data_2NTA # _model_server_result.job_id JQzqXxDiI-tQWreO3p0Vjg _model_server_result.datetime_utc '2024-10-12 19:21:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2nta # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 2NTA # _exptl.entry_id 2NTA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 328.794 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-(4-CHLORO-5-PHENYL-3-THIENYL)-1,2,5-THIADIAZOLIDIN-3-ONE 1,1-DIOXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2NTA _cell.length_a 88.256 _cell.length_b 88.256 _cell.length_c 104.17 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2NTA _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H9 Cl N2 O3 S2' _chem_comp.formula_weight 328.794 _chem_comp.id 521 _chem_comp.mon_nstd_flag . _chem_comp.name '5-(4-CHLORO-5-PHENYL-3-THIENYL)-1,2,5-THIADIAZOLIDIN-3-ONE 1,1-DIOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C6 521 doub 1 n y C1 C2 521 sing 2 n y C1 H1 521 sing 3 n n C2 C3 521 doub 4 n y C2 H2 521 sing 5 n n C3 C4 521 sing 6 n y C3 H3 521 sing 7 n n C4 C7 521 sing 8 n y C4 C5 521 doub 9 n y C5 C6 521 sing 10 n y C5 H5 521 sing 11 n n C6 H6 521 sing 12 n n C7 C8 521 doub 13 n y C7 S1 521 sing 14 n y N1 S2 521 sing 15 n n N1 C11 521 sing 16 n n N1 C9 521 sing 17 n n N2 S2 521 sing 18 n n N2 C12 521 sing 19 n n N2 HN2 521 sing 20 n n C9 C8 521 sing 21 n y C9 C10 521 doub 22 n y C8 CL1 521 sing 23 n n C10 S1 521 sing 24 n y C10 H10 521 sing 25 n n C11 C12 521 sing 26 n n C11 H111 521 sing 27 n n C11 H112 521 sing 28 n n C12 O1 521 doub 29 n n S2 O3 521 doub 30 n n S2 O2 521 doub 31 n n # _atom_sites.entry_id 2NTA _atom_sites.fract_transf_matrix[1][1] 0.011331 _atom_sites.fract_transf_matrix[1][2] 0.006542 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013084 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0096 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 521 A 1 301 1 521 124 . C 3 HOH A 1 302 1 HOH HOH . C 3 HOH A 2 303 2 HOH HOH . C 3 HOH A 3 304 3 HOH HOH . C 3 HOH A 4 305 4 HOH HOH . C 3 HOH A 5 306 5 HOH HOH . C 3 HOH A 6 307 6 HOH HOH . C 3 HOH A 7 308 7 HOH HOH . C 3 HOH A 8 309 8 HOH HOH . C 3 HOH A 9 310 9 HOH HOH . C 3 HOH A 10 311 10 HOH HOH . C 3 HOH A 11 312 11 HOH HOH . C 3 HOH A 12 313 12 HOH HOH . C 3 HOH A 13 314 13 HOH HOH . C 3 HOH A 14 315 14 HOH HOH . C 3 HOH A 15 316 15 HOH HOH . C 3 HOH A 16 317 16 HOH HOH . C 3 HOH A 17 318 17 HOH HOH . C 3 HOH A 18 319 18 HOH HOH . C 3 HOH A 19 320 19 HOH HOH . C 3 HOH A 20 321 20 HOH HOH . C 3 HOH A 21 322 21 HOH HOH . C 3 HOH A 22 323 22 HOH HOH . C 3 HOH A 23 324 23 HOH HOH . C 3 HOH A 24 325 24 HOH HOH . C 3 HOH A 25 326 25 HOH HOH . C 3 HOH A 26 327 27 HOH HOH . C 3 HOH A 27 328 28 HOH HOH . C 3 HOH A 28 329 29 HOH HOH . C 3 HOH A 29 330 30 HOH HOH . C 3 HOH A 30 331 31 HOH HOH . C 3 HOH A 31 332 32 HOH HOH . C 3 HOH A 32 333 33 HOH HOH . C 3 HOH A 33 334 34 HOH HOH . C 3 HOH A 34 335 35 HOH HOH . C 3 HOH A 35 336 36 HOH HOH . C 3 HOH A 36 337 37 HOH HOH . C 3 HOH A 37 338 38 HOH HOH . C 3 HOH A 38 339 39 HOH HOH . C 3 HOH A 39 340 40 HOH HOH . C 3 HOH A 40 341 41 HOH HOH . C 3 HOH A 41 342 42 HOH HOH . C 3 HOH A 42 343 43 HOH HOH . C 3 HOH A 43 344 44 HOH HOH . C 3 HOH A 44 345 45 HOH HOH . C 3 HOH A 45 346 46 HOH HOH . C 3 HOH A 46 347 47 HOH HOH . C 3 HOH A 47 348 48 HOH HOH . C 3 HOH A 48 349 49 HOH HOH . C 3 HOH A 49 350 50 HOH HOH . C 3 HOH A 50 351 51 HOH HOH . C 3 HOH A 51 352 52 HOH HOH . C 3 HOH A 52 353 53 HOH HOH . C 3 HOH A 53 354 54 HOH HOH . C 3 HOH A 54 355 55 HOH HOH . C 3 HOH A 55 356 56 HOH HOH . C 3 HOH A 56 357 57 HOH HOH . C 3 HOH A 57 358 58 HOH HOH . C 3 HOH A 58 359 59 HOH HOH . C 3 HOH A 59 360 60 HOH HOH . C 3 HOH A 60 361 61 HOH HOH . C 3 HOH A 61 362 62 HOH HOH . C 3 HOH A 62 363 63 HOH HOH . C 3 HOH A 63 364 64 HOH HOH . C 3 HOH A 64 365 65 HOH HOH . C 3 HOH A 65 366 66 HOH HOH . C 3 HOH A 66 367 67 HOH HOH . C 3 HOH A 67 368 68 HOH HOH . C 3 HOH A 68 369 69 HOH HOH . C 3 HOH A 69 370 70 HOH HOH . C 3 HOH A 70 371 71 HOH HOH . C 3 HOH A 71 372 72 HOH HOH . C 3 HOH A 72 373 73 HOH HOH . C 3 HOH A 73 374 75 HOH HOH . C 3 HOH A 74 375 76 HOH HOH . C 3 HOH A 75 376 77 HOH HOH . C 3 HOH A 76 377 78 HOH HOH . C 3 HOH A 77 378 79 HOH HOH . C 3 HOH A 78 379 80 HOH HOH . C 3 HOH A 79 380 81 HOH HOH . C 3 HOH A 80 381 83 HOH HOH . C 3 HOH A 81 382 84 HOH HOH . C 3 HOH A 82 383 85 HOH HOH . C 3 HOH A 83 384 86 HOH HOH . C 3 HOH A 84 385 87 HOH HOH . C 3 HOH A 85 386 88 HOH HOH . C 3 HOH A 86 387 89 HOH HOH . C 3 HOH A 87 388 90 HOH HOH . C 3 HOH A 88 389 91 HOH HOH . C 3 HOH A 89 390 92 HOH HOH . C 3 HOH A 90 391 93 HOH HOH . C 3 HOH A 91 392 94 HOH HOH . C 3 HOH A 92 393 95 HOH HOH . C 3 HOH A 93 394 96 HOH HOH . C 3 HOH A 94 395 97 HOH HOH . C 3 HOH A 95 396 98 HOH HOH . C 3 HOH A 96 397 99 HOH HOH . C 3 HOH A 97 398 100 HOH HOH . C 3 HOH A 98 399 102 HOH HOH . C 3 HOH A 99 400 104 HOH HOH . C 3 HOH A 100 401 106 HOH HOH . C 3 HOH A 101 402 107 HOH HOH . C 3 HOH A 102 403 108 HOH HOH . C 3 HOH A 103 404 109 HOH HOH . C 3 HOH A 104 405 111 HOH HOH . C 3 HOH A 105 406 112 HOH HOH . C 3 HOH A 106 407 113 HOH HOH . C 3 HOH A 107 408 114 HOH HOH . C 3 HOH A 108 409 115 HOH HOH . C 3 HOH A 109 410 116 HOH HOH . C 3 HOH A 110 411 117 HOH HOH . C 3 HOH A 111 412 118 HOH HOH . C 3 HOH A 112 413 119 HOH HOH . C 3 HOH A 113 414 120 HOH HOH . C 3 HOH A 114 415 121 HOH HOH . C 3 HOH A 115 416 122 HOH HOH . C 3 HOH A 116 417 123 HOH HOH . C 3 HOH A 117 418 124 HOH HOH . C 3 HOH A 118 419 125 HOH HOH . C 3 HOH A 119 420 126 HOH HOH . C 3 HOH A 120 421 127 HOH HOH . C 3 HOH A 121 422 128 HOH HOH . C 3 HOH A 122 423 129 HOH HOH . C 3 HOH A 123 424 130 HOH HOH . C 3 HOH A 124 425 131 HOH HOH . C 3 HOH A 125 426 132 HOH HOH . C 3 HOH A 126 427 133 HOH HOH . C 3 HOH A 127 428 134 HOH HOH . C 3 HOH A 128 429 135 HOH HOH . C 3 HOH A 129 430 136 HOH HOH . C 3 HOH A 130 431 137 HOH HOH . C 3 HOH A 131 432 138 HOH HOH . C 3 HOH A 132 433 139 HOH HOH . C 3 HOH A 133 434 140 HOH HOH . C 3 HOH A 134 435 141 HOH HOH . C 3 HOH A 135 436 142 HOH HOH . C 3 HOH A 136 437 143 HOH HOH . C 3 HOH A 137 438 145 HOH HOH . C 3 HOH A 138 439 146 HOH HOH . C 3 HOH A 139 440 147 HOH HOH . C 3 HOH A 140 441 148 HOH HOH . C 3 HOH A 141 442 149 HOH HOH . C 3 HOH A 142 443 150 HOH HOH . C 3 HOH A 143 444 151 HOH HOH . C 3 HOH A 144 445 152 HOH HOH . C 3 HOH A 145 446 153 HOH HOH . C 3 HOH A 146 447 154 HOH HOH . C 3 HOH A 147 448 155 HOH HOH . C 3 HOH A 148 449 156 HOH HOH . C 3 HOH A 149 450 157 HOH HOH . C 3 HOH A 150 451 158 HOH HOH . C 3 HOH A 151 452 159 HOH HOH . C 3 HOH A 152 453 160 HOH HOH . C 3 HOH A 153 454 161 HOH HOH . C 3 HOH A 154 455 162 HOH HOH . C 3 HOH A 155 456 163 HOH HOH . C 3 HOH A 156 457 164 HOH HOH . C 3 HOH A 157 458 166 HOH HOH . C 3 HOH A 158 459 169 HOH HOH . C 3 HOH A 159 460 170 HOH HOH . C 3 HOH A 160 461 171 HOH HOH . C 3 HOH A 161 462 172 HOH HOH . C 3 HOH A 162 463 174 HOH HOH . C 3 HOH A 163 464 175 HOH HOH . C 3 HOH A 164 465 176 HOH HOH . C 3 HOH A 165 466 178 HOH HOH . C 3 HOH A 166 467 179 HOH HOH . C 3 HOH A 167 468 181 HOH HOH . C 3 HOH A 168 469 182 HOH HOH . C 3 HOH A 169 470 184 HOH HOH . C 3 HOH A 170 471 186 HOH HOH . C 3 HOH A 171 472 187 HOH HOH . C 3 HOH A 172 473 188 HOH HOH . C 3 HOH A 173 474 189 HOH HOH . C 3 HOH A 174 475 190 HOH HOH . C 3 HOH A 175 476 191 HOH HOH . C 3 HOH A 176 477 192 HOH HOH . C 3 HOH A 177 478 193 HOH HOH . C 3 HOH A 178 479 195 HOH HOH . C 3 HOH A 179 480 196 HOH HOH . C 3 HOH A 180 481 197 HOH HOH . C 3 HOH A 181 482 198 HOH HOH . C 3 HOH A 182 483 200 HOH HOH . C 3 HOH A 183 484 201 HOH HOH . C 3 HOH A 184 485 202 HOH HOH . C 3 HOH A 185 486 203 HOH HOH . C 3 HOH A 186 487 204 HOH HOH . C 3 HOH A 187 488 205 HOH HOH . C 3 HOH A 188 489 207 HOH HOH . C 3 HOH A 189 490 208 HOH HOH . C 3 HOH A 190 491 210 HOH HOH . C 3 HOH A 191 492 211 HOH HOH . C 3 HOH A 192 493 212 HOH HOH . C 3 HOH A 193 494 216 HOH HOH . C 3 HOH A 194 495 217 HOH HOH . C 3 HOH A 195 496 218 HOH HOH . C 3 HOH A 196 497 219 HOH HOH . C 3 HOH A 197 498 220 HOH HOH . C 3 HOH A 198 499 221 HOH HOH . C 3 HOH A 199 500 222 HOH HOH . C 3 HOH A 200 501 223 HOH HOH . C 3 HOH A 201 502 225 HOH HOH . C 3 HOH A 202 503 226 HOH HOH . C 3 HOH A 203 504 227 HOH HOH . C 3 HOH A 204 505 228 HOH HOH . C 3 HOH A 205 506 233 HOH HOH . C 3 HOH A 206 507 234 HOH HOH . C 3 HOH A 207 508 235 HOH HOH . C 3 HOH A 208 509 240 HOH HOH . C 3 HOH A 209 510 241 HOH HOH . C 3 HOH A 210 511 242 HOH HOH . C 3 HOH A 211 512 243 HOH HOH . C 3 HOH A 212 513 244 HOH HOH . C 3 HOH A 213 514 245 HOH HOH . C 3 HOH A 214 515 246 HOH HOH . C 3 HOH A 215 516 247 HOH HOH . C 3 HOH A 216 517 248 HOH HOH . C 3 HOH A 217 518 249 HOH HOH . C 3 HOH A 218 519 250 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 521 . . . B 2 29.388 -32.553 1.009 1 47.79 ? C1 521 301 A 1 HETATM 2 C C2 521 . . . B 2 30.644 -33.195 0.863 1 46.28 ? C2 521 301 A 1 HETATM 3 C C3 521 . . . B 2 31.689 -32.566 0.14 1 45.23 ? C3 521 301 A 1 HETATM 4 C C4 521 . . . B 2 31.508 -31.285 -0.454 1 43.73 ? C4 521 301 A 1 HETATM 5 C C5 521 . . . B 2 30.224 -30.642 -0.295 1 46.32 ? C5 521 301 A 1 HETATM 6 C C6 521 . . . B 2 29.176 -31.274 0.432 1 47.35 ? C6 521 301 A 1 HETATM 7 C C7 521 . . . B 2 32.638 -30.633 -1.198 1 40.5 ? C7 521 301 A 1 HETATM 8 N N1 521 . . . B 2 34.457 -28.523 -3.748 1 34.6 ? N1 521 301 A 1 HETATM 9 N N2 521 . . . B 2 35.279 -27.497 -5.857 1 32.27 ? N2 521 301 A 1 HETATM 10 C C9 521 . . . B 2 34.033 -29.396 -2.693 1 36.43 ? C9 521 301 A 1 HETATM 11 C C8 521 . . . B 2 32.684 -29.801 -2.352 1 37.47 ? C8 521 301 A 1 HETATM 12 C C10 521 . . . B 2 34.929 -29.96 -1.799 1 38.58 ? C10 521 301 A 1 HETATM 13 S S1 521 . . . B 2 34.224 -30.919 -0.597 1 42.17 ? S1 521 301 A 1 HETATM 14 C C11 521 . . . B 2 34.482 -27.038 -3.631 1 33.64 ? C11 521 301 A 1 HETATM 15 C C12 521 . . . B 2 34.991 -26.473 -4.934 1 32.28 ? C12 521 301 A 1 HETATM 16 O O1 521 . . . B 2 35.132 -25.289 -5.16 1 31.28 ? O1 521 301 A 1 HETATM 17 S S2 521 . . . B 2 34.986 -29.067 -5.294 1 33.2 ? S2 521 301 A 1 HETATM 18 O O2 521 . . . B 2 36.256 -29.762 -5.166 1 34.4 ? O2 521 301 A 1 HETATM 19 O O3 521 . . . B 2 33.873 -29.63 -6.037 1 29.66 ? O3 521 301 A 1 HETATM 20 CL CL1 521 . . . B 2 31.303 -29.336 -3.263 1 27.17 ? CL1 521 301 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 20 #