data_2NTE # _model_server_result.job_id P-yFyXZXk5mfNMk5Xhylrw _model_server_result.datetime_utc '2024-12-04 08:51:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2nte # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":309}' # _entry.id 2NTE # _exptl.entry_id 2NTE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2NTE _cell.length_a 57.441 _cell.length_b 75.797 _cell.length_c 116.57 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2NTE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,M 1 1 B,H,I,J,K,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 K N N ? 4 L N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id H _struct_conn.ptnr1_label_atom_id O3 _struct_conn.ptnr1_label_comp_id SO4 _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id SO4 _struct_conn.ptnr1_auth_seq_id 301 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id OG _struct_conn.ptnr2_label_comp_id SER _struct_conn.ptnr2_label_seq_id 8 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id SER _struct_conn.ptnr2_auth_seq_id 575 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.05 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 2NTE _atom_sites.fract_transf_matrix[1][1] 0.017409 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013193 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008579 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 302 302 SO4 SO4 . D 3 CL A 1 304 304 CL CL . E 4 EDO A 1 307 307 EDO EDO . F 4 EDO A 1 309 309 EDO EDO . G 4 EDO A 1 310 310 EDO EDO . H 2 SO4 B 1 301 301 SO4 SO4 . I 3 CL B 1 306 306 CL CL . J 3 CL B 1 305 305 CL CL . K 4 EDO B 1 308 308 EDO EDO . L 4 EDO B 1 311 311 EDO EDO . M 5 HOH A 1 3 3 HOH HOH . M 5 HOH A 2 5 5 HOH HOH . M 5 HOH A 3 6 6 HOH HOH . M 5 HOH A 4 8 8 HOH HOH . M 5 HOH A 5 10 10 HOH HOH . M 5 HOH A 6 11 11 HOH HOH . M 5 HOH A 7 14 14 HOH HOH . M 5 HOH A 8 15 15 HOH HOH . M 5 HOH A 9 16 16 HOH HOH . M 5 HOH A 10 17 17 HOH HOH . M 5 HOH A 11 23 23 HOH HOH . M 5 HOH A 12 26 26 HOH HOH . M 5 HOH A 13 30 30 HOH HOH . M 5 HOH A 14 33 33 HOH HOH . M 5 HOH A 15 34 34 HOH HOH . M 5 HOH A 16 38 38 HOH HOH . M 5 HOH A 17 40 40 HOH HOH . M 5 HOH A 18 42 42 HOH HOH . M 5 HOH A 19 43 43 HOH HOH . M 5 HOH A 20 44 44 HOH HOH . M 5 HOH A 21 47 47 HOH HOH . M 5 HOH A 22 48 48 HOH HOH . M 5 HOH A 23 49 49 HOH HOH . M 5 HOH A 24 50 50 HOH HOH . M 5 HOH A 25 51 51 HOH HOH . M 5 HOH A 26 52 52 HOH HOH . M 5 HOH A 27 53 53 HOH HOH . M 5 HOH A 28 54 54 HOH HOH . M 5 HOH A 29 57 57 HOH HOH . M 5 HOH A 30 59 59 HOH HOH . M 5 HOH A 31 60 60 HOH HOH . M 5 HOH A 32 62 62 HOH HOH . M 5 HOH A 33 65 65 HOH HOH . M 5 HOH A 34 68 68 HOH HOH . M 5 HOH A 35 72 72 HOH HOH . M 5 HOH A 36 75 75 HOH HOH . M 5 HOH A 37 77 77 HOH HOH . M 5 HOH A 38 78 78 HOH HOH . M 5 HOH A 39 80 80 HOH HOH . M 5 HOH A 40 81 81 HOH HOH . M 5 HOH A 41 82 82 HOH HOH . M 5 HOH A 42 84 84 HOH HOH . M 5 HOH A 43 87 87 HOH HOH . M 5 HOH A 44 88 88 HOH HOH . M 5 HOH A 45 93 93 HOH HOH . M 5 HOH A 46 94 94 HOH HOH . M 5 HOH A 47 95 95 HOH HOH . M 5 HOH A 48 96 96 HOH HOH . M 5 HOH A 49 99 99 HOH HOH . M 5 HOH A 50 101 101 HOH HOH . M 5 HOH A 51 103 103 HOH HOH . M 5 HOH A 52 106 106 HOH HOH . M 5 HOH A 53 107 107 HOH HOH . M 5 HOH A 54 110 110 HOH HOH . M 5 HOH A 55 112 112 HOH HOH . M 5 HOH A 56 113 113 HOH HOH . M 5 HOH A 57 117 117 HOH HOH . M 5 HOH A 58 119 119 HOH HOH . M 5 HOH A 59 122 122 HOH HOH . M 5 HOH A 60 123 123 HOH HOH . M 5 HOH A 61 124 124 HOH HOH . M 5 HOH A 62 126 126 HOH HOH . M 5 HOH A 63 127 127 HOH HOH . M 5 HOH A 64 128 128 HOH HOH . M 5 HOH A 65 129 129 HOH HOH . M 5 HOH A 66 132 132 HOH HOH . M 5 HOH A 67 134 134 HOH HOH . M 5 HOH A 68 135 135 HOH HOH . M 5 HOH A 69 138 138 HOH HOH . M 5 HOH A 70 140 140 HOH HOH . M 5 HOH A 71 141 141 HOH HOH . M 5 HOH A 72 142 142 HOH HOH . M 5 HOH A 73 143 143 HOH HOH . M 5 HOH A 74 151 151 HOH HOH . M 5 HOH A 75 154 154 HOH HOH . M 5 HOH A 76 157 157 HOH HOH . M 5 HOH A 77 158 158 HOH HOH . M 5 HOH A 78 160 160 HOH HOH . M 5 HOH A 79 163 163 HOH HOH . M 5 HOH A 80 164 164 HOH HOH . M 5 HOH A 81 166 166 HOH HOH . M 5 HOH A 82 175 175 HOH HOH . M 5 HOH A 83 176 176 HOH HOH . M 5 HOH A 84 177 177 HOH HOH . M 5 HOH A 85 183 183 HOH HOH . M 5 HOH A 86 186 186 HOH HOH . M 5 HOH A 87 187 187 HOH HOH . M 5 HOH A 88 190 190 HOH HOH . M 5 HOH A 89 191 191 HOH HOH . M 5 HOH A 90 193 193 HOH HOH . M 5 HOH A 91 196 196 HOH HOH . M 5 HOH A 92 198 198 HOH HOH . M 5 HOH A 93 199 199 HOH HOH . M 5 HOH A 94 201 201 HOH HOH . M 5 HOH A 95 202 202 HOH HOH . M 5 HOH A 96 203 203 HOH HOH . M 5 HOH A 97 204 204 HOH HOH . M 5 HOH A 98 206 206 HOH HOH . M 5 HOH A 99 209 209 HOH HOH . M 5 HOH A 100 211 211 HOH HOH . M 5 HOH A 101 215 215 HOH HOH . M 5 HOH A 102 218 218 HOH HOH . M 5 HOH A 103 219 219 HOH HOH . M 5 HOH A 104 220 220 HOH HOH . M 5 HOH A 105 222 222 HOH HOH . M 5 HOH A 106 224 224 HOH HOH . M 5 HOH A 107 227 227 HOH HOH . M 5 HOH A 108 228 228 HOH HOH . M 5 HOH A 109 229 229 HOH HOH . M 5 HOH A 110 234 234 HOH HOH . M 5 HOH A 111 235 235 HOH HOH . M 5 HOH A 112 236 236 HOH HOH . M 5 HOH A 113 237 237 HOH HOH . M 5 HOH A 114 238 238 HOH HOH . M 5 HOH A 115 239 239 HOH HOH . M 5 HOH A 116 240 240 HOH HOH . M 5 HOH A 117 241 241 HOH HOH . M 5 HOH A 118 244 244 HOH HOH . M 5 HOH A 119 245 245 HOH HOH . M 5 HOH A 120 246 246 HOH HOH . M 5 HOH A 121 254 254 HOH HOH . M 5 HOH A 122 255 255 HOH HOH . M 5 HOH A 123 257 257 HOH HOH . M 5 HOH A 124 258 258 HOH HOH . M 5 HOH A 125 270 270 HOH HOH . M 5 HOH A 126 271 271 HOH HOH . M 5 HOH A 127 273 273 HOH HOH . M 5 HOH A 128 274 274 HOH HOH . M 5 HOH A 129 276 276 HOH HOH . M 5 HOH A 130 278 278 HOH HOH . M 5 HOH A 131 280 280 HOH HOH . M 5 HOH A 132 284 284 HOH HOH . M 5 HOH A 133 286 286 HOH HOH . N 5 HOH B 1 1 1 HOH HOH . N 5 HOH B 2 7 7 HOH HOH . N 5 HOH B 3 9 9 HOH HOH . N 5 HOH B 4 12 12 HOH HOH . N 5 HOH B 5 13 13 HOH HOH . N 5 HOH B 6 18 18 HOH HOH . N 5 HOH B 7 19 19 HOH HOH . N 5 HOH B 8 22 22 HOH HOH . N 5 HOH B 9 24 24 HOH HOH . N 5 HOH B 10 25 25 HOH HOH . N 5 HOH B 11 27 27 HOH HOH . N 5 HOH B 12 31 31 HOH HOH . N 5 HOH B 13 32 32 HOH HOH . N 5 HOH B 14 35 35 HOH HOH . N 5 HOH B 15 36 36 HOH HOH . N 5 HOH B 16 37 37 HOH HOH . N 5 HOH B 17 39 39 HOH HOH . N 5 HOH B 18 41 41 HOH HOH . N 5 HOH B 19 45 45 HOH HOH . N 5 HOH B 20 46 46 HOH HOH . N 5 HOH B 21 56 56 HOH HOH . N 5 HOH B 22 58 58 HOH HOH . N 5 HOH B 23 61 61 HOH HOH . N 5 HOH B 24 63 63 HOH HOH . N 5 HOH B 25 66 66 HOH HOH . N 5 HOH B 26 67 67 HOH HOH . N 5 HOH B 27 69 69 HOH HOH . N 5 HOH B 28 74 74 HOH HOH . N 5 HOH B 29 76 76 HOH HOH . N 5 HOH B 30 83 83 HOH HOH . N 5 HOH B 31 85 85 HOH HOH . N 5 HOH B 32 91 91 HOH HOH . N 5 HOH B 33 92 92 HOH HOH . N 5 HOH B 34 97 97 HOH HOH . N 5 HOH B 35 100 100 HOH HOH . N 5 HOH B 36 102 102 HOH HOH . N 5 HOH B 37 104 104 HOH HOH . N 5 HOH B 38 105 105 HOH HOH . N 5 HOH B 39 108 108 HOH HOH . N 5 HOH B 40 111 111 HOH HOH . N 5 HOH B 41 114 114 HOH HOH . N 5 HOH B 42 115 115 HOH HOH . N 5 HOH B 43 116 116 HOH HOH . N 5 HOH B 44 118 118 HOH HOH . N 5 HOH B 45 121 121 HOH HOH . N 5 HOH B 46 125 125 HOH HOH . N 5 HOH B 47 130 130 HOH HOH . N 5 HOH B 48 133 133 HOH HOH . N 5 HOH B 49 137 137 HOH HOH . N 5 HOH B 50 139 139 HOH HOH . N 5 HOH B 51 144 144 HOH HOH . N 5 HOH B 52 147 147 HOH HOH . N 5 HOH B 53 148 148 HOH HOH . N 5 HOH B 54 149 149 HOH HOH . N 5 HOH B 55 150 150 HOH HOH . N 5 HOH B 56 152 152 HOH HOH . N 5 HOH B 57 161 161 HOH HOH . N 5 HOH B 58 162 162 HOH HOH . N 5 HOH B 59 165 165 HOH HOH . N 5 HOH B 60 167 167 HOH HOH . N 5 HOH B 61 169 169 HOH HOH . N 5 HOH B 62 170 170 HOH HOH . N 5 HOH B 63 172 172 HOH HOH . N 5 HOH B 64 184 184 HOH HOH . N 5 HOH B 65 185 185 HOH HOH . N 5 HOH B 66 189 189 HOH HOH . N 5 HOH B 67 192 192 HOH HOH . N 5 HOH B 68 194 194 HOH HOH . N 5 HOH B 69 195 195 HOH HOH . N 5 HOH B 70 207 207 HOH HOH . N 5 HOH B 71 208 208 HOH HOH . N 5 HOH B 72 210 210 HOH HOH . N 5 HOH B 73 212 212 HOH HOH . N 5 HOH B 74 213 213 HOH HOH . N 5 HOH B 75 214 214 HOH HOH . N 5 HOH B 76 216 216 HOH HOH . N 5 HOH B 77 217 217 HOH HOH . N 5 HOH B 78 221 221 HOH HOH . N 5 HOH B 79 223 223 HOH HOH . N 5 HOH B 80 225 225 HOH HOH . N 5 HOH B 81 226 226 HOH HOH . N 5 HOH B 82 230 230 HOH HOH . N 5 HOH B 83 232 232 HOH HOH . N 5 HOH B 84 233 233 HOH HOH . N 5 HOH B 85 242 242 HOH HOH . N 5 HOH B 86 243 243 HOH HOH . N 5 HOH B 87 247 247 HOH HOH . N 5 HOH B 88 248 248 HOH HOH . N 5 HOH B 89 249 249 HOH HOH . N 5 HOH B 90 250 250 HOH HOH . N 5 HOH B 91 251 251 HOH HOH . N 5 HOH B 92 252 252 HOH HOH . N 5 HOH B 93 253 253 HOH HOH . N 5 HOH B 94 256 256 HOH HOH . N 5 HOH B 95 259 259 HOH HOH . N 5 HOH B 96 262 262 HOH HOH . N 5 HOH B 97 263 263 HOH HOH . N 5 HOH B 98 264 264 HOH HOH . N 5 HOH B 99 265 265 HOH HOH . N 5 HOH B 100 268 268 HOH HOH . N 5 HOH B 101 269 269 HOH HOH . N 5 HOH B 102 272 272 HOH HOH . N 5 HOH B 103 275 275 HOH HOH . N 5 HOH B 104 277 277 HOH HOH . N 5 HOH B 105 279 279 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 4 29.458 -10.896 9.536 1 51.44 ? C1 EDO 309 A 1 HETATM 2 O O1 EDO . . . F 4 28.188 -10.334 9.021 1 41.02 ? O1 EDO 309 A 1 HETATM 3 C C2 EDO . . . F 4 30.214 -10.393 10.789 1 50.77 ? C2 EDO 309 A 1 HETATM 4 O O2 EDO . . . F 4 30.674 -8.988 10.902 1 57.37 ? O2 EDO 309 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #