data_2NV7 # _model_server_result.job_id HZ7MFwBcF_4gFPeX0DYsNA _model_server_result.datetime_utc '2024-10-18 16:23:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2nv7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 2NV7 # _exptl.entry_id 2NV7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 263.291 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(4-HYDROXYPHENYL)-1-NAPHTHALDEHYDE OXIME' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2NV7 _cell.length_a 52.13 _cell.length_b 88.676 _cell.length_c 100.459 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2NV7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C17 H13 N O2' _chem_comp.formula_weight 263.291 _chem_comp.id 555 _chem_comp.mon_nstd_flag . _chem_comp.name '4-(4-HYDROXYPHENYL)-1-NAPHTHALDEHYDE OXIME' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C6 555 doub 1 n y C1 C2 555 sing 2 n y C1 H1 555 sing 3 n n C2 C3 555 doub 4 n y C2 H2 555 sing 5 n n C3 C4 555 sing 6 n y C3 H3 555 sing 7 n n C4 C5 555 sing 8 n y C4 C10 555 doub 9 n y C5 C6 555 sing 10 n y C5 C7 555 doub 11 n y C6 H6 555 sing 12 n n C7 C17 555 sing 13 n n C7 C8 555 sing 14 n y C8 C9 555 doub 15 n y C8 H8 555 sing 16 n n C9 C10 555 sing 17 n y C9 H9 555 sing 18 n n C10 C11 555 sing 19 n y C11 C16 555 doub 20 n y C11 C12 555 sing 21 n y C12 C13 555 doub 22 n y C12 H12 555 sing 23 n n C13 C14 555 sing 24 n y C13 H13 555 sing 25 n n C14 C15 555 doub 26 n y C14 O1 555 sing 27 n n C15 C16 555 sing 28 n y C15 H15 555 sing 29 n n C16 H16 555 sing 30 n n O1 HO1 555 sing 31 n n C17 N1 555 doub 32 e n C17 H17 555 sing 33 n n N1 O2 555 sing 34 n n O2 HO2 555 sing 35 n n # _atom_sites.entry_id 2NV7 _atom_sites.fract_transf_matrix[1][1] 0.019183 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011277 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009954 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 555 A 1 501 201 555 555 . F 3 555 B 1 501 202 555 555 . G 4 HOH A 1 1 1 HOH HOH . G 4 HOH A 2 2 2 HOH HOH . G 4 HOH A 3 4 4 HOH HOH . G 4 HOH A 4 5 5 HOH HOH . G 4 HOH A 5 7 7 HOH HOH . G 4 HOH A 6 9 9 HOH HOH . G 4 HOH A 7 10 10 HOH HOH . G 4 HOH A 8 14 14 HOH HOH . G 4 HOH A 9 17 17 HOH HOH . G 4 HOH A 10 18 18 HOH HOH . G 4 HOH A 11 19 19 HOH HOH . G 4 HOH A 12 23 23 HOH HOH . G 4 HOH A 13 26 26 HOH HOH . G 4 HOH A 14 27 27 HOH HOH . G 4 HOH A 15 28 28 HOH HOH . G 4 HOH A 16 31 31 HOH HOH . G 4 HOH A 17 32 32 HOH HOH . G 4 HOH A 18 35 35 HOH HOH . G 4 HOH A 19 36 36 HOH HOH . G 4 HOH A 20 39 39 HOH HOH . G 4 HOH A 21 41 41 HOH HOH . G 4 HOH A 22 42 42 HOH HOH . G 4 HOH A 23 44 44 HOH HOH . G 4 HOH A 24 48 48 HOH HOH . G 4 HOH A 25 49 49 HOH HOH . G 4 HOH A 26 51 51 HOH HOH . G 4 HOH A 27 52 52 HOH HOH . G 4 HOH A 28 54 54 HOH HOH . G 4 HOH A 29 57 57 HOH HOH . G 4 HOH A 30 59 59 HOH HOH . G 4 HOH A 31 60 60 HOH HOH . G 4 HOH A 32 61 61 HOH HOH . G 4 HOH A 33 62 62 HOH HOH . G 4 HOH A 34 64 64 HOH HOH . G 4 HOH A 35 65 65 HOH HOH . G 4 HOH A 36 66 66 HOH HOH . G 4 HOH A 37 67 67 HOH HOH . G 4 HOH A 38 68 68 HOH HOH . G 4 HOH A 39 71 71 HOH HOH . G 4 HOH A 40 75 75 HOH HOH . G 4 HOH A 41 76 76 HOH HOH . G 4 HOH A 42 77 77 HOH HOH . G 4 HOH A 43 81 81 HOH HOH . G 4 HOH A 44 82 82 HOH HOH . G 4 HOH A 45 85 85 HOH HOH . G 4 HOH A 46 89 89 HOH HOH . G 4 HOH A 47 90 90 HOH HOH . G 4 HOH A 48 91 91 HOH HOH . G 4 HOH A 49 92 92 HOH HOH . G 4 HOH A 50 93 93 HOH HOH . G 4 HOH A 51 94 94 HOH HOH . G 4 HOH A 52 96 96 HOH HOH . G 4 HOH A 53 98 98 HOH HOH . G 4 HOH A 54 99 99 HOH HOH . G 4 HOH A 55 100 100 HOH HOH . G 4 HOH A 56 101 101 HOH HOH . G 4 HOH A 57 102 102 HOH HOH . G 4 HOH A 58 103 103 HOH HOH . G 4 HOH A 59 104 104 HOH HOH . G 4 HOH A 60 106 106 HOH HOH . G 4 HOH A 61 108 108 HOH HOH . G 4 HOH A 62 109 109 HOH HOH . G 4 HOH A 63 112 112 HOH HOH . G 4 HOH A 64 115 115 HOH HOH . G 4 HOH A 65 116 116 HOH HOH . G 4 HOH A 66 117 117 HOH HOH . G 4 HOH A 67 118 118 HOH HOH . G 4 HOH A 68 119 119 HOH HOH . G 4 HOH A 69 120 120 HOH HOH . G 4 HOH A 70 121 121 HOH HOH . G 4 HOH A 71 122 122 HOH HOH . G 4 HOH A 72 125 125 HOH HOH . G 4 HOH A 73 127 127 HOH HOH . G 4 HOH A 74 128 128 HOH HOH . G 4 HOH A 75 129 129 HOH HOH . G 4 HOH A 76 130 130 HOH HOH . G 4 HOH A 77 132 132 HOH HOH . G 4 HOH A 78 133 133 HOH HOH . G 4 HOH A 79 134 134 HOH HOH . G 4 HOH A 80 137 137 HOH HOH . G 4 HOH A 81 139 139 HOH HOH . G 4 HOH A 82 141 141 HOH HOH . G 4 HOH A 83 145 145 HOH HOH . G 4 HOH A 84 146 146 HOH HOH . G 4 HOH A 85 147 147 HOH HOH . G 4 HOH A 86 148 148 HOH HOH . G 4 HOH A 87 149 149 HOH HOH . G 4 HOH A 88 151 151 HOH HOH . G 4 HOH A 89 152 152 HOH HOH . G 4 HOH A 90 153 153 HOH HOH . G 4 HOH A 91 156 156 HOH HOH . G 4 HOH A 92 157 157 HOH HOH . G 4 HOH A 93 158 158 HOH HOH . G 4 HOH A 94 164 164 HOH HOH . G 4 HOH A 95 165 165 HOH HOH . G 4 HOH A 96 166 166 HOH HOH . G 4 HOH A 97 167 167 HOH HOH . G 4 HOH A 98 168 168 HOH HOH . G 4 HOH A 99 169 169 HOH HOH . G 4 HOH A 100 172 172 HOH HOH . G 4 HOH A 101 177 177 HOH HOH . G 4 HOH A 102 178 178 HOH HOH . G 4 HOH A 103 181 181 HOH HOH . G 4 HOH A 104 182 182 HOH HOH . G 4 HOH A 105 183 183 HOH HOH . G 4 HOH A 106 189 189 HOH HOH . G 4 HOH A 107 191 191 HOH HOH . G 4 HOH A 108 192 192 HOH HOH . G 4 HOH A 109 193 193 HOH HOH . G 4 HOH A 110 196 196 HOH HOH . G 4 HOH A 111 197 197 HOH HOH . G 4 HOH A 112 198 198 HOH HOH . G 4 HOH A 113 199 199 HOH HOH . G 4 HOH A 114 200 200 HOH HOH . G 4 HOH A 115 201 201 HOH HOH . G 4 HOH A 116 202 202 HOH HOH . G 4 HOH A 117 205 205 HOH HOH . G 4 HOH A 118 206 206 HOH HOH . G 4 HOH A 119 207 207 HOH HOH . G 4 HOH A 120 208 208 HOH HOH . G 4 HOH A 121 209 209 HOH HOH . G 4 HOH A 122 211 211 HOH HOH . G 4 HOH A 123 212 212 HOH HOH . G 4 HOH A 124 215 215 HOH HOH . G 4 HOH A 125 217 217 HOH HOH . G 4 HOH A 126 221 221 HOH HOH . G 4 HOH A 127 222 222 HOH HOH . G 4 HOH A 128 224 224 HOH HOH . G 4 HOH A 129 226 226 HOH HOH . G 4 HOH A 130 227 227 HOH HOH . G 4 HOH A 131 228 228 HOH HOH . G 4 HOH A 132 229 229 HOH HOH . G 4 HOH A 133 230 230 HOH HOH . G 4 HOH A 134 232 232 HOH HOH . G 4 HOH A 135 233 233 HOH HOH . G 4 HOH A 136 234 234 HOH HOH . G 4 HOH A 137 237 237 HOH HOH . G 4 HOH A 138 238 238 HOH HOH . G 4 HOH A 139 239 239 HOH HOH . G 4 HOH A 140 240 240 HOH HOH . G 4 HOH A 141 241 241 HOH HOH . G 4 HOH A 142 243 243 HOH HOH . G 4 HOH A 143 244 244 HOH HOH . G 4 HOH A 144 245 245 HOH HOH . G 4 HOH A 145 246 246 HOH HOH . H 4 HOH B 1 3 3 HOH HOH . H 4 HOH B 2 6 6 HOH HOH . H 4 HOH B 3 8 8 HOH HOH . H 4 HOH B 4 11 11 HOH HOH . H 4 HOH B 5 12 12 HOH HOH . H 4 HOH B 6 13 13 HOH HOH . H 4 HOH B 7 15 15 HOH HOH . H 4 HOH B 8 16 16 HOH HOH . H 4 HOH B 9 20 20 HOH HOH . H 4 HOH B 10 21 21 HOH HOH . H 4 HOH B 11 24 24 HOH HOH . H 4 HOH B 12 25 25 HOH HOH . H 4 HOH B 13 29 29 HOH HOH . H 4 HOH B 14 30 30 HOH HOH . H 4 HOH B 15 33 33 HOH HOH . H 4 HOH B 16 34 34 HOH HOH . H 4 HOH B 17 37 37 HOH HOH . H 4 HOH B 18 38 38 HOH HOH . H 4 HOH B 19 40 40 HOH HOH . H 4 HOH B 20 43 43 HOH HOH . H 4 HOH B 21 45 45 HOH HOH . H 4 HOH B 22 46 46 HOH HOH . H 4 HOH B 23 47 47 HOH HOH . H 4 HOH B 24 50 50 HOH HOH . H 4 HOH B 25 53 53 HOH HOH . H 4 HOH B 26 56 56 HOH HOH . H 4 HOH B 27 58 58 HOH HOH . H 4 HOH B 28 63 63 HOH HOH . H 4 HOH B 29 69 69 HOH HOH . H 4 HOH B 30 70 70 HOH HOH . H 4 HOH B 31 72 72 HOH HOH . H 4 HOH B 32 73 73 HOH HOH . H 4 HOH B 33 74 74 HOH HOH . H 4 HOH B 34 78 78 HOH HOH . H 4 HOH B 35 79 79 HOH HOH . H 4 HOH B 36 80 80 HOH HOH . H 4 HOH B 37 84 84 HOH HOH . H 4 HOH B 38 86 86 HOH HOH . H 4 HOH B 39 88 88 HOH HOH . H 4 HOH B 40 95 95 HOH HOH . H 4 HOH B 41 97 97 HOH HOH . H 4 HOH B 42 105 105 HOH HOH . H 4 HOH B 43 110 110 HOH HOH . H 4 HOH B 44 111 111 HOH HOH . H 4 HOH B 45 113 113 HOH HOH . H 4 HOH B 46 114 114 HOH HOH . H 4 HOH B 47 124 124 HOH HOH . H 4 HOH B 48 126 126 HOH HOH . H 4 HOH B 49 131 131 HOH HOH . H 4 HOH B 50 135 135 HOH HOH . H 4 HOH B 51 136 136 HOH HOH . H 4 HOH B 52 138 138 HOH HOH . H 4 HOH B 53 140 140 HOH HOH . H 4 HOH B 54 142 142 HOH HOH . H 4 HOH B 55 143 143 HOH HOH . H 4 HOH B 56 144 144 HOH HOH . H 4 HOH B 57 150 150 HOH HOH . H 4 HOH B 58 154 154 HOH HOH . H 4 HOH B 59 155 155 HOH HOH . H 4 HOH B 60 159 159 HOH HOH . H 4 HOH B 61 160 160 HOH HOH . H 4 HOH B 62 162 162 HOH HOH . H 4 HOH B 63 163 163 HOH HOH . H 4 HOH B 64 170 170 HOH HOH . H 4 HOH B 65 171 171 HOH HOH . H 4 HOH B 66 174 174 HOH HOH . H 4 HOH B 67 175 175 HOH HOH . H 4 HOH B 68 176 176 HOH HOH . H 4 HOH B 69 179 179 HOH HOH . H 4 HOH B 70 180 180 HOH HOH . H 4 HOH B 71 184 184 HOH HOH . H 4 HOH B 72 185 185 HOH HOH . H 4 HOH B 73 186 186 HOH HOH . H 4 HOH B 74 187 187 HOH HOH . H 4 HOH B 75 188 188 HOH HOH . H 4 HOH B 76 190 190 HOH HOH . H 4 HOH B 77 194 194 HOH HOH . H 4 HOH B 78 195 195 HOH HOH . H 4 HOH B 79 203 203 HOH HOH . H 4 HOH B 80 204 204 HOH HOH . H 4 HOH B 81 210 210 HOH HOH . H 4 HOH B 82 213 213 HOH HOH . H 4 HOH B 83 214 214 HOH HOH . H 4 HOH B 84 216 216 HOH HOH . H 4 HOH B 85 218 218 HOH HOH . H 4 HOH B 86 219 219 HOH HOH . H 4 HOH B 87 220 220 HOH HOH . H 4 HOH B 88 223 223 HOH HOH . H 4 HOH B 89 225 225 HOH HOH . H 4 HOH B 90 231 231 HOH HOH . H 4 HOH B 91 235 235 HOH HOH . H 4 HOH B 92 236 236 HOH HOH . H 4 HOH B 93 242 242 HOH HOH . I 4 HOH C 1 22 22 HOH HOH . I 4 HOH C 2 83 83 HOH HOH . I 4 HOH C 3 87 87 HOH HOH . I 4 HOH C 4 107 107 HOH HOH . J 4 HOH D 1 55 55 HOH HOH . J 4 HOH D 2 123 123 HOH HOH . J 4 HOH D 3 161 161 HOH HOH . J 4 HOH D 4 173 173 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 555 . . . E 3 31.03 39.493 36.775 1 17.34 ? C1 555 501 A 1 HETATM 2 C C2 555 . . . E 3 29.819 39.644 37.449 1 17.75 ? C2 555 501 A 1 HETATM 3 C C3 555 . . . E 3 29.395 38.65 38.329 1 17.2 ? C3 555 501 A 1 HETATM 4 C C4 555 . . . E 3 30.172 37.427 38.594 1 18.51 ? C4 555 501 A 1 HETATM 5 C C5 555 . . . E 3 31.461 37.283 37.873 1 19.11 ? C5 555 501 A 1 HETATM 6 C C6 555 . . . E 3 31.824 38.353 36.979 1 17.78 ? C6 555 501 A 1 HETATM 7 C C7 555 . . . E 3 32.276 36.086 38.107 1 20.9 ? C7 555 501 A 1 HETATM 8 C C8 555 . . . E 3 31.829 35.079 39.011 1 21.04 ? C8 555 501 A 1 HETATM 9 C C9 555 . . . E 3 30.595 35.208 39.685 1 20.43 ? C9 555 501 A 1 HETATM 10 C C10 555 . . . E 3 29.734 36.348 39.515 1 17.48 ? C10 555 501 A 1 HETATM 11 C C11 555 . . . E 3 28.438 36.305 40.322 1 17.45 ? C11 555 501 A 1 HETATM 12 C C12 555 . . . E 3 28.491 36.142 41.751 1 16.39 ? C12 555 501 A 1 HETATM 13 C C13 555 . . . E 3 27.305 36.08 42.517 1 15.55 ? C13 555 501 A 1 HETATM 14 C C14 555 . . . E 3 26.045 36.18 41.878 1 15.26 ? C14 555 501 A 1 HETATM 15 C C15 555 . . . E 3 25.946 36.342 40.478 1 16.33 ? C15 555 501 A 1 HETATM 16 C C16 555 . . . E 3 27.12 36.394 39.703 1 15.64 ? C16 555 501 A 1 HETATM 17 O O1 555 . . . E 3 24.893 36.111 42.591 1 14.17 ? O1 555 501 A 1 HETATM 18 C C17 555 . . . E 3 33.592 35.811 37.43 1 21.46 ? C17 555 501 A 1 HETATM 19 N N1 555 . . . E 3 34.401 36.732 36.995 1 22.65 ? N1 555 501 A 1 HETATM 20 O O2 555 . . . E 3 35.523 36.134 36.408 1 23.06 ? O2 555 501 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 20 #