data_2NUA # _model_server_result.job_id EvLRUSQrzWnGYVC7yWIJWQ _model_server_result.datetime_utc '2024-12-03 13:33:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2nua # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1300}' # _entry.id 2NUA # _exptl.entry_id 2NUA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2NUA _cell.length_a 97.51 _cell.length_b 97.51 _cell.length_c 390.25 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2NUA _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? tetrameric 4 author_defined_assembly 1 ? tetrameric 4 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,P,Q 1 1,2 C,D,K,L,M,N,O 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z+1/4 0 1 0 1 0 0 0 0 -1 0 0 97.5625 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 J N N ? 5 L N N ? 5 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B SG CYS 325 B CYS 325 1_555 J S1P COA . B COA 1325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? covale ? covale2 D SG CYS 325 E CYS 325 1_555 O S1P COA . E COA 1325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 70 n y N1A C6A COA doub 71 n y C2A N3A COA doub 72 n y C2A H2A COA sing 73 n n N3A C4A COA sing 74 n y C4A C5A COA doub 75 n y C4A N9A COA sing 76 n y C5A C6A COA sing 77 n y C5A N7A COA sing 78 n y C6A N6A COA sing 79 n n N6A H61A COA sing 80 n n N6A H62A COA sing 81 n n N7A C8A COA doub 82 n y C8A N9A COA sing 83 n y C8A H8A COA sing 84 n n N9A C1B COA sing 85 n n C1B C2B COA sing 86 n n C1B O4B COA sing 87 n n C1B H1B COA sing 88 n n C2B O2B COA sing 89 n n C2B C3B COA sing 90 n n C2B H2B COA sing 91 n n O2B HO2A COA sing 92 n n C3B O3B COA sing 93 n n C3B C4B COA sing 94 n n C3B H3B COA sing 95 n n O3B P3B COA sing 96 n n P3B O7A COA doub 97 n n P3B O8A COA sing 98 n n P3B O9A COA sing 99 n n O8A HOA8 COA sing 100 n n O9A HOA9 COA sing 101 n n C4B O4B COA sing 102 n n C4B C5B COA sing 103 n n C4B H4B COA sing 104 n n C5B O5B COA sing 105 n n C5B H51A COA sing 106 n n C5B H52A COA sing 107 n n O5B P1A COA sing 108 n n P1A O1A COA doub 109 n n P1A O2A COA sing 110 n n P1A O3A COA sing 111 n n O2A HOA2 COA sing 112 n n O3A P2A COA sing 113 n n P2A O4A COA doub 114 n n P2A O5A COA sing 115 n n P2A O6A COA sing 116 n n O5A HOA5 COA sing 117 n n O6A CCP COA sing 118 n n CBP CCP COA sing 119 n n CBP CDP COA sing 120 n n CBP CEP COA sing 121 n n CBP CAP COA sing 122 n n CCP H121 COA sing 123 n n CCP H122 COA sing 124 n n CDP H131 COA sing 125 n n CDP H132 COA sing 126 n n CDP H133 COA sing 127 n n CEP H141 COA sing 128 n n CEP H142 COA sing 129 n n CEP H143 COA sing 130 n n CAP OAP COA sing 131 n n CAP C9P COA sing 132 n n CAP H10 COA sing 133 n n OAP HO1 COA sing 134 n n C9P O9P COA doub 135 n n C9P N8P COA sing 136 n n N8P C7P COA sing 137 n n N8P HN8 COA sing 138 n n C7P C6P COA sing 139 n n C7P H71 COA sing 140 n n C7P H72 COA sing 141 n n C6P C5P COA sing 142 n n C6P H61 COA sing 143 n n C6P H62 COA sing 144 n n C5P O5P COA doub 145 n n C5P N4P COA sing 146 n n N4P C3P COA sing 147 n n N4P HN4 COA sing 148 n n C3P C2P COA sing 149 n n C3P H31 COA sing 150 n n C3P H32 COA sing 151 n n C2P S1P COA sing 152 n n C2P H21 COA sing 153 n n C2P H22 COA sing 154 n n S1P HS1 COA sing 155 n n # _atom_sites.entry_id 2NUA _atom_sites.fract_transf_matrix[1][1] 0.010255 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010255 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002562 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 PO4 A 1 1600 1600 PO4 PO4 . F 4 SO4 A 1 1700 1700 SO4 SO4 . G 5 COA A 1 1300 1300 COA COA . H 4 SO4 B 1 1400 1400 SO4 SO4 . I 4 SO4 B 1 1500 1500 SO4 SO4 . J 5 COA B 1 1325 325 COA CST . K 3 PO4 D 1 1601 1601 PO4 PO4 . L 5 COA D 1 1301 1301 COA COA . M 4 SO4 E 1 1401 1401 SO4 SO4 . N 4 SO4 E 1 1501 1501 SO4 SO4 . O 5 COA E 1 1325 325 COA CST . P 6 HOH A 1 1701 1 HOH HOH . P 6 HOH A 2 1702 2 HOH HOH . P 6 HOH A 3 1703 3 HOH HOH . P 6 HOH A 4 1704 4 HOH HOH . Q 6 HOH B 1 1501 5 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . G 5 30.351 61.417 47.817 1 58.47 ? N1A COA 1300 A 1 HETATM 2 C C2A COA . . . G 5 29.63 62.513 48.064 1 57.69 ? C2A COA 1300 A 1 HETATM 3 N N3A COA . . . G 5 28.44 62.619 48.639 1 57.38 ? N3A COA 1300 A 1 HETATM 4 C C4A COA . . . G 5 27.969 61.408 48.986 1 56.7 ? C4A COA 1300 A 1 HETATM 5 C C5A COA . . . G 5 28.581 60.192 48.79 1 56.47 ? C5A COA 1300 A 1 HETATM 6 C C6A COA . . . G 5 29.847 60.214 48.178 1 57.38 ? C6A COA 1300 A 1 HETATM 7 N N6A COA . . . G 5 30.579 59.121 47.945 1 58.66 ? N6A COA 1300 A 1 HETATM 8 N N7A COA . . . G 5 27.787 59.161 49.276 1 56.07 ? N7A COA 1300 A 1 HETATM 9 C C8A COA . . . G 5 26.736 59.776 49.763 1 56.8 ? C8A COA 1300 A 1 HETATM 10 N N9A COA . . . G 5 26.8 61.137 49.649 1 57.04 ? N9A COA 1300 A 1 HETATM 11 C C1B COA . . . G 5 25.923 62.19 50.14 1 58.56 ? C1B COA 1300 A 1 HETATM 12 C C2B COA . . . G 5 24.455 62.314 49.729 1 59.47 ? C2B COA 1300 A 1 HETATM 13 O O2B COA . . . G 5 24.335 63.461 48.922 1 65.09 ? O2B COA 1300 A 1 HETATM 14 C C3B COA . . . G 5 23.752 62.537 51.071 1 60.64 ? C3B COA 1300 A 1 HETATM 15 O O3B COA . . . G 5 22.82 63.63 50.975 1 62.86 ? O3B COA 1300 A 1 HETATM 16 P P3B COA . . . G 5 21.683 63.651 49.822 1 64.1 ? P3B COA 1300 A 1 HETATM 17 O O7A COA . . . G 5 22.015 64.858 48.961 1 60.53 ? O7A COA 1300 A 1 HETATM 18 O O8A COA . . . G 5 21.706 62.316 49.081 1 63.6 ? O8A COA 1300 A 1 HETATM 19 O O9A COA . . . G 5 20.421 63.851 50.638 1 64.42 ? O9A COA 1300 A 1 HETATM 20 C C4B COA . . . G 5 24.88 62.963 52.01 1 59.16 ? C4B COA 1300 A 1 HETATM 21 O O4B COA . . . G 5 26.02 62.253 51.527 1 57.59 ? O4B COA 1300 A 1 HETATM 22 C C5B COA . . . G 5 24.713 62.623 53.467 1 58.29 ? C5B COA 1300 A 1 HETATM 23 O O5B COA . . . G 5 23.683 63.412 54.03 1 58.65 ? O5B COA 1300 A 1 HETATM 24 P P1A COA . . . G 5 22.74 62.822 55.159 1 56.46 ? P1A COA 1300 A 1 HETATM 25 O O1A COA . . . G 5 21.795 63.896 55.531 1 59.63 ? O1A COA 1300 A 1 HETATM 26 O O2A COA . . . G 5 22.22 61.519 54.673 1 57.66 ? O2A COA 1300 A 1 HETATM 27 O O3A COA . . . G 5 23.727 62.558 56.401 1 56.68 ? O3A COA 1300 A 1 HETATM 28 P P2A COA . . . G 5 23.962 63.664 57.547 1 54.64 ? P2A COA 1300 A 1 HETATM 29 O O4A COA . . . G 5 24.296 64.96 56.827 1 54.86 ? O4A COA 1300 A 1 HETATM 30 O O5A COA . . . G 5 22.629 63.68 58.282 1 53.87 ? O5A COA 1300 A 1 HETATM 31 O O6A COA . . . G 5 25.118 63.093 58.368 1 53.25 ? O6A COA 1300 A 1 HETATM 32 C CBP COA . . . G 5 27.411 62.655 58.836 1 53.7 ? CBP COA 1300 A 1 HETATM 33 C CCP COA . . . G 5 26.343 62.661 57.805 1 52.32 ? CCP COA 1300 A 1 HETATM 34 C CDP COA . . . G 5 27.355 64.063 59.407 1 51.66 ? CDP COA 1300 A 1 HETATM 35 C CEP COA . . . G 5 28.775 62.447 58.153 1 52.5 ? CEP COA 1300 A 1 HETATM 36 C CAP COA . . . G 5 27.128 61.546 59.922 1 55.14 ? CAP COA 1300 A 1 HETATM 37 O OAP COA . . . G 5 27.239 60.219 59.364 1 56.78 ? OAP COA 1300 A 1 HETATM 38 C C9P COA . . . G 5 28.224 61.496 61.002 1 56.41 ? C9P COA 1300 A 1 HETATM 39 O O9P COA . . . G 5 29.273 60.872 60.822 1 55.45 ? O9P COA 1300 A 1 HETATM 40 N N8P COA . . . G 5 27.962 62.177 62.134 1 57.66 ? N8P COA 1300 A 1 HETATM 41 C C7P COA . . . G 5 28.901 62.214 63.253 1 57.55 ? C7P COA 1300 A 1 HETATM 42 C C6P COA . . . G 5 29.919 63.305 62.995 1 59.41 ? C6P COA 1300 A 1 HETATM 43 C C5P COA . . . G 5 30.692 63.59 64.261 1 60.91 ? C5P COA 1300 A 1 HETATM 44 O O5P COA . . . G 5 30.082 63.402 65.312 1 60.33 ? O5P COA 1300 A 1 HETATM 45 N N4P COA . . . G 5 31.967 64.023 64.223 1 63.72 ? N4P COA 1300 A 1 HETATM 46 C C3P COA . . . G 5 32.768 64.318 65.422 1 65.25 ? C3P COA 1300 A 1 HETATM 47 C C2P COA . . . G 5 33.091 65.805 65.449 1 65.06 ? C2P COA 1300 A 1 HETATM 48 S S1P COA . . . G 5 33.366 66.18 67.174 1 69 ? S1P COA 1300 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 48 #