data_2NMT # _model_server_result.job_id ikM_YxIbwTwTJ7TDdi3new _model_server_result.datetime_utc '2024-11-02 08:27:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2nmt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":700}' # _entry.id 2NMT # _exptl.entry_id 2NMT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 596.804 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[CYCLOHEXYLETHYL]-[[[[4-[2-METHYL-1-IMIDAZOLYL-BUTYL]PHENYL]ACETYL]-SERYL]-LYSINYL]-AMINE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2NMT _cell.length_a 105.4 _cell.length_b 105.4 _cell.length_c 106.7 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2NMT _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id L _struct_conn.ptnr1_label_atom_id O2 _struct_conn.ptnr1_label_comp_id GOL _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id GOL _struct_conn.ptnr1_auth_seq_id 809 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id OD1 _struct_conn.ptnr2_label_comp_id ASP _struct_conn.ptnr2_label_seq_id 99 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id ASP _struct_conn.ptnr2_auth_seq_id 132 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.997 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C33 H52 N6 O4' _chem_comp.formula_weight 596.804 _chem_comp.id MIM _chem_comp.mon_nstd_flag . _chem_comp.name '[CYCLOHEXYLETHYL]-[[[[4-[2-METHYL-1-IMIDAZOLYL-BUTYL]PHENYL]ACETYL]-SERYL]-LYSINYL]-AMINE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2NMT _atom_sites.fract_transf_matrix[1][1] 0.009488 _atom_sites.fract_transf_matrix[1][2] 0.005478 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010955 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009372 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NHM A 1 500 500 NHM NHM . C 3 MIM A 1 700 700 MIM MIM . D 4 GOL A 1 801 801 GOL GOL . E 4 GOL A 1 802 802 GOL GOL . F 4 GOL A 1 803 803 GOL GOL . G 4 GOL A 1 804 804 GOL GOL . H 4 GOL A 1 805 805 GOL GOL . I 4 GOL A 1 806 806 GOL GOL . J 4 GOL A 1 807 807 GOL GOL . K 4 GOL A 1 808 808 GOL GOL . L 4 GOL A 1 809 809 GOL GOL . M 4 GOL A 1 810 810 GOL GOL . N 4 GOL A 1 811 811 GOL GOL . O 4 GOL A 1 812 812 GOL GOL . P 5 HOH A 1 1002 1002 HOH HOH . P 5 HOH A 2 1003 1003 HOH HOH . P 5 HOH A 3 1005 1005 HOH HOH . P 5 HOH A 4 1006 1006 HOH HOH . P 5 HOH A 5 1007 1007 HOH HOH . P 5 HOH A 6 1009 1009 HOH HOH . P 5 HOH A 7 1011 1011 HOH HOH . P 5 HOH A 8 1012 1012 HOH HOH . P 5 HOH A 9 1013 1013 HOH HOH . P 5 HOH A 10 1015 1015 HOH HOH . P 5 HOH A 11 1016 1016 HOH HOH . P 5 HOH A 12 1017 1017 HOH HOH . P 5 HOH A 13 1019 1019 HOH HOH . P 5 HOH A 14 1021 1021 HOH HOH . P 5 HOH A 15 1024 1024 HOH HOH . P 5 HOH A 16 1026 1026 HOH HOH . P 5 HOH A 17 1028 1028 HOH HOH . P 5 HOH A 18 1034 1034 HOH HOH . P 5 HOH A 19 1036 1036 HOH HOH . P 5 HOH A 20 1038 1038 HOH HOH . P 5 HOH A 21 1041 1041 HOH HOH . P 5 HOH A 22 1043 1043 HOH HOH . P 5 HOH A 23 1046 1046 HOH HOH . P 5 HOH A 24 1052 1052 HOH HOH . P 5 HOH A 25 1054 1054 HOH HOH . P 5 HOH A 26 1055 1055 HOH HOH . P 5 HOH A 27 1056 1056 HOH HOH . P 5 HOH A 28 1060 1060 HOH HOH . P 5 HOH A 29 1061 1061 HOH HOH . P 5 HOH A 30 1068 1068 HOH HOH . P 5 HOH A 31 1071 1071 HOH HOH . P 5 HOH A 32 1073 1073 HOH HOH . P 5 HOH A 33 1075 1075 HOH HOH . P 5 HOH A 34 1077 1077 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CIB MIM . . . C 3 27.921 29.272 77.507 1 37.77 ? CIB MIM 700 A 1 HETATM 2 N NGB MIM . . . C 3 28.915 30.435 75.42 1 34.41 ? NGB MIM 700 A 1 HETATM 3 C CBB MIM . . . C 3 27.836 29.861 76.089 1 35.36 ? CBB MIM 700 A 1 HETATM 4 N NAB MIM . . . C 3 26.682 29.924 75.242 1 35.19 ? NAB MIM 700 A 1 HETATM 5 C CEB MIM . . . C 3 27.093 30.545 74.053 1 35.82 ? CEB MIM 700 A 1 HETATM 6 C CDB MIM . . . C 3 28.471 30.857 74.172 1 33.76 ? CDB MIM 700 A 1 HETATM 7 C C9B MIM . . . C 3 25.307 29.417 75.587 1 33.41 ? C9B MIM 700 A 1 HETATM 8 C C8B MIM . . . C 3 24.167 29.737 74.57 1 31.72 ? C8B MIM 700 A 1 HETATM 9 C C7B MIM . . . C 3 23.15 30.804 75.156 1 29.59 ? C7B MIM 700 A 1 HETATM 10 C C6B MIM . . . C 3 23.965 32.066 75.202 1 28.94 ? C6B MIM 700 A 1 HETATM 11 C C3B MIM . . . C 3 23.984 32.789 73.838 1 28.17 ? C3B MIM 700 A 1 HETATM 12 C C2B MIM . . . C 3 25.008 33.761 73.696 1 29.55 ? C2B MIM 700 A 1 HETATM 13 C C1B MIM . . . C 3 25.205 34.41 72.505 1 29.86 ? C1B MIM 700 A 1 HETATM 14 C C0B MIM . . . C 3 24.38 34.108 71.375 1 32.67 ? C0B MIM 700 A 1 HETATM 15 C C5B MIM . . . C 3 23.33 33.12 71.478 1 27.19 ? C5B MIM 700 A 1 HETATM 16 C C4B MIM . . . C 3 23.143 32.441 72.719 1 25.77 ? C4B MIM 700 A 1 HETATM 17 C CAB MIM . . . C 3 24.641 34.892 70.065 1 32.59 ? CAB MIM 700 A 1 HETATM 18 C CB MIM . . . C 3 24.245 36.274 70.351 1 36.58 ? CB MIM 700 A 1 HETATM 19 O OB MIM . . . C 3 23.386 36.488 71.192 1 44.32 ? OB MIM 700 A 1 HETATM 20 N NS MIM . . . C 3 24.765 37.248 69.718 1 36.93 ? NS MIM 700 A 1 HETATM 21 C CAS MIM . . . C 3 24.303 38.615 70.054 1 38.26 ? CAS MIM 700 A 1 HETATM 22 C CS MIM . . . C 3 24.897 39.561 69.107 1 38.96 ? CS MIM 700 A 1 HETATM 23 O OS MIM . . . C 3 25.682 39.206 68.279 1 41.75 ? OS MIM 700 A 1 HETATM 24 C CBS MIM . . . C 3 24.833 38.955 71.511 1 35.21 ? CBS MIM 700 A 1 HETATM 25 O OGS MIM . . . C 3 24.209 40.065 72.165 1 30.72 ? OGS MIM 700 A 1 HETATM 26 N NK MIM . . . C 3 24.515 40.794 69.178 1 40.96 ? NK MIM 700 A 1 HETATM 27 C CAK MIM . . . C 3 25.037 41.766 68.257 1 37.45 ? CAK MIM 700 A 1 HETATM 28 C CK MIM . . . C 3 24.515 43.137 68.528 1 38.23 ? CK MIM 700 A 1 HETATM 29 O OK MIM . . . C 3 23.701 43.41 69.467 1 39.23 ? OK MIM 700 A 1 HETATM 30 C CBK MIM . . . C 3 24.745 41.374 66.764 1 33.21 ? CBK MIM 700 A 1 HETATM 31 C CGK MIM . . . C 3 23.328 40.88 66.487 1 32.16 ? CGK MIM 700 A 1 HETATM 32 C CDK MIM . . . C 3 22.752 41.398 65.19 1 32.4 ? CDK MIM 700 A 1 HETATM 33 C CEK MIM . . . C 3 21.655 40.468 64.682 1 27.81 ? CEK MIM 700 A 1 HETATM 34 N NZK MIM . . . C 3 20.497 40.631 65.554 1 25.06 ? NZK MIM 700 A 1 HETATM 35 N NY MIM . . . C 3 25.049 44.024 67.71 1 33.66 ? NY MIM 700 A 1 HETATM 36 C CAY MIM . . . C 3 24.78 45.424 67.819 1 30.84 ? CAY MIM 700 A 1 HETATM 37 C CBY MIM . . . C 3 26.031 45.844 68.576 1 29.52 ? CBY MIM 700 A 1 HETATM 38 C CGY MIM . . . C 3 26.29 47.328 68.505 1 29.03 ? CGY MIM 700 A 1 HETATM 39 C CKY MIM . . . C 3 25.726 48.024 69.79 1 30.18 ? CKY MIM 700 A 1 HETATM 40 C CHY MIM . . . C 3 26.017 49.515 69.7 1 22.44 ? CHY MIM 700 A 1 HETATM 41 C CZY MIM . . . C 3 27.551 49.708 69.624 1 28.39 ? CZY MIM 700 A 1 HETATM 42 C CEY MIM . . . C 3 28.1 49.05 68.321 1 29.42 ? CEY MIM 700 A 1 HETATM 43 C CDY MIM . . . C 3 27.827 47.541 68.376 1 29.19 ? CDY MIM 700 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 43 #