data_2NV4 # _model_server_result.job_id Ve_-OQaMdnecCOEztoYcyQ _model_server_result.datetime_utc '2024-12-02 10:21:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2nv4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":148}' # _entry.id 2NV4 # _exptl.entry_id 2NV4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2NV4 _cell.length_a 48.812 _cell.length_b 73.496 _cell.length_c 78.545 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2NV4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 130 A CYS 130 1_555 B SG CYS 130 B CYS 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? covale ? covale1 A C MSE 1 A MSE 1 1_555 A N ILE 2 A ILE 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C TRP 56 A TRP 56 1_555 A N MSE 57 A MSE 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 A C MSE 57 A MSE 57 1_555 A N ASP 58 A ASP 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 B C MSE 1 B MSE 1 1_555 B N ILE 2 B ILE 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 B C TRP 56 B TRP 56 1_555 B N MSE 57 B MSE 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale6 B C MSE 57 B MSE 57 1_555 B N ASP 58 B ASP 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 2NV4 _atom_sites.fract_transf_matrix[1][1] 0.020487 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013606 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012732 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ACT A 1 148 1 ACT ACY . D 3 SAM A 1 201 201 SAM SAM . E 3 SAM B 1 202 202 SAM SAM . F 4 HOH A 1 202 2 HOH TIP . F 4 HOH A 2 203 5 HOH TIP . F 4 HOH A 3 204 6 HOH TIP . F 4 HOH A 4 205 7 HOH TIP . F 4 HOH A 5 206 9 HOH TIP . F 4 HOH A 6 207 10 HOH TIP . F 4 HOH A 7 208 11 HOH TIP . F 4 HOH A 8 209 20 HOH TIP . F 4 HOH A 9 210 21 HOH TIP . F 4 HOH A 10 211 22 HOH TIP . F 4 HOH A 11 212 23 HOH TIP . F 4 HOH A 12 213 28 HOH TIP . F 4 HOH A 13 214 29 HOH TIP . F 4 HOH A 14 215 32 HOH TIP . F 4 HOH A 15 216 33 HOH TIP . F 4 HOH A 16 217 34 HOH TIP . F 4 HOH A 17 218 39 HOH TIP . F 4 HOH A 18 219 41 HOH TIP . F 4 HOH A 19 220 43 HOH TIP . F 4 HOH A 20 221 47 HOH TIP . F 4 HOH A 21 222 49 HOH TIP . F 4 HOH A 22 223 50 HOH TIP . F 4 HOH A 23 224 52 HOH TIP . G 4 HOH B 1 203 1 HOH TIP . G 4 HOH B 2 204 3 HOH TIP . G 4 HOH B 3 205 4 HOH TIP . G 4 HOH B 4 206 8 HOH TIP . G 4 HOH B 5 207 12 HOH TIP . G 4 HOH B 6 208 13 HOH TIP . G 4 HOH B 7 209 14 HOH TIP . G 4 HOH B 8 210 15 HOH TIP . G 4 HOH B 9 211 16 HOH TIP . G 4 HOH B 10 212 17 HOH TIP . G 4 HOH B 11 213 18 HOH TIP . G 4 HOH B 12 214 19 HOH TIP . G 4 HOH B 13 215 24 HOH TIP . G 4 HOH B 14 216 25 HOH TIP . G 4 HOH B 15 217 26 HOH TIP . G 4 HOH B 16 218 27 HOH TIP . G 4 HOH B 17 219 30 HOH TIP . G 4 HOH B 18 220 31 HOH TIP . G 4 HOH B 19 221 35 HOH TIP . G 4 HOH B 20 222 36 HOH TIP . G 4 HOH B 21 223 37 HOH TIP . G 4 HOH B 22 224 38 HOH TIP . G 4 HOH B 23 225 40 HOH TIP . G 4 HOH B 24 226 42 HOH TIP . G 4 HOH B 25 227 44 HOH TIP . G 4 HOH B 26 228 45 HOH TIP . G 4 HOH B 27 229 46 HOH TIP . G 4 HOH B 28 230 48 HOH TIP . G 4 HOH B 29 231 51 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . C 2 35.131 50.867 19.688 1 45.85 ? C ACT 148 A 1 HETATM 2 O O ACT . . . C 2 34.497 51.189 20.673 1 43.65 ? O ACT 148 A 1 HETATM 3 O OXT ACT . . . C 2 35.585 49.606 19.555 1 44.1 ? OXT ACT 148 A 1 HETATM 4 C CH3 ACT . . . C 2 35.414 51.882 18.613 1 45.53 ? CH3 ACT 148 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 4 #