data_2NMV # _model_server_result.job_id dWTPvU1PvXpQ2omVo1eBOw _model_server_result.datetime_utc '2024-12-01 02:08:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2nmv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":103}' # _entry.id 2NMV # _exptl.entry_id 2NMV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 73.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-METHYLACETAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2NMV _cell.length_a 74.41 _cell.length_b 95.597 _cell.length_c 97.878 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2NMV _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id C7 _struct_conn.ptnr1_label_comp_id DT _struct_conn.ptnr1_label_seq_id 3 _struct_conn.ptnr1_auth_asym_id D _struct_conn.ptnr1_auth_comp_id DT _struct_conn.ptnr1_auth_seq_id 3 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id D _struct_conn.ptnr2_label_atom_id C1 _struct_conn.ptnr2_label_comp_id NML _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id D _struct_conn.ptnr2_auth_comp_id NML _struct_conn.ptnr2_auth_seq_id 103 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.568 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H7 N O' _chem_comp.formula_weight 73.094 _chem_comp.id NML _chem_comp.mon_nstd_flag . _chem_comp.name N-METHYLACETAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NML sing 356 n n C1 H11 NML sing 357 n n C1 H12 NML sing 358 n n C1 H13 NML sing 359 n n C2 N3 NML sing 360 n n C2 O2 NML doub 361 n n N3 HN3 NML sing 362 n n N3 C3 NML sing 363 n n C3 H31 NML sing 364 n n C3 H32 NML sing 365 n n C3 H33 NML sing 366 n n # _atom_sites.entry_id 2NMV _atom_sites.fract_transf_matrix[1][1] 0.013439 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010461 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010217 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NML D 1 103 3 NML TFL . E 5 FLU D 1 600 600 FLU FLU . F 6 ADP A 1 662 500 ADP ADP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NML . . . D 4 -7.126 -5.581 -15.964 1 64.22 ? C1 NML 103 D 1 HETATM 2 C C2 NML . . . D 4 -8.055 -5.176 -17.142 1 65.53 ? C2 NML 103 D 1 HETATM 3 O O2 NML . . . D 4 -7.991 -4.086 -17.734 1 64.63 ? O2 NML 103 D 1 HETATM 4 N N3 NML . . . D 4 -8.986 -6.106 -17.473 1 65.78 ? N3 NML 103 D 1 HETATM 5 C C3 NML . . . D 4 -10.04 -6.09 -18.491 1 64.63 ? C3 NML 103 D 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #