data_2NSI # _model_server_result.job_id JXqC5KzqyqsqFnB9OX4u8Q _model_server_result.datetime_utc '2024-11-14 10:04:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2nsi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":800}' # _entry.id 2NSI # _exptl.entry_id 2NSI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 104.174 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ETHYLISOTHIOUREA _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2NSI _cell.length_a 188.37 _cell.length_b 188.37 _cell.length_c 230.16 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2NSI _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,K,L,M,N,O 1 1 C,D,P,Q,R,S,T,U,V,W,X,Y 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 J N N ? 5 O N N ? 5 T N N ? 5 Y N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 42 A CYS 115 1_555 B SG CYS 42 B CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? disulf ? disulf2 C SG CYS 42 C CYS 115 1_555 D SG CYS 42 D CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc1 A SG CYS 127 A CYS 200 1_555 H FE HEM . A HEM 550 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc2 B SG CYS 127 B CYS 200 1_555 M FE HEM . B HEM 550 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc3 C SG CYS 127 C CYS 200 1_555 R FE HEM . C HEM 550 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc4 D SG CYS 127 D CYS 200 1_555 W FE HEM . D HEM 550 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? # _chem_comp.formula 'C3 H8 N2 S' _chem_comp.formula_weight 104.174 _chem_comp.id ITU _chem_comp.mon_nstd_flag . _chem_comp.name ETHYLISOTHIOUREA _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 ITU sing 286 n n C1 H11 ITU sing 287 n n C1 H12 ITU sing 288 n n C1 H13 ITU sing 289 n n C2 S ITU sing 290 n n C2 H21 ITU sing 291 n n C2 H22 ITU sing 292 n n S C3 ITU sing 293 n n C3 N1 ITU sing 294 n n C3 N2 ITU doub 295 n n N1 HN11 ITU sing 296 n n N1 HN12 ITU sing 297 n n N2 HN2 ITU sing 298 n n # _atom_sites.entry_id 2NSI _atom_sites.fract_transf_matrix[1][1] 0.005309 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005309 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004345 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 SO4 A 1 910 910 SO4 SO4 . F 2 SO4 A 1 920 920 SO4 SO4 . G 2 SO4 A 1 930 930 SO4 SO4 . H 3 HEM A 1 550 550 HEM HEM . I 4 H4B A 1 600 600 H4B BH4 . J 5 ITU A 1 800 800 ITU ITU . K 2 SO4 B 1 911 910 SO4 SO4 . L 2 SO4 B 1 921 920 SO4 SO4 . M 3 HEM B 1 550 550 HEM HEM . N 4 H4B B 1 601 600 H4B BH4 . O 5 ITU B 1 801 800 ITU ITU . P 2 SO4 C 1 912 910 SO4 SO4 . Q 2 SO4 C 1 922 920 SO4 SO4 . R 3 HEM C 1 550 550 HEM HEM . S 4 H4B C 1 602 600 H4B BH4 . T 5 ITU C 1 802 800 ITU ITU . U 2 SO4 D 1 913 910 SO4 SO4 . V 2 SO4 D 1 923 920 SO4 SO4 . W 3 HEM D 1 550 550 HEM HEM . X 4 H4B D 1 603 600 H4B BH4 . Y 5 ITU D 1 803 800 ITU ITU . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 ITU . . . J 5 9.346 60.496 14.875 1 61.33 ? C1 ITU 800 A 1 HETATM 2 C C2 ITU . . . J 5 8.21 61.393 14.525 1 56.59 ? C2 ITU 800 A 1 HETATM 3 S S ITU . . . J 5 7.33 61.864 15.991 1 54.93 ? S ITU 800 A 1 HETATM 4 C C3 ITU . . . J 5 7.859 63.454 16.494 1 47.83 ? C3 ITU 800 A 1 HETATM 5 N N1 ITU . . . J 5 7.015 64.468 16.459 1 51.09 ? N1 ITU 800 A 1 HETATM 6 N N2 ITU . . . J 5 9.099 63.627 16.914 1 51.11 ? N2 ITU 800 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 138 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #