data_2NNI
#
_model_server_result.job_id            Cd_HXFrwCvJvZZTygn-4vw 
_model_server_result.datetime_utc      '2024-10-17 14:13:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2nni 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":500}' 
#
_entry.id    2NNI 
#
_exptl.entry_id    2NNI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2NNI 
_cell.length_a            74.14 
_cell.length_b            140.52 
_cell.length_c            164.54 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2NNI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   metalc 
_struct_conn.details                        ? 
_struct_conn.id                             metalc1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             417 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              435 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            C 
_struct_conn.ptnr2_label_atom_id            FE 
_struct_conn.ptnr2_label_comp_id            HEM 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             HEM 
_struct_conn.ptnr2_auth_seq_id              500 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.322 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 129 n n 
CHA C4D HEM doub 130 n n 
CHA HHA HEM sing 131 n n 
CHB C4A HEM sing 132 n n 
CHB C1B HEM doub 133 n n 
CHB HHB HEM sing 134 n n 
CHC C4B HEM sing 135 n n 
CHC C1C HEM doub 136 n n 
CHC HHC HEM sing 137 n n 
CHD C4C HEM doub 138 n n 
CHD C1D HEM sing 139 n n 
CHD HHD HEM sing 140 n n 
C1A C2A HEM doub 141 n y 
C1A NA HEM sing 142 n y 
C2A C3A HEM sing 143 n y 
C2A CAA HEM sing 144 n n 
C3A C4A HEM doub 145 n y 
C3A CMA HEM sing 146 n n 
C4A NA HEM sing 147 n y 
CMA HMA HEM sing 148 n n 
CMA HMAA HEM sing 149 n n 
CMA HMAB HEM sing 150 n n 
CAA CBA HEM sing 151 n n 
CAA HAA HEM sing 152 n n 
CAA HAAA HEM sing 153 n n 
CBA CGA HEM sing 154 n n 
CBA HBA HEM sing 155 n n 
CBA HBAA HEM sing 156 n n 
CGA O1A HEM doub 157 n n 
CGA O2A HEM sing 158 n n 
C1B C2B HEM sing 159 n n 
C1B NB HEM sing 160 n n 
C2B C3B HEM doub 161 n n 
C2B CMB HEM sing 162 n n 
C3B C4B HEM sing 163 n n 
C3B CAB HEM sing 164 n n 
C4B NB HEM doub 165 n n 
CMB HMB HEM sing 166 n n 
CMB HMBA HEM sing 167 n n 
CMB HMBB HEM sing 168 n n 
CAB CBB HEM doub 169 n n 
CAB HAB HEM sing 170 n n 
CBB HBB HEM sing 171 n n 
CBB HBBA HEM sing 172 n n 
C1C C2C HEM sing 173 n y 
C1C NC HEM sing 174 n y 
C2C C3C HEM doub 175 n y 
C2C CMC HEM sing 176 n n 
C3C C4C HEM sing 177 n y 
C3C CAC HEM sing 178 n n 
C4C NC HEM sing 179 n y 
CMC HMC HEM sing 180 n n 
CMC HMCA HEM sing 181 n n 
CMC HMCB HEM sing 182 n n 
CAC CBC HEM doub 183 n n 
CAC HAC HEM sing 184 n n 
CBC HBC HEM sing 185 n n 
CBC HBCA HEM sing 186 n n 
C1D C2D HEM sing 187 n n 
C1D ND HEM doub 188 n n 
C2D C3D HEM doub 189 n n 
C2D CMD HEM sing 190 n n 
C3D C4D HEM sing 191 n n 
C3D CAD HEM sing 192 n n 
C4D ND HEM sing 193 n n 
CMD HMD HEM sing 194 n n 
CMD HMDA HEM sing 195 n n 
CMD HMDB HEM sing 196 n n 
CAD CBD HEM sing 197 n n 
CAD HAD HEM sing 198 n n 
CAD HADA HEM sing 199 n n 
CBD CGD HEM sing 200 n n 
CBD HBD HEM sing 201 n n 
CBD HBDA HEM sing 202 n n 
CGD O1D HEM doub 203 n n 
CGD O2D HEM sing 204 n n 
O2A H2A HEM sing 205 n n 
O2D H2D HEM sing 206 n n 
FE NA HEM sing 207 n n 
FE NB HEM sing 208 n n 
FE NC HEM sing 209 n n 
FE ND HEM sing 210 n n 
#
_atom_sites.entry_id                     2NNI 
_atom_sites.fract_transf_matrix[1][1]    0.013488 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007116 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006078 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 503 503 SO4 SO4 . 
C 3 HEM A 1 500 500 HEM HEM . 
D 4 MTK A 1 501 501 MTK MTK . 
E 5 PLM A 1 502 502 PLM PLM . 
F 6 HOH A 1 1 1 HOH HOH . 
F 6 HOH A 2 2 2 HOH HOH . 
F 6 HOH A 3 3 3 HOH HOH . 
F 6 HOH A 4 4 4 HOH HOH . 
F 6 HOH A 5 5 5 HOH HOH . 
F 6 HOH A 6 6 6 HOH HOH . 
F 6 HOH A 7 7 7 HOH HOH . 
F 6 HOH A 8 8 8 HOH HOH . 
F 6 HOH A 9 9 9 HOH HOH . 
F 6 HOH A 10 10 10 HOH HOH . 
F 6 HOH A 11 11 11 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . C 3 52.55 21.539 -26.552 1 48.34 ? CHA HEM 500 A 1 
HETATM 2 C CHB HEM . . . C 3 48.485 23.837 -27.068 1 47.47 ? CHB HEM 500 A 1 
HETATM 3 C CHC HEM . . . C 3 48.456 22.768 -31.621 1 49.7 ? CHC HEM 500 A 1 
HETATM 4 C CHD HEM . . . C 3 52.681 20.819 -31.192 1 49.63 ? CHD HEM 500 A 1 
HETATM 5 C C1A HEM . . . C 3 51.298 22.042 -26.179 1 48.64 ? C1A HEM 500 A 1 
HETATM 6 C C2A HEM . . . C 3 50.877 22.387 -24.883 1 48.75 ? C2A HEM 500 A 1 
HETATM 7 C C3A HEM . . . C 3 49.665 23.054 -25.049 1 48.55 ? C3A HEM 500 A 1 
HETATM 8 C C4A HEM . . . C 3 49.428 23.076 -26.429 1 48.19 ? C4A HEM 500 A 1 
HETATM 9 C CMA HEM . . . C 3 48.72 23.675 -23.945 1 46.49 ? CMA HEM 500 A 1 
HETATM 10 C CAA HEM . . . C 3 51.643 22.066 -23.597 1 49.57 ? CAA HEM 500 A 1 
HETATM 11 C CBA HEM . . . C 3 52.62 23.117 -23.175 1 51.22 ? CBA HEM 500 A 1 
HETATM 12 C CGA HEM . . . C 3 53.343 22.783 -21.901 1 53.07 ? CGA HEM 500 A 1 
HETATM 13 O O1A HEM . . . C 3 52.954 23.27 -20.847 1 54.94 ? O1A HEM 500 A 1 
HETATM 14 O O2A HEM . . . C 3 54.299 22.033 -21.899 1 53.72 ? O2A HEM 500 A 1 
HETATM 15 C C1B HEM . . . C 3 47.932 23.669 -28.324 1 47.29 ? C1B HEM 500 A 1 
HETATM 16 C C2B HEM . . . C 3 46.77 24.293 -28.84 1 46.85 ? C2B HEM 500 A 1 
HETATM 17 C C3B HEM . . . C 3 46.768 23.96 -30.215 1 47.44 ? C3B HEM 500 A 1 
HETATM 18 C C4B HEM . . . C 3 47.934 23.165 -30.395 1 48.59 ? C4B HEM 500 A 1 
HETATM 19 C CMB HEM . . . C 3 45.798 25.121 -28.032 1 49.59 ? CMB HEM 500 A 1 
HETATM 20 C CAB HEM . . . C 3 45.849 24.307 -31.247 1 46.67 ? CAB HEM 500 A 1 
HETATM 21 C CBB HEM . . . C 3 44.379 24.478 -31.229 1 48.73 ? CBB HEM 500 A 1 
HETATM 22 C C1C HEM . . . C 3 49.743 22.467 -32.012 1 49.09 ? C1C HEM 500 A 1 
HETATM 23 C C2C HEM . . . C 3 50.13 22.218 -33.321 1 49.7 ? C2C HEM 500 A 1 
HETATM 24 C C3C HEM . . . C 3 51.378 21.583 -33.243 1 49.09 ? C3C HEM 500 A 1 
HETATM 25 C C4C HEM . . . C 3 51.65 21.501 -31.843 1 49.42 ? C4C HEM 500 A 1 
HETATM 26 C CMC HEM . . . C 3 49.325 22.577 -34.618 1 50.96 ? CMC HEM 500 A 1 
HETATM 27 C CAC HEM . . . C 3 52.221 21.112 -34.211 1 47.59 ? CAC HEM 500 A 1 
HETATM 28 C CBC HEM . . . C 3 53.466 21.622 -34.646 1 45.46 ? CBC HEM 500 A 1 
HETATM 29 C C1D HEM . . . C 3 53.018 20.777 -29.882 1 49.18 ? C1D HEM 500 A 1 
HETATM 30 C C2D HEM . . . C 3 54.122 20.074 -29.353 1 49.16 ? C2D HEM 500 A 1 
HETATM 31 C C3D HEM . . . C 3 54.082 20.221 -27.993 1 49.72 ? C3D HEM 500 A 1 
HETATM 32 C C4D HEM . . . C 3 52.936 21.022 -27.767 1 49.26 ? C4D HEM 500 A 1 
HETATM 33 C CMD HEM . . . C 3 55.188 19.277 -30.139 1 48.4 ? CMD HEM 500 A 1 
HETATM 34 C CAD HEM . . . C 3 55.071 19.64 -26.919 1 50.34 ? CAD HEM 500 A 1 
HETATM 35 C CBD HEM . . . C 3 56.261 20.611 -26.611 1 50.72 ? CBD HEM 500 A 1 
HETATM 36 C CGD HEM . . . C 3 57.305 20.166 -25.56 1 50.37 ? CGD HEM 500 A 1 
HETATM 37 O O1D HEM . . . C 3 56.991 19.395 -24.678 1 50.48 ? O1D HEM 500 A 1 
HETATM 38 O O2D HEM . . . C 3 58.472 20.607 -25.621 1 47.97 ? O2D HEM 500 A 1 
HETATM 39 N NA HEM . . . C 3 50.387 22.478 -27.092 1 47.24 ? NA HEM 500 A 1 
HETATM 40 N NB HEM . . . C 3 48.589 23.016 -29.269 1 47.45 ? NB HEM 500 A 1 
HETATM 41 N NC HEM . . . C 3 50.64 22.045 -31.151 1 48.1 ? NC HEM 500 A 1 
HETATM 42 N ND HEM . . . C 3 52.336 21.326 -28.922 1 48.72 ? ND HEM 500 A 1 
HETATM 43 FE FE HEM . . . C 3 50.491 22.224 -29.116 1 47.37 ? FE HEM 500 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           43 
#