data_2NPN
#
_model_server_result.job_id            RfvF4Yg_3zuGicWRvrWZxA 
_model_server_result.datetime_utc      '2024-12-21 16:23:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2npn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":251}' 
#
_entry.id    2NPN 
#
_exptl.entry_id    2NPN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2NPN 
_cell.length_a            77.104 
_cell.length_b            80.845 
_cell.length_c            76.976 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2NPN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA,PQS dimeric 2 software_defined_assembly 2 
PISA dimeric 2 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E 1 1 
A,B,C,D,E 2 1,2 
A,B,C,D,E 3 1,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_566 x,-y+1,-z+1 1 0 0 0 -1 0 0 0 -1 0 80.845 76.976 
3 'crystal symmetry operation' 3_756 -x+2,y,-z+3/2 -1 0 0 0 1 0 0 0 -1 154.208 0 115.464 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ALA 1 A ALA 0 1_555 A N MSE 2 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale2 A C MSE 2 A MSE 1 1_555 A N ARG 3 A ARG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale3 A C HIS 125 A HIS 124 1_555 A N MSE 126 A MSE 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale4 A C MSE 126 A MSE 125 1_555 A N ARG 127 A ARG 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale5 A C VAL 184 A VAL 183 1_555 A N MSE 185 A MSE 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? 
covale ? covale6 A C MSE 185 A MSE 184 1_555 A N LEU 186 A LEU 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale7 A C TYR 201 A TYR 200 1_555 A N MSE 202 A MSE 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale8 A C MSE 202 A MSE 201 1_555 A N TRP 203 A TRP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? 
covale ? covale9 A C ILE 241 A ILE 240 1_555 A N MSE 242 A MSE 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale10 A C MSE 242 A MSE 241 1_555 A N ASP 243 A ASP 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
metalc ? metalc1 A OH TYR 219 A TYR 218 1_555 B MG MG . A MG 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? 
metalc ? metalc2 A OH TYR 219 A TYR 218 3_756 B MG MG . A MG 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? 
metalc ? metalc3 A O LEU 250 A LEU 249 1_555 B MG MG . A MG 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? 
metalc ? metalc4 A O LEU 250 A LEU 249 3_756 B MG MG . A MG 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2NPN 
_atom_sites.fract_transf_matrix[1][1]    0.012969 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012369 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012991 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 251 1 MG MG . 
C 3 SAM A 1 4633 4633 SAM SAM . 
D 4 GOL A 1 1001 1001 GOL GOL . 
E 5 HOH A 1 4634 2 HOH HOH . 
E 5 HOH A 2 4635 3 HOH HOH . 
E 5 HOH A 3 4636 4 HOH HOH . 
E 5 HOH A 4 4637 5 HOH HOH . 
E 5 HOH A 5 4638 6 HOH HOH . 
E 5 HOH A 6 4639 7 HOH HOH . 
E 5 HOH A 7 4640 8 HOH HOH . 
E 5 HOH A 8 4641 9 HOH HOH . 
E 5 HOH A 9 4642 10 HOH HOH . 
E 5 HOH A 10 4643 11 HOH HOH . 
E 5 HOH A 11 4644 12 HOH HOH . 
E 5 HOH A 12 4645 13 HOH HOH . 
E 5 HOH A 13 4646 14 HOH HOH . 
E 5 HOH A 14 4647 15 HOH HOH . 
E 5 HOH A 15 4648 16 HOH HOH . 
E 5 HOH A 16 4649 17 HOH HOH . 
E 5 HOH A 17 4650 18 HOH HOH . 
E 5 HOH A 18 4651 19 HOH HOH . 
E 5 HOH A 19 4652 20 HOH HOH . 
E 5 HOH A 20 4653 21 HOH HOH . 
E 5 HOH A 21 4654 22 HOH HOH . 
E 5 HOH A 22 4655 23 HOH HOH . 
E 5 HOH A 23 4656 24 HOH HOH . 
E 5 HOH A 24 4657 25 HOH HOH . 
E 5 HOH A 25 4658 26 HOH HOH . 
E 5 HOH A 26 4659 27 HOH HOH . 
E 5 HOH A 27 4660 28 HOH HOH . 
E 5 HOH A 28 4661 29 HOH HOH . 
E 5 HOH A 29 4662 30 HOH HOH . 
E 5 HOH A 30 4663 31 HOH HOH . 
E 5 HOH A 31 4664 32 HOH HOH . 
E 5 HOH A 32 4665 33 HOH HOH . 
E 5 HOH A 33 4666 34 HOH HOH . 
E 5 HOH A 34 4667 35 HOH HOH . 
E 5 HOH A 35 4668 36 HOH HOH . 
E 5 HOH A 36 4669 37 HOH HOH . 
E 5 HOH A 37 4670 38 HOH HOH . 
E 5 HOH A 38 4671 39 HOH HOH . 
E 5 HOH A 39 4672 40 HOH HOH . 
E 5 HOH A 40 4673 41 HOH HOH . 
E 5 HOH A 41 4674 42 HOH HOH . 
E 5 HOH A 42 4675 44 HOH HOH . 
E 5 HOH A 43 4676 45 HOH HOH . 
E 5 HOH A 44 4677 46 HOH HOH . 
E 5 HOH A 45 4678 47 HOH HOH . 
E 5 HOH A 46 4679 48 HOH HOH . 
E 5 HOH A 47 4680 49 HOH HOH . 
E 5 HOH A 48 4681 50 HOH HOH . 
E 5 HOH A 49 4682 51 HOH HOH . 
E 5 HOH A 50 4683 52 HOH HOH . 
E 5 HOH A 51 4684 53 HOH HOH . 
E 5 HOH A 52 4685 54 HOH HOH . 
E 5 HOH A 53 4686 55 HOH HOH . 
E 5 HOH A 54 4687 56 HOH HOH . 
E 5 HOH A 55 4688 57 HOH HOH . 
E 5 HOH A 56 4689 59 HOH HOH . 
E 5 HOH A 57 4690 60 HOH HOH . 
E 5 HOH A 58 4691 61 HOH HOH . 
E 5 HOH A 59 4692 62 HOH HOH . 
E 5 HOH A 60 4693 63 HOH HOH . 
E 5 HOH A 61 4694 64 HOH HOH . 
E 5 HOH A 62 4695 65 HOH HOH . 
E 5 HOH A 63 4696 66 HOH HOH . 
E 5 HOH A 64 4697 67 HOH HOH . 
E 5 HOH A 65 4698 69 HOH HOH . 
E 5 HOH A 66 4699 70 HOH HOH . 
E 5 HOH A 67 4700 71 HOH HOH . 
E 5 HOH A 68 4701 73 HOH HOH . 
E 5 HOH A 69 4702 75 HOH HOH . 
E 5 HOH A 70 4703 76 HOH HOH . 
E 5 HOH A 71 4704 77 HOH HOH . 
E 5 HOH A 72 4705 78 HOH HOH . 
E 5 HOH A 73 4706 79 HOH HOH . 
E 5 HOH A 74 4707 81 HOH HOH . 
E 5 HOH A 75 4708 82 HOH HOH . 
E 5 HOH A 76 4709 85 HOH HOH . 
E 5 HOH A 77 4710 86 HOH HOH . 
E 5 HOH A 78 4711 87 HOH HOH . 
E 5 HOH A 79 4712 88 HOH HOH . 
E 5 HOH A 80 4713 89 HOH HOH . 
E 5 HOH A 81 4714 91 HOH HOH . 
E 5 HOH A 82 4715 92 HOH HOH . 
E 5 HOH A 83 4716 93 HOH HOH . 
E 5 HOH A 84 4717 94 HOH HOH . 
E 5 HOH A 85 4718 95 HOH HOH . 
E 5 HOH A 86 4719 96 HOH HOH . 
E 5 HOH A 87 4720 98 HOH HOH . 
E 5 HOH A 88 4721 99 HOH HOH . 
E 5 HOH A 89 4722 101 HOH HOH . 
E 5 HOH A 90 4723 102 HOH HOH . 
E 5 HOH A 91 4724 103 HOH HOH . 
E 5 HOH A 92 4725 105 HOH HOH . 
E 5 HOH A 93 4726 107 HOH HOH . 
E 5 HOH A 94 4727 108 HOH HOH . 
E 5 HOH A 95 4728 109 HOH HOH . 
E 5 HOH A 96 4729 110 HOH HOH . 
E 5 HOH A 97 4730 111 HOH HOH . 
E 5 HOH A 98 4731 112 HOH HOH . 
E 5 HOH A 99 4732 114 HOH HOH . 
E 5 HOH A 100 4733 115 HOH HOH . 
E 5 HOH A 101 4734 116 HOH HOH . 
E 5 HOH A 102 4735 117 HOH HOH . 
E 5 HOH A 103 4736 118 HOH HOH . 
E 5 HOH A 104 4737 121 HOH HOH . 
E 5 HOH A 105 4738 122 HOH HOH . 
E 5 HOH A 106 4739 123 HOH HOH . 
E 5 HOH A 107 4740 124 HOH HOH . 
E 5 HOH A 108 4741 125 HOH HOH . 
E 5 HOH A 109 4742 126 HOH HOH . 
E 5 HOH A 110 4743 128 HOH HOH . 
E 5 HOH A 111 4744 129 HOH HOH . 
E 5 HOH A 112 4745 130 HOH HOH . 
E 5 HOH A 113 4746 131 HOH HOH . 
E 5 HOH A 114 4747 133 HOH HOH . 
E 5 HOH A 115 4748 134 HOH HOH . 
E 5 HOH A 116 4749 135 HOH HOH . 
E 5 HOH A 117 4750 136 HOH HOH . 
E 5 HOH A 118 4751 137 HOH HOH . 
E 5 HOH A 119 4752 138 HOH HOH . 
E 5 HOH A 120 4753 139 HOH HOH . 
E 5 HOH A 121 4754 140 HOH HOH . 
E 5 HOH A 122 4755 141 HOH HOH . 
E 5 HOH A 123 4756 143 HOH HOH . 
E 5 HOH A 124 4757 144 HOH HOH . 
E 5 HOH A 125 4758 145 HOH HOH . 
E 5 HOH A 126 4759 148 HOH HOH . 
E 5 HOH A 127 4760 149 HOH HOH . 
E 5 HOH A 128 4761 150 HOH HOH . 
E 5 HOH A 129 4762 151 HOH HOH . 
E 5 HOH A 130 4763 153 HOH HOH . 
E 5 HOH A 131 4764 154 HOH HOH . 
E 5 HOH A 132 4765 157 HOH HOH . 
E 5 HOH A 133 4766 158 HOH HOH . 
E 5 HOH A 134 4767 161 HOH HOH . 
E 5 HOH A 135 4768 164 HOH HOH . 
E 5 HOH A 136 4769 165 HOH HOH . 
E 5 HOH A 137 4770 166 HOH HOH . 
E 5 HOH A 138 4771 168 HOH HOH . 
E 5 HOH A 139 4772 171 HOH HOH . 
E 5 HOH A 140 4773 173 HOH HOH . 
E 5 HOH A 141 4774 177 HOH HOH . 
E 5 HOH A 142 4775 178 HOH HOH . 
E 5 HOH A 143 4776 180 HOH HOH . 
E 5 HOH A 144 4777 181 HOH HOH . 
E 5 HOH A 145 4778 182 HOH HOH . 
E 5 HOH A 146 4779 183 HOH HOH . 
E 5 HOH A 147 4780 184 HOH HOH . 
E 5 HOH A 148 4781 185 HOH HOH . 
E 5 HOH A 149 4782 186 HOH HOH . 
E 5 HOH A 150 4783 188 HOH HOH . 
E 5 HOH A 151 4784 189 HOH HOH . 
E 5 HOH A 152 4785 193 HOH HOH . 
E 5 HOH A 153 4786 195 HOH HOH . 
E 5 HOH A 154 4787 199 HOH HOH . 
E 5 HOH A 155 4788 201 HOH HOH . 
E 5 HOH A 156 4789 202 HOH HOH . 
E 5 HOH A 157 4790 203 HOH HOH . 
E 5 HOH A 158 4791 204 HOH HOH . 
E 5 HOH A 159 4792 205 HOH HOH . 
E 5 HOH A 160 4793 206 HOH HOH . 
E 5 HOH A 161 4794 207 HOH HOH . 
E 5 HOH A 162 4795 208 HOH HOH . 
E 5 HOH A 163 4796 209 HOH HOH . 
E 5 HOH A 164 4797 210 HOH HOH . 
E 5 HOH A 165 4798 211 HOH HOH . 
E 5 HOH A 166 4799 212 HOH HOH . 
E 5 HOH A 167 4800 213 HOH HOH . 
E 5 HOH A 168 4801 214 HOH HOH . 
E 5 HOH A 169 4802 215 HOH HOH . 
E 5 HOH A 170 4803 216 HOH HOH . 
E 5 HOH A 171 4804 217 HOH HOH . 
E 5 HOH A 172 4805 218 HOH HOH . 
E 5 HOH A 173 4806 219 HOH HOH . 
E 5 HOH A 174 4807 220 HOH HOH . 
E 5 HOH A 175 4808 221 HOH HOH . 
E 5 HOH A 176 4809 223 HOH HOH . 
E 5 HOH A 177 4810 224 HOH HOH . 
E 5 HOH A 178 4811 225 HOH HOH . 
E 5 HOH A 179 4812 226 HOH HOH . 
E 5 HOH A 180 4813 227 HOH HOH . 
E 5 HOH A 181 4814 228 HOH HOH . 
E 5 HOH A 182 4815 229 HOH HOH . 
E 5 HOH A 183 4816 231 HOH HOH . 
E 5 HOH A 184 4817 232 HOH HOH . 
E 5 HOH A 185 4818 233 HOH HOH . 
E 5 HOH A 186 4819 234 HOH HOH . 
E 5 HOH A 187 4820 235 HOH HOH . 
E 5 HOH A 188 4821 237 HOH HOH . 
E 5 HOH A 189 4822 238 HOH HOH . 
E 5 HOH A 190 4823 239 HOH HOH . 
E 5 HOH A 191 4824 240 HOH HOH . 
E 5 HOH A 192 4825 241 HOH HOH . 
E 5 HOH A 193 4826 242 HOH HOH . 
E 5 HOH A 194 4827 243 HOH HOH . 
E 5 HOH A 195 4828 245 HOH HOH . 
E 5 HOH A 196 4829 246 HOH HOH . 
E 5 HOH A 197 4830 247 HOH HOH . 
E 5 HOH A 198 4831 248 HOH HOH . 
E 5 HOH A 199 4832 249 HOH HOH . 
E 5 HOH A 200 4833 250 HOH HOH . 
E 5 HOH A 201 4834 251 HOH HOH . 
E 5 HOH A 202 4835 252 HOH HOH . 
E 5 HOH A 203 4836 253 HOH HOH . 
E 5 HOH A 204 4837 254 HOH HOH . 
E 5 HOH A 205 4838 255 HOH HOH . 
E 5 HOH A 206 4839 256 HOH HOH . 
E 5 HOH A 207 4840 257 HOH HOH . 
E 5 HOH A 208 4841 258 HOH HOH . 
E 5 HOH A 209 4842 259 HOH HOH . 
E 5 HOH A 210 4843 260 HOH HOH . 
E 5 HOH A 211 4844 261 HOH HOH . 
E 5 HOH A 212 4845 262 HOH HOH . 
E 5 HOH A 213 4846 263 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               77.059 
_atom_site.Cartn_y               31.578 
_atom_site.Cartn_z               57.754 
_atom_site.occupancy             0.5 
_atom_site.B_iso_or_equiv        17.25 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           251 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           1 
#