data_2NOZ # _model_server_result.job_id xGjUJxTHL3vU77o9QHCn7Q _model_server_result.datetime_utc '2024-11-04 20:37:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2noz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":302}' # _entry.id 2NOZ # _exptl.entry_id 2NOZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2NOZ _cell.length_a 92.391 _cell.length_b 92.391 _cell.length_c 210.713 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2NOZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B O3' DA 7 C DA 22 1_555 B P 8OG 8 C 8OG 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.601 ? covale ? covale2 B O3' 8OG 8 C 8OG 23 1_555 B P DG 9 C DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.616 ? metalc ? metalc1 B OP1 DC 11 C DC 26 1_555 E CA CA . C CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.928 ? metalc ? metalc2 B OP2 DC 11 C DC 26 1_555 E CA CA . C CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.077 ? metalc ? metalc3 E CA CA . C CA 302 1_555 C O CYS 239 A CYS 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.651 ? metalc ? metalc4 E CA CA . C CA 302 1_555 C O LEU 241 A LEU 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.999 ? metalc ? metalc5 E CA CA . C CA 302 1_555 C O VAL 244 A VAL 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.906 ? metalc ? metalc6 E CA CA . C CA 302 1_555 H O HOH . A HOH 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.142 ? hydrog WATSON-CRICK hydrog1 A N3 DT 3 B DT 3 1_555 B N1 DA 13 C DA 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A O4 DT 3 B DT 3 1_555 B N6 DA 13 C DA 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A N1 DA 4 B DA 4 1_555 B N3 DT 12 C DT 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N6 DA 4 B DA 4 1_555 B O4 DT 12 C DT 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N1 DG 5 B DG 5 1_555 B N3 DC 11 C DC 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A N2 DG 5 B DG 5 1_555 B O2 DC 11 C DC 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A O6 DG 5 B DG 5 1_555 B N4 DC 11 C DC 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N1 DA 6 B DA 6 1_555 B N3 DT 10 C DT 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N6 DA 6 B DA 6 1_555 B O4 DT 10 C DT 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N3 DC 7 B DC 7 1_555 B N1 DG 9 C DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N4 DC 7 B DC 7 1_555 B O6 DG 9 C DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A O2 DC 7 B DC 7 1_555 B N2 DG 9 C DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N3 DT 9 B DT 9 1_555 B N1 DA 7 C DA 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A O4 DT 9 B DT 9 1_555 B N6 DA 7 C DA 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N1 DG 10 B DG 10 1_555 B N3 DC 6 C DC 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A N2 DG 10 B DG 10 1_555 B O2 DC 6 C DC 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A O6 DG 10 B DG 10 1_555 B N4 DC 6 C DC 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A N1 DG 11 B DG 11 1_555 B N3 DC 5 C DC 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A N2 DG 11 B DG 11 1_555 B O2 DC 5 C DC 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A O6 DG 11 B DG 11 1_555 B N4 DC 5 C DC 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A N1 DA 12 B DA 12 1_555 B N3 DT 4 C DT 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N6 DA 12 B DA 12 1_555 B O4 DT 4 C DT 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A N3 DC 13 B DC 13 1_555 B N1 DG 3 C DG 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A N4 DC 13 B DC 13 1_555 B O6 DG 3 C DG 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 A O2 DC 13 B DC 13 1_555 B N2 DG 3 C DG 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2NOZ _atom_sites.fract_transf_matrix[1][1] 0.010824 _atom_sites.fract_transf_matrix[1][2] 0.006249 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012498 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004746 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CA C 1 301 301 CA CA . E 4 CA C 1 302 302 CA CA . F 5 HOH B 1 56 56 HOH TIP . F 5 HOH B 2 71 71 HOH TIP . F 5 HOH B 3 91 91 HOH HOH . F 5 HOH B 4 128 128 HOH HOH . G 5 HOH C 1 8 8 HOH TIP . G 5 HOH C 2 47 47 HOH TIP . G 5 HOH C 3 110 110 HOH HOH . G 5 HOH C 4 114 114 HOH HOH . G 5 HOH C 5 121 121 HOH HOH . G 5 HOH C 6 122 122 HOH HOH . H 5 HOH A 1 328 1 HOH TIP . H 5 HOH A 2 329 2 HOH TIP . H 5 HOH A 3 330 3 HOH TIP . H 5 HOH A 4 331 4 HOH TIP . H 5 HOH A 5 332 5 HOH TIP . H 5 HOH A 6 333 6 HOH TIP . H 5 HOH A 7 334 7 HOH TIP . H 5 HOH A 8 335 9 HOH TIP . H 5 HOH A 9 336 10 HOH TIP . H 5 HOH A 10 337 11 HOH TIP . H 5 HOH A 11 338 12 HOH TIP . H 5 HOH A 12 339 13 HOH TIP . H 5 HOH A 13 340 15 HOH TIP . H 5 HOH A 14 341 16 HOH TIP . H 5 HOH A 15 342 17 HOH TIP . H 5 HOH A 16 343 18 HOH TIP . H 5 HOH A 17 344 19 HOH TIP . H 5 HOH A 18 345 21 HOH TIP . H 5 HOH A 19 346 23 HOH TIP . H 5 HOH A 20 347 24 HOH TIP . H 5 HOH A 21 348 25 HOH TIP . H 5 HOH A 22 349 26 HOH TIP . H 5 HOH A 23 350 27 HOH TIP . H 5 HOH A 24 351 28 HOH TIP . H 5 HOH A 25 352 30 HOH TIP . H 5 HOH A 26 353 31 HOH TIP . H 5 HOH A 27 354 32 HOH TIP . H 5 HOH A 28 355 33 HOH TIP . H 5 HOH A 29 356 34 HOH TIP . H 5 HOH A 30 357 35 HOH TIP . H 5 HOH A 31 358 36 HOH TIP . H 5 HOH A 32 359 37 HOH TIP . H 5 HOH A 33 360 38 HOH TIP . H 5 HOH A 34 361 40 HOH TIP . H 5 HOH A 35 362 41 HOH TIP . H 5 HOH A 36 363 42 HOH TIP . H 5 HOH A 37 364 44 HOH TIP . H 5 HOH A 38 365 48 HOH TIP . H 5 HOH A 39 366 49 HOH TIP . H 5 HOH A 40 367 51 HOH TIP . H 5 HOH A 41 368 52 HOH TIP . H 5 HOH A 42 369 53 HOH TIP . H 5 HOH A 43 370 55 HOH TIP . H 5 HOH A 44 371 57 HOH TIP . H 5 HOH A 45 372 58 HOH TIP . H 5 HOH A 46 373 59 HOH TIP . H 5 HOH A 47 374 60 HOH TIP . H 5 HOH A 48 375 62 HOH TIP . H 5 HOH A 49 376 63 HOH TIP . H 5 HOH A 50 377 64 HOH TIP . H 5 HOH A 51 378 65 HOH TIP . H 5 HOH A 52 379 68 HOH TIP . H 5 HOH A 53 380 69 HOH TIP . H 5 HOH A 54 381 70 HOH TIP . H 5 HOH A 55 382 72 HOH TIP . H 5 HOH A 56 383 74 HOH TIP . H 5 HOH A 57 384 75 HOH HOH . H 5 HOH A 58 385 76 HOH HOH . H 5 HOH A 59 386 77 HOH HOH . H 5 HOH A 60 387 78 HOH HOH . H 5 HOH A 61 388 79 HOH HOH . H 5 HOH A 62 389 80 HOH HOH . H 5 HOH A 63 390 81 HOH HOH . H 5 HOH A 64 391 82 HOH HOH . H 5 HOH A 65 392 83 HOH HOH . H 5 HOH A 66 393 84 HOH HOH . H 5 HOH A 67 394 85 HOH HOH . H 5 HOH A 68 395 86 HOH HOH . H 5 HOH A 69 396 87 HOH HOH . H 5 HOH A 70 397 88 HOH HOH . H 5 HOH A 71 398 90 HOH HOH . H 5 HOH A 72 399 92 HOH HOH . H 5 HOH A 73 400 93 HOH HOH . H 5 HOH A 74 401 94 HOH HOH . H 5 HOH A 75 402 95 HOH HOH . H 5 HOH A 76 403 96 HOH HOH . H 5 HOH A 77 404 97 HOH HOH . H 5 HOH A 78 405 98 HOH HOH . H 5 HOH A 79 406 99 HOH HOH . H 5 HOH A 80 407 100 HOH HOH . H 5 HOH A 81 408 101 HOH HOH . H 5 HOH A 82 409 103 HOH HOH . H 5 HOH A 83 410 104 HOH HOH . H 5 HOH A 84 411 105 HOH HOH . H 5 HOH A 85 412 106 HOH HOH . H 5 HOH A 86 413 107 HOH HOH . H 5 HOH A 87 414 108 HOH HOH . H 5 HOH A 88 415 109 HOH HOH . H 5 HOH A 89 416 111 HOH HOH . H 5 HOH A 90 417 112 HOH HOH . H 5 HOH A 91 418 113 HOH HOH . H 5 HOH A 92 419 115 HOH HOH . H 5 HOH A 93 420 116 HOH HOH . H 5 HOH A 94 421 118 HOH HOH . H 5 HOH A 95 422 120 HOH HOH . H 5 HOH A 96 423 125 HOH HOH . H 5 HOH A 97 424 126 HOH HOH . H 5 HOH A 98 425 127 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x 7.043 _atom_site.Cartn_y 29.945 _atom_site.Cartn_z 40.784 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 67.29 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 302 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #