data_2NOE # _model_server_result.job_id MJCOWf3xjexHMIabkZsrDA _model_server_result.datetime_utc '2024-11-16 00:48:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2noe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":302}' # _entry.id 2NOE # _exptl.entry_id 2NOE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2NOE _cell.length_a 91.87 _cell.length_b 91.87 _cell.length_c 211.799 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2NOE _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B O3' DA 7 C DA 24 1_555 B P 8OG 8 C 8OG 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.599 ? covale ? covale2 B O3' 8OG 8 C 8OG 25 1_555 B P DG 9 C DG 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.602 ? metalc ? metalc1 B OP2 DA 7 C DA 24 1_555 D CA CA . C CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.139 ? metalc ? metalc2 B OP1 DC 11 C DC 28 1_555 E CA CA . C CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.04 ? metalc ? metalc3 B OP2 DC 11 C DC 28 1_555 E CA CA . C CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.865 ? metalc ? metalc4 D CA CA . C CA 301 1_555 G O HOH . C HOH 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.954 ? metalc ? metalc5 E CA CA . C CA 302 1_555 C O CYS 239 A CYS 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.697 ? metalc ? metalc6 E CA CA . C CA 302 1_555 C O VAL 244 A VAL 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.022 ? metalc ? metalc7 E CA CA . C CA 302 1_555 H O HOH . A HOH 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.738 ? hydrog 'DG-DC PAIR' hydrog1 A N2 DG 2 B DG 3 1_555 B O2 DC 14 C DC 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N3 DT 3 B DT 4 1_555 B N1 DA 13 C DA 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O4 DT 3 B DT 4 1_555 B N6 DA 13 C DA 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N1 DG 5 B DG 6 1_555 B N3 DC 11 C DC 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N2 DG 5 B DG 6 1_555 B O2 DC 11 C DC 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O6 DG 5 B DG 6 1_555 B N4 DC 11 C DC 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N1 DA 6 B DA 7 1_555 B N3 DT 10 C DT 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N6 DA 6 B DA 7 1_555 B O4 DT 10 C DT 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N3 DC 7 B DC 8 1_555 B N1 DG 9 C DG 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N4 DC 7 B DC 8 1_555 B O6 DG 9 C DG 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A O2 DC 7 B DC 8 1_555 B N2 DG 9 C DG 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N3 DT 9 B DT 10 1_555 B N1 DA 7 C DA 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A O4 DT 9 B DT 10 1_555 B N6 DA 7 C DA 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N1 DG 10 B DG 11 1_555 B N3 DC 6 C DC 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N2 DG 10 B DG 11 1_555 B O2 DC 6 C DC 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A O6 DG 10 B DG 11 1_555 B N4 DC 6 C DC 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-DC PAIR' hydrog17 A N1 DG 11 B DG 12 1_555 B N3 DC 5 C DC 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A N1 DA 12 B DA 13 1_555 B N3 DT 4 C DT 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A N6 DA 12 B DA 13 1_555 B O4 DT 4 C DT 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A N3 DC 13 B DC 14 1_555 B N1 DG 3 C DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A N4 DC 13 B DC 14 1_555 B O6 DG 3 C DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A O2 DC 13 B DC 14 1_555 B N2 DG 3 C DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-DC PAIR' hydrog23 A N1 DG 14 B DG 15 1_555 B N3 DC 2 C DC 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2NOE _atom_sites.fract_transf_matrix[1][1] 0.010885 _atom_sites.fract_transf_matrix[1][2] 0.006284 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012569 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004721 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CA C 1 301 301 CA CA . E 4 CA C 1 302 302 CA CA . F 5 HOH B 1 192 192 HOH HOH . F 5 HOH B 2 196 196 HOH HOH . F 5 HOH B 3 263 263 HOH HOH . F 5 HOH B 4 271 271 HOH HOH . F 5 HOH B 5 273 273 HOH HOH . G 5 HOH C 1 303 4 HOH TIP . G 5 HOH C 2 304 24 HOH TIP . G 5 HOH C 3 305 68 HOH TIP . G 5 HOH C 4 306 99 HOH TIP . G 5 HOH C 5 307 107 HOH TIP . G 5 HOH C 6 308 248 HOH HOH . G 5 HOH C 7 309 249 HOH HOH . H 5 HOH A 1 328 1 HOH TIP . H 5 HOH A 2 329 2 HOH TIP . H 5 HOH A 3 330 3 HOH TIP . H 5 HOH A 4 331 5 HOH TIP . H 5 HOH A 5 332 6 HOH TIP . H 5 HOH A 6 333 7 HOH TIP . H 5 HOH A 7 334 8 HOH TIP . H 5 HOH A 8 335 9 HOH TIP . H 5 HOH A 9 336 10 HOH TIP . H 5 HOH A 10 337 11 HOH TIP . H 5 HOH A 11 338 12 HOH TIP . H 5 HOH A 12 339 13 HOH TIP . H 5 HOH A 13 340 14 HOH TIP . H 5 HOH A 14 341 15 HOH TIP . H 5 HOH A 15 342 16 HOH TIP . H 5 HOH A 16 343 17 HOH TIP . H 5 HOH A 17 344 18 HOH TIP . H 5 HOH A 18 345 19 HOH TIP . H 5 HOH A 19 346 20 HOH TIP . H 5 HOH A 20 347 21 HOH TIP . H 5 HOH A 21 348 22 HOH TIP . H 5 HOH A 22 349 23 HOH TIP . H 5 HOH A 23 350 25 HOH TIP . H 5 HOH A 24 351 26 HOH TIP . H 5 HOH A 25 352 27 HOH TIP . H 5 HOH A 26 353 28 HOH TIP . H 5 HOH A 27 354 29 HOH TIP . H 5 HOH A 28 355 30 HOH TIP . H 5 HOH A 29 356 31 HOH TIP . H 5 HOH A 30 357 32 HOH TIP . H 5 HOH A 31 358 33 HOH TIP . H 5 HOH A 32 359 34 HOH TIP . H 5 HOH A 33 360 35 HOH TIP . H 5 HOH A 34 361 36 HOH TIP . H 5 HOH A 35 362 37 HOH TIP . H 5 HOH A 36 363 39 HOH TIP . H 5 HOH A 37 364 40 HOH TIP . H 5 HOH A 38 365 41 HOH TIP . H 5 HOH A 39 366 42 HOH TIP . H 5 HOH A 40 367 43 HOH TIP . H 5 HOH A 41 368 45 HOH TIP . H 5 HOH A 42 369 46 HOH TIP . H 5 HOH A 43 370 47 HOH TIP . H 5 HOH A 44 371 48 HOH TIP . H 5 HOH A 45 372 49 HOH TIP . H 5 HOH A 46 373 50 HOH TIP . H 5 HOH A 47 374 51 HOH TIP . H 5 HOH A 48 375 52 HOH TIP . H 5 HOH A 49 376 54 HOH TIP . H 5 HOH A 50 377 55 HOH TIP . H 5 HOH A 51 378 56 HOH TIP . H 5 HOH A 52 379 57 HOH TIP . H 5 HOH A 53 380 58 HOH TIP . H 5 HOH A 54 381 59 HOH TIP . H 5 HOH A 55 382 60 HOH TIP . H 5 HOH A 56 383 61 HOH TIP . H 5 HOH A 57 384 62 HOH TIP . H 5 HOH A 58 385 63 HOH TIP . H 5 HOH A 59 386 64 HOH TIP . H 5 HOH A 60 387 65 HOH TIP . H 5 HOH A 61 388 66 HOH TIP . H 5 HOH A 62 389 67 HOH TIP . H 5 HOH A 63 390 69 HOH TIP . H 5 HOH A 64 391 70 HOH TIP . H 5 HOH A 65 392 71 HOH TIP . H 5 HOH A 66 393 72 HOH TIP . H 5 HOH A 67 394 73 HOH TIP . H 5 HOH A 68 395 74 HOH TIP . H 5 HOH A 69 396 75 HOH TIP . H 5 HOH A 70 397 76 HOH TIP . H 5 HOH A 71 398 78 HOH TIP . H 5 HOH A 72 399 79 HOH TIP . H 5 HOH A 73 400 81 HOH TIP . H 5 HOH A 74 401 82 HOH TIP . H 5 HOH A 75 402 83 HOH TIP . H 5 HOH A 76 403 84 HOH TIP . H 5 HOH A 77 404 85 HOH TIP . H 5 HOH A 78 405 86 HOH TIP . H 5 HOH A 79 406 87 HOH TIP . H 5 HOH A 80 407 88 HOH TIP . H 5 HOH A 81 408 90 HOH TIP . H 5 HOH A 82 409 91 HOH TIP . H 5 HOH A 83 410 95 HOH TIP . H 5 HOH A 84 411 97 HOH TIP . H 5 HOH A 85 412 98 HOH TIP . H 5 HOH A 86 413 103 HOH TIP . H 5 HOH A 87 414 108 HOH TIP . H 5 HOH A 88 415 109 HOH TIP . H 5 HOH A 89 416 110 HOH TIP . H 5 HOH A 90 417 111 HOH TIP . H 5 HOH A 91 418 112 HOH TIP . H 5 HOH A 92 419 113 HOH TIP . H 5 HOH A 93 420 114 HOH TIP . H 5 HOH A 94 421 115 HOH TIP . H 5 HOH A 95 422 116 HOH TIP . H 5 HOH A 96 423 118 HOH TIP . H 5 HOH A 97 424 119 HOH TIP . H 5 HOH A 98 425 120 HOH TIP . H 5 HOH A 99 426 122 HOH TIP . H 5 HOH A 100 427 123 HOH TIP . H 5 HOH A 101 428 124 HOH TIP . H 5 HOH A 102 429 125 HOH TIP . H 5 HOH A 103 430 126 HOH TIP . H 5 HOH A 104 431 127 HOH TIP . H 5 HOH A 105 432 128 HOH TIP . H 5 HOH A 106 433 129 HOH TIP . H 5 HOH A 107 434 130 HOH TIP . H 5 HOH A 108 435 131 HOH TIP . H 5 HOH A 109 436 132 HOH TIP . H 5 HOH A 110 437 133 HOH TIP . H 5 HOH A 111 438 134 HOH TIP . H 5 HOH A 112 439 138 HOH TIP . H 5 HOH A 113 440 139 HOH TIP . H 5 HOH A 114 441 143 HOH TIP . H 5 HOH A 115 442 146 HOH TIP . H 5 HOH A 116 443 147 HOH TIP . H 5 HOH A 117 444 150 HOH TIP . H 5 HOH A 118 445 155 HOH TIP . H 5 HOH A 119 446 156 HOH TIP . H 5 HOH A 120 447 157 HOH TIP . H 5 HOH A 121 448 159 HOH TIP . H 5 HOH A 122 449 162 HOH TIP . H 5 HOH A 123 450 163 HOH TIP . H 5 HOH A 124 451 167 HOH TIP . H 5 HOH A 125 452 168 HOH TIP . H 5 HOH A 126 453 170 HOH TIP . H 5 HOH A 127 454 172 HOH TIP . H 5 HOH A 128 455 174 HOH TIP . H 5 HOH A 129 456 175 HOH TIP . H 5 HOH A 130 457 177 HOH TIP . H 5 HOH A 131 458 178 HOH HOH . H 5 HOH A 132 459 179 HOH HOH . H 5 HOH A 133 460 180 HOH HOH . H 5 HOH A 134 461 182 HOH HOH . H 5 HOH A 135 462 183 HOH HOH . H 5 HOH A 136 463 184 HOH HOH . H 5 HOH A 137 464 185 HOH HOH . H 5 HOH A 138 465 186 HOH HOH . H 5 HOH A 139 466 187 HOH HOH . H 5 HOH A 140 467 188 HOH HOH . H 5 HOH A 141 468 190 HOH HOH . H 5 HOH A 142 469 191 HOH HOH . H 5 HOH A 143 470 194 HOH HOH . H 5 HOH A 144 471 195 HOH HOH . H 5 HOH A 145 472 199 HOH HOH . H 5 HOH A 146 473 201 HOH HOH . H 5 HOH A 147 474 202 HOH HOH . H 5 HOH A 148 475 203 HOH HOH . H 5 HOH A 149 476 204 HOH HOH . H 5 HOH A 150 477 208 HOH HOH . H 5 HOH A 151 478 210 HOH HOH . H 5 HOH A 152 479 211 HOH HOH . H 5 HOH A 153 480 212 HOH HOH . H 5 HOH A 154 481 213 HOH HOH . H 5 HOH A 155 482 214 HOH HOH . H 5 HOH A 156 483 215 HOH HOH . H 5 HOH A 157 484 216 HOH HOH . H 5 HOH A 158 485 217 HOH HOH . H 5 HOH A 159 486 218 HOH HOH . H 5 HOH A 160 487 219 HOH HOH . H 5 HOH A 161 488 221 HOH HOH . H 5 HOH A 162 489 222 HOH HOH . H 5 HOH A 163 490 223 HOH HOH . H 5 HOH A 164 491 224 HOH HOH . H 5 HOH A 165 492 230 HOH HOH . H 5 HOH A 166 493 232 HOH HOH . H 5 HOH A 167 494 236 HOH HOH . H 5 HOH A 168 495 238 HOH HOH . H 5 HOH A 169 496 240 HOH HOH . H 5 HOH A 170 497 242 HOH HOH . H 5 HOH A 171 498 243 HOH HOH . H 5 HOH A 172 499 245 HOH HOH . H 5 HOH A 173 500 247 HOH HOH . H 5 HOH A 174 501 251 HOH HOH . H 5 HOH A 175 502 252 HOH HOH . H 5 HOH A 176 503 253 HOH HOH . H 5 HOH A 177 504 256 HOH HOH . H 5 HOH A 178 505 259 HOH HOH . H 5 HOH A 179 506 260 HOH HOH . H 5 HOH A 180 507 261 HOH HOH . H 5 HOH A 181 508 265 HOH HOH . H 5 HOH A 182 509 266 HOH HOH . H 5 HOH A 183 510 267 HOH HOH . H 5 HOH A 184 511 268 HOH HOH . H 5 HOH A 185 512 270 HOH HOH . H 5 HOH A 186 513 272 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x 6.97 _atom_site.Cartn_y 31.559 _atom_site.Cartn_z 40.002 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 95.77 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 302 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #