data_2NP1 # _model_server_result.job_id t-JfiH7Y3rpUoIhAO4164w _model_server_result.datetime_utc '2024-10-13 09:17:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2np1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":349}' # _entry.id 2NP1 # _exptl.entry_id 2NP1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 18.038 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'AMMONIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.46 _cell.angle_gamma 90 _cell.entry_id 2NP1 _cell.length_a 39.52 _cell.length_b 74.28 _cell.length_c 66.41 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2NP1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 2 A CYS 2 1_555 A SG CYS 122 A CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf2 A SG CYS 41 A CYS 41 1_555 A SG CYS 171 A CYS 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 B SG CYS 2 B CYS 2 1_555 B SG CYS 122 B CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? disulf ? disulf4 B SG CYS 41 B CYS 41 1_555 B SG CYS 171 B CYS 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc1 A NE2 HIS 59 A HIS 59 1_555 D FE HEM . A HEM 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc2 C N NH4 . A NH4 349 1_555 D FE HEM . A HEM 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.889 ? metalc ? metalc3 B NE2 HIS 59 B HIS 59 1_555 G FE HEM . B HEM 437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc4 F N NH4 . B NH4 436 1_555 G FE HEM . B HEM 437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? # _chem_comp.formula 'H4 N 1' _chem_comp.formula_weight 18.038 _chem_comp.id NH4 _chem_comp.mon_nstd_flag . _chem_comp.name 'AMMONIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2NP1 _atom_sites.fract_transf_matrix[1][1] 0.025304 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004216 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013463 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015266 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NH4 A 1 349 349 NH4 NH4 . D 3 HEM A 1 350 1 HEM HEM . E 4 2HP A 1 301 301 2HP 2HP . F 2 NH4 B 1 436 436 NH4 NH4 . G 3 HEM B 1 437 1 HEM HEM . H 4 2HP B 1 302 302 2HP 2HP . I 5 HOH A 1 351 303 HOH HOH . I 5 HOH A 2 352 304 HOH HOH . I 5 HOH A 3 353 305 HOH HOH . I 5 HOH A 4 354 306 HOH HOH . I 5 HOH A 5 355 307 HOH HOH . I 5 HOH A 6 356 308 HOH HOH . I 5 HOH A 7 357 309 HOH HOH . I 5 HOH A 8 358 310 HOH HOH . I 5 HOH A 9 359 311 HOH HOH . I 5 HOH A 10 360 312 HOH HOH . I 5 HOH A 11 361 313 HOH HOH . I 5 HOH A 12 362 314 HOH HOH . I 5 HOH A 13 363 315 HOH HOH . I 5 HOH A 14 364 316 HOH HOH . I 5 HOH A 15 365 317 HOH HOH . I 5 HOH A 16 366 318 HOH HOH . I 5 HOH A 17 367 319 HOH HOH . I 5 HOH A 18 368 320 HOH HOH . I 5 HOH A 19 369 321 HOH HOH . I 5 HOH A 20 370 322 HOH HOH . I 5 HOH A 21 371 323 HOH HOH . I 5 HOH A 22 372 324 HOH HOH . I 5 HOH A 23 373 325 HOH HOH . I 5 HOH A 24 374 326 HOH HOH . I 5 HOH A 25 375 327 HOH HOH . I 5 HOH A 26 376 328 HOH HOH . I 5 HOH A 27 377 329 HOH HOH . I 5 HOH A 28 378 331 HOH HOH . I 5 HOH A 29 379 332 HOH HOH . I 5 HOH A 30 380 333 HOH HOH . I 5 HOH A 31 381 334 HOH HOH . I 5 HOH A 32 382 335 HOH HOH . I 5 HOH A 33 383 336 HOH HOH . I 5 HOH A 34 384 337 HOH HOH . I 5 HOH A 35 385 338 HOH HOH . I 5 HOH A 36 386 339 HOH HOH . I 5 HOH A 37 387 340 HOH HOH . I 5 HOH A 38 388 341 HOH HOH . I 5 HOH A 39 389 342 HOH HOH . I 5 HOH A 40 390 343 HOH HOH . I 5 HOH A 41 391 344 HOH HOH . I 5 HOH A 42 392 345 HOH HOH . I 5 HOH A 43 393 346 HOH HOH . I 5 HOH A 44 394 347 HOH HOH . I 5 HOH A 45 395 348 HOH HOH . I 5 HOH A 46 396 350 HOH HOH . I 5 HOH A 47 397 351 HOH HOH . I 5 HOH A 48 398 352 HOH HOH . I 5 HOH A 49 399 353 HOH HOH . I 5 HOH A 50 400 354 HOH HOH . I 5 HOH A 51 401 357 HOH HOH . I 5 HOH A 52 402 358 HOH HOH . I 5 HOH A 53 403 359 HOH HOH . I 5 HOH A 54 404 360 HOH HOH . I 5 HOH A 55 405 361 HOH HOH . I 5 HOH A 56 406 362 HOH HOH . I 5 HOH A 57 407 363 HOH HOH . I 5 HOH A 58 408 364 HOH HOH . I 5 HOH A 59 409 365 HOH HOH . I 5 HOH A 60 410 428 HOH HOH . I 5 HOH A 61 411 429 HOH HOH . I 5 HOH A 62 412 430 HOH HOH . I 5 HOH A 63 413 431 HOH HOH . I 5 HOH A 64 414 432 HOH HOH . I 5 HOH A 65 415 433 HOH HOH . I 5 HOH A 66 416 434 HOH HOH . I 5 HOH A 67 417 435 HOH HOH . I 5 HOH A 68 418 437 HOH HOH . I 5 HOH A 69 419 438 HOH HOH . I 5 HOH A 70 420 439 HOH HOH . J 5 HOH B 1 330 330 HOH HOH . J 5 HOH B 2 355 355 HOH HOH . J 5 HOH B 3 356 356 HOH HOH . J 5 HOH B 4 366 366 HOH HOH . J 5 HOH B 5 367 367 HOH HOH . J 5 HOH B 6 368 368 HOH HOH . J 5 HOH B 7 369 369 HOH HOH . J 5 HOH B 8 370 370 HOH HOH . J 5 HOH B 9 371 371 HOH HOH . J 5 HOH B 10 372 372 HOH HOH . J 5 HOH B 11 373 373 HOH HOH . J 5 HOH B 12 374 374 HOH HOH . J 5 HOH B 13 375 375 HOH HOH . J 5 HOH B 14 376 376 HOH HOH . J 5 HOH B 15 377 377 HOH HOH . J 5 HOH B 16 378 378 HOH HOH . J 5 HOH B 17 379 379 HOH HOH . J 5 HOH B 18 380 380 HOH HOH . J 5 HOH B 19 381 381 HOH HOH . J 5 HOH B 20 382 382 HOH HOH . J 5 HOH B 21 383 383 HOH HOH . J 5 HOH B 22 384 384 HOH HOH . J 5 HOH B 23 385 385 HOH HOH . J 5 HOH B 24 386 386 HOH HOH . J 5 HOH B 25 387 387 HOH HOH . J 5 HOH B 26 388 388 HOH HOH . J 5 HOH B 27 389 389 HOH HOH . J 5 HOH B 28 390 390 HOH HOH . J 5 HOH B 29 391 391 HOH HOH . J 5 HOH B 30 392 392 HOH HOH . J 5 HOH B 31 393 393 HOH HOH . J 5 HOH B 32 394 394 HOH HOH . J 5 HOH B 33 395 395 HOH HOH . J 5 HOH B 34 396 396 HOH HOH . J 5 HOH B 35 397 397 HOH HOH . J 5 HOH B 36 398 398 HOH HOH . J 5 HOH B 37 399 399 HOH HOH . J 5 HOH B 38 400 400 HOH HOH . J 5 HOH B 39 401 401 HOH HOH . J 5 HOH B 40 402 402 HOH HOH . J 5 HOH B 41 403 403 HOH HOH . J 5 HOH B 42 404 404 HOH HOH . J 5 HOH B 43 405 405 HOH HOH . J 5 HOH B 44 406 406 HOH HOH . J 5 HOH B 45 407 407 HOH HOH . J 5 HOH B 46 408 408 HOH HOH . J 5 HOH B 47 409 409 HOH HOH . J 5 HOH B 48 410 410 HOH HOH . J 5 HOH B 49 411 411 HOH HOH . J 5 HOH B 50 412 412 HOH HOH . J 5 HOH B 51 413 413 HOH HOH . J 5 HOH B 52 414 414 HOH HOH . J 5 HOH B 53 415 415 HOH HOH . J 5 HOH B 54 416 416 HOH HOH . J 5 HOH B 55 417 417 HOH HOH . J 5 HOH B 56 418 418 HOH HOH . J 5 HOH B 57 419 419 HOH HOH . J 5 HOH B 58 420 420 HOH HOH . J 5 HOH B 59 421 421 HOH HOH . J 5 HOH B 60 422 422 HOH HOH . J 5 HOH B 61 423 423 HOH HOH . J 5 HOH B 62 424 424 HOH HOH . J 5 HOH B 63 425 425 HOH HOH . J 5 HOH B 64 426 426 HOH HOH . J 5 HOH B 65 427 427 HOH HOH . J 5 HOH B 66 440 440 HOH HOH . J 5 HOH B 67 441 441 HOH HOH . J 5 HOH B 68 442 442 HOH HOH . J 5 HOH B 69 443 443 HOH HOH . J 5 HOH B 70 444 444 HOH HOH . J 5 HOH B 71 445 445 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol N _atom_site.label_atom_id N _atom_site.label_comp_id NH4 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 24.778 _atom_site.Cartn_y 28.046 _atom_site.Cartn_z 62.236 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 54.63 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id N _atom_site.auth_comp_id NH4 _atom_site.auth_seq_id 349 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #