data_2NV3 # _model_server_result.job_id 8OMWCUpw6yHZbVlN6l6-Gw _model_server_result.datetime_utc '2024-10-14 08:22:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2nv3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 2NV3 # _exptl.entry_id 2NV3 _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 228.371 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MYRISTIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2NV3 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2NV3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id C1 _struct_conn.ptnr1_label_comp_id MYR _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id MYR _struct_conn.ptnr1_auth_seq_id 1 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id N _struct_conn.ptnr2_label_comp_id GLY _struct_conn.ptnr2_label_seq_id 1 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id GLY _struct_conn.ptnr2_auth_seq_id 2 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.33 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C14 H28 O2' _chem_comp.formula_weight 228.371 _chem_comp.id MYR _chem_comp.mon_nstd_flag . _chem_comp.name 'MYRISTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 MYR doub 216 n n C1 O2 MYR sing 217 n n C1 C2 MYR sing 218 n n O2 HO2 MYR sing 219 n n C2 C3 MYR sing 220 n n C2 H21 MYR sing 221 n n C2 H22 MYR sing 222 n n C3 C4 MYR sing 223 n n C3 H31 MYR sing 224 n n C3 H32 MYR sing 225 n n C4 C5 MYR sing 226 n n C4 H41 MYR sing 227 n n C4 H42 MYR sing 228 n n C5 C6 MYR sing 229 n n C5 H51 MYR sing 230 n n C5 H52 MYR sing 231 n n C6 C7 MYR sing 232 n n C6 H61 MYR sing 233 n n C6 H62 MYR sing 234 n n C7 C8 MYR sing 235 n n C7 H71 MYR sing 236 n n C7 H72 MYR sing 237 n n C8 C9 MYR sing 238 n n C8 H81 MYR sing 239 n n C8 H82 MYR sing 240 n n C9 C10 MYR sing 241 n n C9 H91 MYR sing 242 n n C9 H92 MYR sing 243 n n C10 C11 MYR sing 244 n n C10 H101 MYR sing 245 n n C10 H102 MYR sing 246 n n C11 C12 MYR sing 247 n n C11 H111 MYR sing 248 n n C11 H112 MYR sing 249 n n C12 C13 MYR sing 250 n n C12 H121 MYR sing 251 n n C12 H122 MYR sing 252 n n C13 C14 MYR sing 253 n n C13 H131 MYR sing 254 n n C13 H132 MYR sing 255 n n C14 H141 MYR sing 256 n n C14 H142 MYR sing 257 n n C14 H143 MYR sing 258 n n # _atom_sites.entry_id 2NV3 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id MYR _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 1 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id MYR _pdbx_nonpoly_scheme.auth_mon_id MYR _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MYR . . . B 2 9.194 11.542 -3.729 1 42.51 ? C1 MYR 1 A 1 HETATM 2 O O1 MYR . . . B 2 10.121 11.962 -3.038 1 45.21 ? O1 MYR 1 A 1 HETATM 3 C C2 MYR . . . B 2 8.372 10.365 -3.204 1 34.21 ? C2 MYR 1 A 1 HETATM 4 C C3 MYR . . . B 2 8.108 9.251 -4.244 1 23.25 ? C3 MYR 1 A 1 HETATM 5 C C4 MYR . . . B 2 8.423 7.851 -3.685 1 64.21 ? C4 MYR 1 A 1 HETATM 6 C C5 MYR . . . B 2 7.41 7.412 -2.612 1 35.32 ? C5 MYR 1 A 1 HETATM 7 C C6 MYR . . . B 2 6.889 5.982 -2.853 1 31.01 ? C6 MYR 1 A 1 HETATM 8 C C7 MYR . . . B 2 7.174 5.05 -1.66 1 72.1 ? C7 MYR 1 A 1 HETATM 9 C C8 MYR . . . B 2 5.924 4.82 -0.789 1 62.42 ? C8 MYR 1 A 1 HETATM 10 C C9 MYR . . . B 2 4.807 4.087 -1.556 1 22.41 ? C9 MYR 1 A 1 HETATM 11 C C10 MYR . . . B 2 3.437 4.778 -1.395 1 63.3 ? C10 MYR 1 A 1 HETATM 12 C C11 MYR . . . B 2 2.426 3.991 -0.535 1 1.04 ? C11 MYR 1 A 1 HETATM 13 C C12 MYR . . . B 2 2.257 2.513 -0.944 1 44.13 ? C12 MYR 1 A 1 HETATM 14 C C13 MYR . . . B 2 0.892 1.944 -0.522 1 33.1 ? C13 MYR 1 A 1 HETATM 15 C C14 MYR . . . B 2 0.892 0.409 -0.512 1 14.12 ? C14 MYR 1 A 1 HETATM 16 H H21 MYR . . . B 2 7.407 10.775 -2.851 1 4.42 ? H21 MYR 1 A 1 HETATM 17 H H22 MYR . . . B 2 8.851 9.949 -2.298 1 35.42 ? H22 MYR 1 A 1 HETATM 18 H H31 MYR . . . B 2 8.709 9.434 -5.156 1 42.33 ? H31 MYR 1 A 1 HETATM 19 H H32 MYR . . . B 2 7.05 9.293 -4.573 1 20.14 ? H32 MYR 1 A 1 HETATM 20 H H41 MYR . . . B 2 9.446 7.841 -3.258 1 32.44 ? H41 MYR 1 A 1 HETATM 21 H H42 MYR . . . B 2 8.438 7.111 -4.51 1 14.11 ? H42 MYR 1 A 1 HETATM 22 H H51 MYR . . . B 2 6.558 8.12 -2.588 1 51.03 ? H51 MYR 1 A 1 HETATM 23 H H52 MYR . . . B 2 7.877 7.474 -1.609 1 15.31 ? H52 MYR 1 A 1 HETATM 24 H H61 MYR . . . B 2 7.351 5.566 -3.77 1 72.11 ? H61 MYR 1 A 1 HETATM 25 H H62 MYR . . . B 2 5.8 6.009 -3.054 1 14.14 ? H62 MYR 1 A 1 HETATM 26 H H71 MYR . . . B 2 7.988 5.474 -1.04 1 10.31 ? H71 MYR 1 A 1 HETATM 27 H H72 MYR . . . B 2 7.556 4.077 -2.029 1 2.44 ? H72 MYR 1 A 1 HETATM 28 H H81 MYR . . . B 2 5.545 5.791 -0.415 1 43.44 ? H81 MYR 1 A 1 HETATM 29 H H82 MYR . . . B 2 6.199 4.24 0.114 1 65.52 ? H82 MYR 1 A 1 HETATM 30 H H91 MYR . . . B 2 4.743 3.039 -1.205 1 21.43 ? H91 MYR 1 A 1 HETATM 31 H H92 MYR . . . B 2 5.069 4.024 -2.631 1 13.13 ? H92 MYR 1 A 1 HETATM 32 H H101 MYR . . . B 2 2.995 4.931 -2.399 1 33.13 ? H101 MYR 1 A 1 HETATM 33 H H102 MYR . . . B 2 3.568 5.798 -0.983 1 31.44 ? H102 MYR 1 A 1 HETATM 34 H H111 MYR . . . B 2 1.445 4.506 -0.543 1 22.22 ? H111 MYR 1 A 1 HETATM 35 H H112 MYR . . . B 2 2.761 4.033 0.52 1 34.24 ? H112 MYR 1 A 1 HETATM 36 H H121 MYR . . . B 2 3.07 1.907 -0.498 1 4.53 ? H121 MYR 1 A 1 HETATM 37 H H122 MYR . . . B 2 2.378 2.41 -2.04 1 45.1 ? H122 MYR 1 A 1 HETATM 38 H H131 MYR . . . B 2 0.1 2.31 -1.205 1 33.41 ? H131 MYR 1 A 1 HETATM 39 H H132 MYR . . . B 2 0.616 2.321 0.483 1 61.43 ? H132 MYR 1 A 1 HETATM 40 H H141 MYR . . . B 2 0 0 0 1 0 ? H141 MYR 1 A 1 HETATM 41 H H142 MYR . . . B 2 0.892 0 -1.539 1 74.02 ? H142 MYR 1 A 1 HETATM 42 H H143 MYR . . . B 2 1.783 0 0 1 1 ? H143 MYR 1 A 1 # _model_server_stats.io_time_ms 128 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 52 _model_server_stats.query_time_ms 5306 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 42 #