data_2NRL
#
_model_server_result.job_id            urdm64cLDvGQ8RIqticaiQ 
_model_server_result.datetime_utc      '2025-02-22 17:38:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2nrl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":303}' 
#
_entry.id    2NRL 
#
_exptl.entry_id    2NRL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.96 
_cell.angle_gamma         90 
_cell.entry_id            2NRL 
_cell.length_a            33.985 
_cell.length_b            51.976 
_cell.length_c            38.781 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2NRL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ACE 1 A ACE 1 1_555 A N ALA 2 A ALA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
metalc ? metalc1 A NE2 HIS 89 A HIS 89 1_555 B FE HEM . A HEM 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
metalc ? metalc2 B FE HEM . A HEM 148 1_555 F O HOH . A HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 89 n n 
C1 C2 EDO sing 90 n n 
C1 H11 EDO sing 91 n n 
C1 H12 EDO sing 92 n n 
O1 HO1 EDO sing 93 n n 
C2 O2 EDO sing 94 n n 
C2 H21 EDO sing 95 n n 
C2 H22 EDO sing 96 n n 
O2 HO2 EDO sing 97 n n 
#
_atom_sites.entry_id                     2NRL 
_atom_sites.fract_transf_matrix[1][1]    0.029425 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.007316 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01924 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026571 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 148 148 HEM HEM . 
C 3 EDO A 1 301 1 EDO EDO . 
D 3 EDO A 1 302 2 EDO EDO . 
E 3 EDO A 1 303 3 EDO EDO . 
F 4 HOH A 1 304 1 HOH HOH . 
F 4 HOH A 2 305 2 HOH HOH . 
F 4 HOH A 3 306 3 HOH HOH . 
F 4 HOH A 4 307 5 HOH HOH . 
F 4 HOH A 5 308 6 HOH HOH . 
F 4 HOH A 6 309 7 HOH HOH . 
F 4 HOH A 7 310 8 HOH HOH . 
F 4 HOH A 8 311 9 HOH HOH . 
F 4 HOH A 9 312 10 HOH HOH . 
F 4 HOH A 10 313 11 HOH HOH . 
F 4 HOH A 11 314 12 HOH HOH . 
F 4 HOH A 12 315 13 HOH HOH . 
F 4 HOH A 13 316 14 HOH HOH . 
F 4 HOH A 14 317 16 HOH HOH . 
F 4 HOH A 15 318 17 HOH HOH . 
F 4 HOH A 16 319 18 HOH HOH . 
F 4 HOH A 17 320 19 HOH HOH . 
F 4 HOH A 18 321 20 HOH HOH . 
F 4 HOH A 19 322 21 HOH HOH . 
F 4 HOH A 20 323 22 HOH HOH . 
F 4 HOH A 21 324 23 HOH HOH . 
F 4 HOH A 22 325 24 HOH HOH . 
F 4 HOH A 23 326 25 HOH HOH . 
F 4 HOH A 24 327 26 HOH HOH . 
F 4 HOH A 25 328 27 HOH HOH . 
F 4 HOH A 26 329 30 HOH HOH . 
F 4 HOH A 27 330 31 HOH HOH . 
F 4 HOH A 28 331 32 HOH HOH . 
F 4 HOH A 29 332 34 HOH HOH . 
F 4 HOH A 30 333 35 HOH HOH . 
F 4 HOH A 31 334 36 HOH HOH . 
F 4 HOH A 32 335 37 HOH HOH . 
F 4 HOH A 33 336 38 HOH HOH . 
F 4 HOH A 34 337 39 HOH HOH . 
F 4 HOH A 35 338 40 HOH HOH . 
F 4 HOH A 36 339 41 HOH HOH . 
F 4 HOH A 37 340 42 HOH HOH . 
F 4 HOH A 38 341 43 HOH HOH . 
F 4 HOH A 39 342 45 HOH HOH . 
F 4 HOH A 40 343 46 HOH HOH . 
F 4 HOH A 41 344 47 HOH HOH . 
F 4 HOH A 42 345 48 HOH HOH . 
F 4 HOH A 43 346 49 HOH HOH . 
F 4 HOH A 44 347 50 HOH HOH . 
F 4 HOH A 45 348 52 HOH HOH . 
F 4 HOH A 46 349 54 HOH HOH . 
F 4 HOH A 47 350 55 HOH HOH . 
F 4 HOH A 48 351 56 HOH HOH . 
F 4 HOH A 49 352 57 HOH HOH . 
F 4 HOH A 50 353 60 HOH HOH . 
F 4 HOH A 51 354 61 HOH HOH . 
F 4 HOH A 52 355 64 HOH HOH . 
F 4 HOH A 53 356 65 HOH HOH . 
F 4 HOH A 54 357 67 HOH HOH . 
F 4 HOH A 55 358 68 HOH HOH . 
F 4 HOH A 56 359 69 HOH HOH . 
F 4 HOH A 57 360 70 HOH HOH . 
F 4 HOH A 58 361 71 HOH HOH . 
F 4 HOH A 59 362 72 HOH HOH . 
F 4 HOH A 60 363 74 HOH HOH . 
F 4 HOH A 61 364 77 HOH HOH . 
F 4 HOH A 62 365 89 HOH HOH . 
F 4 HOH A 63 366 90 HOH HOH . 
F 4 HOH A 64 367 93 HOH HOH . 
F 4 HOH A 65 368 97 HOH HOH . 
F 4 HOH A 66 369 98 HOH HOH . 
F 4 HOH A 67 370 105 HOH HOH . 
F 4 HOH A 68 371 111 HOH HOH . 
F 4 HOH A 69 372 113 HOH HOH . 
F 4 HOH A 70 373 114 HOH HOH . 
F 4 HOH A 71 374 119 HOH HOH . 
F 4 HOH A 72 375 123 HOH HOH . 
F 4 HOH A 73 376 124 HOH HOH . 
F 4 HOH A 74 377 125 HOH HOH . 
F 4 HOH A 75 378 126 HOH HOH . 
F 4 HOH A 76 379 127 HOH HOH . 
F 4 HOH A 77 380 128 HOH HOH . 
F 4 HOH A 78 381 129 HOH HOH . 
F 4 HOH A 79 382 130 HOH HOH . 
F 4 HOH A 80 383 131 HOH HOH . 
F 4 HOH A 81 384 132 HOH HOH . 
F 4 HOH A 82 385 133 HOH HOH . 
F 4 HOH A 83 386 134 HOH HOH . 
F 4 HOH A 84 387 135 HOH HOH . 
F 4 HOH A 85 388 136 HOH HOH . 
F 4 HOH A 86 389 137 HOH HOH . 
F 4 HOH A 87 390 138 HOH HOH . 
F 4 HOH A 88 391 139 HOH HOH . 
F 4 HOH A 89 392 140 HOH HOH . 
F 4 HOH A 90 393 141 HOH HOH . 
F 4 HOH A 91 394 142 HOH HOH . 
F 4 HOH A 92 395 143 HOH HOH . 
F 4 HOH A 93 396 144 HOH HOH . 
F 4 HOH A 94 397 145 HOH HOH . 
F 4 HOH A 95 398 146 HOH HOH . 
F 4 HOH A 96 399 147 HOH HOH . 
F 4 HOH A 97 400 148 HOH HOH . 
F 4 HOH A 98 401 149 HOH HOH . 
F 4 HOH A 99 402 150 HOH HOH . 
F 4 HOH A 100 403 151 HOH HOH . 
F 4 HOH A 101 404 152 HOH HOH . 
F 4 HOH A 102 405 153 HOH HOH . 
F 4 HOH A 103 406 154 HOH HOH . 
F 4 HOH A 104 407 155 HOH HOH . 
F 4 HOH A 105 408 156 HOH HOH . 
F 4 HOH A 106 409 157 HOH HOH . 
F 4 HOH A 107 410 158 HOH HOH . 
F 4 HOH A 108 411 159 HOH HOH . 
F 4 HOH A 109 412 160 HOH HOH . 
F 4 HOH A 110 413 161 HOH HOH . 
F 4 HOH A 111 414 162 HOH HOH . 
F 4 HOH A 112 415 163 HOH HOH . 
F 4 HOH A 113 416 164 HOH HOH . 
F 4 HOH A 114 417 165 HOH HOH . 
F 4 HOH A 115 418 166 HOH HOH . 
F 4 HOH A 116 419 167 HOH HOH . 
F 4 HOH A 117 420 168 HOH HOH . 
F 4 HOH A 118 421 169 HOH HOH . 
F 4 HOH A 119 422 170 HOH HOH . 
F 4 HOH A 120 423 171 HOH HOH . 
F 4 HOH A 121 424 172 HOH HOH . 
F 4 HOH A 122 425 173 HOH HOH . 
F 4 HOH A 123 426 174 HOH HOH . 
F 4 HOH A 124 427 175 HOH HOH . 
F 4 HOH A 125 428 176 HOH HOH . 
F 4 HOH A 126 429 177 HOH HOH . 
F 4 HOH A 127 430 178 HOH HOH . 
F 4 HOH A 128 431 179 HOH HOH . 
F 4 HOH A 129 432 180 HOH HOH . 
F 4 HOH A 130 433 181 HOH HOH . 
F 4 HOH A 131 434 182 HOH HOH . 
F 4 HOH A 132 435 183 HOH HOH . 
F 4 HOH A 133 436 184 HOH HOH . 
F 4 HOH A 134 437 185 HOH HOH . 
F 4 HOH A 135 438 186 HOH HOH . 
F 4 HOH A 136 439 187 HOH HOH . 
F 4 HOH A 137 440 188 HOH HOH . 
F 4 HOH A 138 441 189 HOH HOH . 
F 4 HOH A 139 442 190 HOH HOH . 
F 4 HOH A 140 443 191 HOH HOH . 
F 4 HOH A 141 444 192 HOH HOH . 
F 4 HOH A 142 445 193 HOH HOH . 
F 4 HOH A 143 446 194 HOH HOH . 
F 4 HOH A 144 447 195 HOH HOH . 
F 4 HOH A 145 448 196 HOH HOH . 
F 4 HOH A 146 449 197 HOH HOH . 
F 4 HOH A 147 450 198 HOH HOH . 
F 4 HOH A 148 451 199 HOH HOH . 
F 4 HOH A 149 452 200 HOH HOH . 
F 4 HOH A 150 453 201 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . E 3 -1.973 -11.711 1.068 0.5 14.94 ? C1 EDO 303 A 1 
HETATM 2 O O1 EDO . . . E 3 -1.653 -10.33 0.866 0.5 15.43 ? O1 EDO 303 A 1 
HETATM 3 C C2 EDO . . . E 3 -3.189 -12.082 0.255 0.5 18.28 ? C2 EDO 303 A 1 
HETATM 4 O O2 EDO . . . E 3 -2.807 -11.995 -1.121 0.5 20.66 ? O2 EDO 303 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
#