# Name: MGD # Created by ModelServer 0.9.12 # model_server_result.job_id: vXi4ZoR0MuKjyBYS4BX2PA # model_server_result.datetime_utc: 2025-07-12 01:02:02 # model_server_result.server_version: 0.9.12 # model_server_result.query_name: ligand # model_server_result.source_id: pdb-bcif # model_server_result.entry_id: 2nap # model_server_params.name: atom_site # model_server_params.value: {"label_asym_id":"D","auth_seq_id":811} # model_server_stats.io_time_ms: 49 # model_server_stats.parse_time_ms: 11 # model_server_stats.create_model_time_ms: 18 # model_server_stats.query_time_ms: 285 # model_server_stats.encode_time_ms: 0 # model_server_stats.element_count: 47 @MOLECULE MGD 47 52 1 **** **** @ATOM 1 PB 63.345 18.472 -3.112 P.3 1 MGD 0.000 2 O1B 63.193 19.717 -3.892 O.2 1 MGD 0.000 3 O2B 63.763 18.734 -1.715 O.3 1 MGD 0.000 4 O3B 64.353 17.457 -3.791 O.3 1 MGD 0.000 5 O3A 66.197 15.818 -3.880 O.3 1 MGD 0.000 6 PA 64.542 15.845 -3.682 P.3 1 MGD 0.000 7 O1A 63.859 15.255 -4.845 O.2 1 MGD 0.000 8 O2A 64.138 15.498 -2.292 O.3 1 MGD 0.000 9 O5' 61.947 17.624 -3.081 O.3 1 MGD 0.000 10 C5' 61.066 17.829 -1.961 C.3 1 MGD 0.000 11 C4' 59.654 18.032 -2.482 C.3 1 MGD 0.000 12 O4' 58.916 18.261 -1.254 O.3 1 MGD 0.000 13 C3' 59.389 19.123 -3.489 C.3 1 MGD 0.000 14 O3' 58.802 18.671 -4.678 O.3 1 MGD 0.000 15 C2' 58.453 20.003 -2.672 C.3 1 MGD 0.000 16 O2' 57.528 20.827 -3.284 O.3 1 MGD 0.000 17 C1' 57.869 19.152 -1.708 C.3 1 MGD 0.000 18 N9 57.232 19.410 -0.441 N.ar 1 MGD 0.000 19 C8 57.639 20.463 0.318 C.ar 1 MGD 0.000 20 N7 56.963 20.470 1.484 N.ar 1 MGD 0.000 21 C5 56.117 19.337 1.377 C.ar 1 MGD 0.000 22 C6 55.154 18.746 2.298 C.2 1 MGD 0.000 23 O6 54.910 19.186 3.422 O.2 1 MGD 0.000 24 N1 54.523 17.630 1.841 N.am 1 MGD 0.000 25 C2 54.762 17.084 0.607 C.cat 1 MGD 0.000 26 N2 54.090 16.035 0.322 N.pl3 1 MGD 0.000 27 N3 55.660 17.578 -0.310 N.2 1 MGD 0.000 28 C4 56.297 18.674 0.111 C.ar 1 MGD 0.000 29 C10 67.086 15.529 -2.771 C.3 1 MGD 0.000 30 C11 68.201 14.718 -3.249 C.3 1 MGD 0.000 31 O11 68.682 15.199 -4.519 O.3 1 MGD 0.000 32 C12 69.322 14.791 -2.234 C.2 1 MGD 0.000 33 S12 68.996 15.070 -0.520 S.3 1 MGD 0.000 34 C13 70.663 14.648 -2.588 C.2 1 MGD 0.000 35 S13 71.724 14.759 -1.155 S.3 1 MGD 0.000 36 C14 70.952 14.435 -4.034 C.3 1 MGD 0.000 37 N15 71.819 15.525 -4.438 N.pl3 1 MGD 0.000 38 C16 72.163 15.536 -5.793 C.2 1 MGD 0.000 39 C17 73.371 16.020 -6.272 C.2 1 MGD 0.000 40 O17 74.184 16.449 -5.548 O.2 1 MGD 0.000 41 N18 73.588 15.987 -7.620 N.am 1 MGD 0.000 42 C19 72.682 15.508 -8.519 C.cat 1 MGD 0.000 43 N19 73.020 15.533 -9.819 N.pl3 1 MGD 0.000 44 N20 71.507 15.035 -8.064 N.2 1 MGD 0.000 45 C21 71.232 15.034 -6.727 C.2 1 MGD 0.000 46 N22 69.979 14.495 -6.282 N.am 1 MGD 0.000 47 C23 69.634 14.402 -4.866 C.3 1 MGD 0.000 @BOND 1 1 2 2 2 1 3 1 3 1 4 1 4 1 9 1 5 4 6 1 6 5 6 1 7 5 29 1 8 6 7 2 9 6 8 1 10 9 10 1 11 10 11 1 12 11 12 1 13 11 13 1 14 12 17 1 15 13 14 1 16 13 15 1 17 15 16 1 18 15 17 1 19 17 18 1 20 18 19 ar 21 18 28 ar 22 19 20 ar 23 20 21 ar 24 21 22 1 25 21 28 ar 26 22 23 2 27 22 24 1 28 24 25 1 29 25 26 1 30 25 27 2 31 27 28 1 32 29 30 1 33 30 31 1 34 30 32 1 35 31 47 1 36 32 33 1 37 32 34 2 38 34 35 1 39 34 36 1 40 36 37 1 41 36 47 1 42 37 38 1 43 38 39 1 44 38 45 2 45 39 40 2 46 39 41 1 47 41 42 1 48 42 43 1 49 42 44 2 50 44 45 1 51 45 46 1 52 46 47 1 @SUBSTRUCTURE 1 MGD 1