data_2NMT # _model_server_result.job_id 956bnDEaEQzyKlAfREp7eQ _model_server_result.datetime_utc '2024-12-02 10:02:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2nmt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":801}' # _entry.id 2NMT # _exptl.entry_id 2NMT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2NMT _cell.length_a 105.4 _cell.length_b 105.4 _cell.length_c 106.7 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2NMT _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id L _struct_conn.ptnr1_label_atom_id O2 _struct_conn.ptnr1_label_comp_id GOL _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id GOL _struct_conn.ptnr1_auth_seq_id 809 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id OD1 _struct_conn.ptnr2_label_comp_id ASP _struct_conn.ptnr2_label_seq_id 99 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id ASP _struct_conn.ptnr2_auth_seq_id 132 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.997 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # _atom_sites.entry_id 2NMT _atom_sites.fract_transf_matrix[1][1] 0.009488 _atom_sites.fract_transf_matrix[1][2] 0.005478 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010955 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009372 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NHM A 1 500 500 NHM NHM . C 3 MIM A 1 700 700 MIM MIM . D 4 GOL A 1 801 801 GOL GOL . E 4 GOL A 1 802 802 GOL GOL . F 4 GOL A 1 803 803 GOL GOL . G 4 GOL A 1 804 804 GOL GOL . H 4 GOL A 1 805 805 GOL GOL . I 4 GOL A 1 806 806 GOL GOL . J 4 GOL A 1 807 807 GOL GOL . K 4 GOL A 1 808 808 GOL GOL . L 4 GOL A 1 809 809 GOL GOL . M 4 GOL A 1 810 810 GOL GOL . N 4 GOL A 1 811 811 GOL GOL . O 4 GOL A 1 812 812 GOL GOL . P 5 HOH A 1 1002 1002 HOH HOH . P 5 HOH A 2 1003 1003 HOH HOH . P 5 HOH A 3 1005 1005 HOH HOH . P 5 HOH A 4 1006 1006 HOH HOH . P 5 HOH A 5 1007 1007 HOH HOH . P 5 HOH A 6 1009 1009 HOH HOH . P 5 HOH A 7 1011 1011 HOH HOH . P 5 HOH A 8 1012 1012 HOH HOH . P 5 HOH A 9 1013 1013 HOH HOH . P 5 HOH A 10 1015 1015 HOH HOH . P 5 HOH A 11 1016 1016 HOH HOH . P 5 HOH A 12 1017 1017 HOH HOH . P 5 HOH A 13 1019 1019 HOH HOH . P 5 HOH A 14 1021 1021 HOH HOH . P 5 HOH A 15 1024 1024 HOH HOH . P 5 HOH A 16 1026 1026 HOH HOH . P 5 HOH A 17 1028 1028 HOH HOH . P 5 HOH A 18 1034 1034 HOH HOH . P 5 HOH A 19 1036 1036 HOH HOH . P 5 HOH A 20 1038 1038 HOH HOH . P 5 HOH A 21 1041 1041 HOH HOH . P 5 HOH A 22 1043 1043 HOH HOH . P 5 HOH A 23 1046 1046 HOH HOH . P 5 HOH A 24 1052 1052 HOH HOH . P 5 HOH A 25 1054 1054 HOH HOH . P 5 HOH A 26 1055 1055 HOH HOH . P 5 HOH A 27 1056 1056 HOH HOH . P 5 HOH A 28 1060 1060 HOH HOH . P 5 HOH A 29 1061 1061 HOH HOH . P 5 HOH A 30 1068 1068 HOH HOH . P 5 HOH A 31 1071 1071 HOH HOH . P 5 HOH A 32 1073 1073 HOH HOH . P 5 HOH A 33 1075 1075 HOH HOH . P 5 HOH A 34 1077 1077 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 4 27.271 55.075 70.117 1 72.14 ? C1 GOL 801 A 1 HETATM 2 O O1 GOL . . . D 4 26.621 54.003 70.858 1 71.08 ? O1 GOL 801 A 1 HETATM 3 C C2 GOL . . . D 4 26.263 55.689 69.084 1 72.54 ? C2 GOL 801 A 1 HETATM 4 O O2 GOL . . . D 4 26.814 56.744 68.313 1 70.58 ? O2 GOL 801 A 1 HETATM 5 C C3 GOL . . . D 4 24.983 56.219 69.759 1 73.06 ? C3 GOL 801 A 1 HETATM 6 O O3 GOL . . . D 4 24.08 56.765 68.831 1 72.36 ? O3 GOL 801 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 6 #