mon_id HEC _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . B 2 -1.568 6.763 -19.667 1 71.04 ? FE HEC 500 A 1 HETATM 2 C CHA HEC . . . B 2 0.029 9.586 -20.871 1 72.53 ? CHA HEC 500 A 1 HETATM 3 C CHB HEC . . . B 2 -0.106 7.239 -16.603 1 20.13 ? CHB HEC 500 A 1 HETATM 4 C CHC HEC . . . B 2 -3.718 4.479 -18.465 1 71.13 ? CHC HEC 500 A 1 HETATM 5 C CHD HEC . . . B 2 -2.611 6.07 -22.93 1 64.24 ? CHD HEC 500 A 1 HETATM 6 N NA HEC . . . B 2 -0.332 8.198 -18.865 1 31.31 ? NA HEC 500 A 1 HETATM 7 C C1A HEC . . . B 2 0.18 9.248 -19.546 1 11.23 ? C1A HEC 500 A 1 HETATM 8 C C2A HEC . . . B 2 1.048 9.968 -18.667 1 11.44 ? C2A HEC 500 A 1 HETATM 9 C C3A HEC . . . B 2 1.044 9.318 -17.456 1 60.3 ? C3A HEC 500 A 1 HETATM 10 C C4A HEC . . . B 2 0.172 8.172 -17.599 1 22.22 ? C4A HEC 500 A 1 HETATM 11 C CMA HEC . . . B 2 1.762 9.768 -16.209 1 33.41 ? CMA HEC 500 A 1 HETATM 12 C CAA HEC . . . B 2 1.921 11.114 -19.093 1 41.22 ? CAA HEC 500 A 1 HETATM 13 C CBA HEC . . . B 2 3.17 10.688 -19.868 1 51.34 ? CBA HEC 500 A 1 HETATM 14 C CGA HEC . . . B 2 3.625 9.311 -19.41 1 30.41 ? CGA HEC 500 A 1 HETATM 15 O O1A HEC . . . B 2 3.49 9.032 -18.2 1 2.34 ? O1A HEC 500 A 1 HETATM 16 O O2A HEC . . . B 2 4.027 8.528 -20.299 1 70.54 ? O2A HEC 500 A 1 HETATM 17 N NB HEC . . . B 2 -1.798 5.936 -17.883 1 12.31 ? NB HEC 500 A 1 HETATM 18 C C1B HEC . . . B 2 -1.072 6.239 -16.769 1 45.44 ? C1B HEC 500 A 1 HETATM 19 C C2B HEC . . . B 2 -1.496 5.331 -15.734 1 54.04 ? C2B HEC 500 A 1 HETATM 20 C C3B HEC . . . B 2 -2.605 4.661 -16.209 1 54.24 ? C3B HEC 500 A 1 HETATM 21 C C4B HEC . . . B 2 -2.756 5.02 -17.6 1 43.12 ? C4B HEC 500 A 1 HETATM 22 C CMB HEC . . . B 2 -0.825 5.153 -14.398 1 63.04 ? CMB HEC 500 A 1 HETATM 23 C CAB HEC . . . B 2 -3.476 3.674 -15.459 1 62.05 ? CAB HEC 500 A 1 HETATM 24 C CBB HEC . . . B 2 -3.755 4.022 -13.994 1 3.42 ? CBB HEC 500 A 1 HETATM 25 N NC HEC . . . B 2 -2.907 5.46 -20.553 1 51.3 ? NC HEC 500 A 1 HETATM 26 C C1C HEC . . . B 2 -3.674 4.61 -19.848 1 22.43 ? C1C HEC 500 A 1 HETATM 27 C C2C HEC . . . B 2 -4.406 3.79 -20.791 1 32.31 ? C2C HEC 500 A 1 HETATM 28 C C3C HEC . . . B 2 -3.977 4.145 -22.052 1 23.12 ? C3C HEC 500 A 1 HETATM 29 C C4C HEC . . . B 2 -3.121 5.299 -21.888 1 64.52 ? C4C HEC 500 A 1 HETATM 30 C CMC HEC . . . B 2 -5.289 2.611 -20.454 1 61.32 ? CMC HEC 500 A 1 HETATM 31 C CAC HEC . . . B 2 -4.249 3.418 -23.364 1 60.14 ? CAC HEC 500 A 1 HETATM 32 C CBC HEC . . . B 2 -5.724 3.398 -23.781 1 75.24 ? CBC HEC 500 A 1 HETATM 33 N ND HEC . . . B 2 -1.311 7.657 -21.562 1 1.32 ? ND HEC 500 A 1 HETATM 34 C C1D HEC . . . B 2 -1.803 7.181 -22.736 1 53.21 ? C1D HEC 500 A 1 HETATM 35 C C2D HEC . . . B 2 -1.364 8.074 -23.785 1 41.41 ? C2D HEC 500 A 1 HETATM 36 C C3D HEC . . . B 2 -0.668 9.093 -23.185 1 64.12 ? C3D HEC 500 A 1 HETATM 37 C C4D HEC . . . B 2 -0.622 8.799 -21.782 1 4.05 ? C4D HEC 500 A 1 HETATM 38 C CMD HEC . . . B 2 -1.641 7.95 -25.259 1 55.1 ? CMD HEC 500 A 1 HETATM 39 C CAD HEC . . . B 2 -0.174 10.352 -23.854 1 73.33 ? CAD HEC 500 A 1 HETATM 40 C CBD HEC . . . B 2 -1.214 11.466 -23.767 1 42.42 ? CBD HEC 500 A 1 HETATM 41 C CGD HEC . . . B 2 -1.109 12.248 -22.474 1 43.31 ? CGD HEC 500 A 1 HETATM 42 O O1D HEC . . . B 2 -1.501 11.7 -21.426 1 34.31 ? O1D HEC 500 A 1 HETATM 43 O O2D HEC . . . B 2 -0.663 13.41 -22.54 1 23.53 ? O2D HEC 500 A 1 HETATM 44 H HHA HEC . . . B 2 0.526 10.46 -21.237 1 53.14 ? HHA HEC 500 A 1 HETATM 45 H HHB HEC . . . B 2 0.361 7.362 -15.642 1 13.14 ? HHB HEC 500 A 1 HETATM 46 H HHC HEC . . . B 2 -4.457 3.823 -18.06 1 44.45 ? HHC HEC 500 A 1 HETATM 47 H HHD HEC . . . B 2 -2.944 5.873 -23.93 1 2.34 ? HHD HEC 500 A 1 HETATM 48 H HMA1 HEC . . . B 2 2.094 8.909 -15.629 1 53.44 ? HMA1 HEC 500 A 1 HETATM 49 H HMA2 HEC . . . B 2 2.635 10.366 -16.471 1 72.22 ? HMA2 HEC 500 A 1 HETATM 50 H HMA3 HEC . . . B 2 1.082 10.378 -15.615 1 42.13 ? HMA3 HEC 500 A 1 HETATM 51 H HAA1 HEC . . . B 2 1.368 11.847 -19.674 1 10.23 ? HAA1 HEC 500 A 1 HETATM 52 H HAA2 HEC . . . B 2 2.197 11.648 -18.214 1 10.34 ? HAA2 HEC 500 A 1 HETATM 53 H HBA1 HEC . . . B 2 2.959 10.665 -20.937 1 13.42 ? HBA1 HEC 500 A 1 HETATM 54 H HBA2 HEC . . . B 2 3.974 11.4 -19.681 1 10.01 ? HBA2 HEC 500 A 1 HETATM 55 H HMB1 HEC . . . B 2 -0.82 4.096 -14.141 1 53.12 ? HMB1 HEC 500 A 1 HETATM 56 H HMB2 HEC . . . B 2 0.213 5.477 -14.437 1 75.23 ? HMB2 HEC 500 A 1 HETATM 57 H HMB3 HEC . . . B 2 -1.357 5.731 -13.644 1 42.11 ? HMB3 HEC 500 A 1 HETATM 58 H HAB HEC . . . B 2 -4.466 3.693 -15.9 1 41.44 ? HAB HEC 500 A 1 HETATM 59 H HBB1 HEC . . . B 2 -2.821 4.186 -13.451 1 71.31 ? HBB1 HEC 500 A 1 HETATM 60 H HBB2 HEC . . . B 2 -4.347 4.933 -13.993 1 11.14 ? HBB2 HEC 500 A 1 HETATM 61 H HBB3 HEC . . . B 2 -4.323 3.256 -13.486 1 22.31 ? HBB3 HEC 500 A 1 HETATM 62 H HMC1 HEC . . . B 2 -4.702 1.697 -20.54 1 22.32 ? HMC1 HEC 500 A 1 HETATM 63 H HMC2 HEC . . . B 2 -5.688 2.677 -19.445 1 52.33 ? HMC2 HEC 500 A 1 HETATM 64 H HMC3 HEC . . . B 2 -6.132 2.565 -21.136 1 32.21 ? HMC3 HEC 500 A 1 HETATM 65 H HAC HEC . . . B 2 -3.719 3.93 -24.159 1 33.3 ? HAC HEC 500 A 1 HETATM 66 H HBC1 HEC . . . B 2 -5.817 3.057 -24.813 1 11.02 ? HBC1 HEC 500 A 1 HETATM 67 H HBC2 HEC . . . B 2 -6.271 2.718 -23.128 1 0.13 ? HBC2 HEC 500 A 1 HETATM 68 H HBC3 HEC . . . B 2 -6.162 4.388 -23.679 1 54.22 ? HBC3 HEC 500 A 1 HETATM 69 H HMD1 HEC . . . B 2 -0.97 7.22 -25.694 1 3.32 ? HMD1 HEC 500 A 1 HETATM 70 H HMD2 HEC . . . B 2 -2.672 7.638 -25.43 1 53.44 ? HMD2 HEC 500 A 1 HETATM 71 H HMD3 HEC . . . B 2 -1.452 8.905 -25.747 1 34.43 ? HMD3 HEC 500 A 1 HETATM 72 H HAD1 HEC . . . B 2 0.761 10.722 -23.445 1 44.11 ? HAD1 HEC 500 A 1 HETATM 73 H HAD2 HEC . . . B 2 0.054 10.11 -24.879 1 54.44 ? HAD2 HEC 500 A 1 HETATM 74 H HBD1 HEC . . . B 2 -1.06 12.173 -24.581 1 11.44 ? HBD1 HEC 500 A 1 HETATM 75 H HBD2 HEC . . . B 2 -2.206 11.022 -23.86 1 64.4 ? HBD2 HEC 500 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 33 _model_server_stats.query_time_ms 6293 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 75 #