data_2NVD # _model_server_result.job_id HT5hCuJmKKwk2_HET58Bmg _model_server_result.datetime_utc '2024-12-22 02:29:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2nvd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":600}' # _entry.id 2NVD # _exptl.entry_id 2NVD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 335.289 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(CARBOXYMETHYL)-1-OXO-1,2-DIHYDRONAPHTHO[1,2-D]ISOTHIAZOLE-4-CARBOXYLIC ACID 3,3-DIOXIDE' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.88 _cell.angle_gamma 90 _cell.entry_id 2NVD _cell.length_a 49.39 _cell.length_b 66.64 _cell.length_c 47.14 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2NVD _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # _chem_comp.formula 'C14 H9 N O7 S' _chem_comp.formula_weight 335.289 _chem_comp.id ITB _chem_comp.mon_nstd_flag . _chem_comp.name '2-(CARBOXYMETHYL)-1-OXO-1,2-DIHYDRONAPHTHO[1,2-D]ISOTHIAZOLE-4-CARBOXYLIC ACID 3,3-DIOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '2-CARBOXYMETHYL-1,3,3-TRIOXO-1,2-DIHYDRONAPHTHO[1,2-D]ISOTHIAZOLE-4-CARBOXYLIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 ITB doub 173 n y C1 C10 ITB sing 174 n y C1 C6 ITB sing 175 n y C10 C14 ITB sing 176 n n C10 C9 ITB doub 177 n y C14 O19 ITB doub 178 n n C14 N15 ITB sing 179 n n N15 C20 ITB sing 180 n n N15 S16 ITB sing 181 n n C20 C21 ITB sing 182 n n C20 H201 ITB sing 183 n n C20 H202 ITB sing 184 n n C21 O22 ITB doub 185 n n C21 O23 ITB sing 186 n n O23 HO23 ITB sing 187 n n S16 O18 ITB doub 188 n n S16 O17 ITB doub 189 n n S16 C9 ITB sing 190 n n C9 C8 ITB sing 191 n y C8 C7 ITB doub 192 n y C8 C11 ITB sing 193 n n C11 O13 ITB doub 194 n n C11 O12 ITB sing 195 n n O12 HO12 ITB sing 196 n n C7 C6 ITB sing 197 n y C7 H7 ITB sing 198 n n C6 C5 ITB doub 199 n y C5 C4 ITB sing 200 n y C5 H5 ITB sing 201 n n C4 C3 ITB doub 202 n y C4 H4 ITB sing 203 n n C3 C2 ITB sing 204 n y C3 H3 ITB sing 205 n n C2 H2 ITB sing 206 n n # _atom_sites.entry_id 2NVD _atom_sites.fract_transf_matrix[1][1] 0.020247 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000665 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015006 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021225 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP A 1 500 500 NAP NAP . C 3 ITB A 1 600 600 ITB LIG . D 3 ITB A 1 700 700 ITB LIG . E 3 ITB A 1 800 800 ITB LIG . F 4 HOH A 1 1001 1001 HOH HOH . F 4 HOH A 2 1002 1002 HOH HOH . F 4 HOH A 3 1003 1003 HOH HOH . F 4 HOH A 4 1004 1004 HOH HOH . F 4 HOH A 5 1005 1005 HOH HOH . F 4 HOH A 6 1006 1006 HOH HOH . F 4 HOH A 7 1007 1007 HOH HOH . F 4 HOH A 8 1008 1008 HOH HOH . F 4 HOH A 9 1009 1009 HOH HOH . F 4 HOH A 10 1010 1010 HOH HOH . F 4 HOH A 11 1011 1011 HOH HOH . F 4 HOH A 12 1012 1012 HOH HOH . F 4 HOH A 13 1013 1013 HOH HOH . F 4 HOH A 14 1014 1014 HOH HOH . F 4 HOH A 15 1015 1015 HOH HOH . F 4 HOH A 16 1016 1016 HOH HOH . F 4 HOH A 17 1017 1017 HOH HOH . F 4 HOH A 18 1018 1018 HOH HOH . F 4 HOH A 19 1019 1019 HOH HOH . F 4 HOH A 20 1020 1020 HOH HOH . F 4 HOH A 21 1021 1021 HOH HOH . F 4 HOH A 22 1022 1022 HOH HOH . F 4 HOH A 23 1023 1023 HOH HOH . F 4 HOH A 24 1024 1024 HOH HOH . F 4 HOH A 25 1025 1025 HOH HOH . F 4 HOH A 26 1026 1026 HOH HOH . F 4 HOH A 27 1027 1027 HOH HOH . F 4 HOH A 28 1028 1028 HOH HOH . F 4 HOH A 29 1029 1029 HOH HOH . F 4 HOH A 30 1030 1030 HOH HOH . F 4 HOH A 31 1031 1031 HOH HOH . F 4 HOH A 32 1032 1032 HOH HOH . F 4 HOH A 33 1033 1033 HOH HOH . F 4 HOH A 34 1034 1034 HOH HOH . F 4 HOH A 35 1035 1035 HOH HOH . F 4 HOH A 36 1036 1036 HOH HOH . F 4 HOH A 37 1037 1037 HOH HOH . F 4 HOH A 38 1038 1038 HOH HOH . F 4 HOH A 39 1039 1039 HOH HOH . F 4 HOH A 40 1040 1040 HOH HOH . F 4 HOH A 41 1041 1041 HOH HOH . F 4 HOH A 42 1042 1042 HOH HOH . F 4 HOH A 43 1043 1043 HOH HOH . F 4 HOH A 44 1044 1044 HOH HOH . F 4 HOH A 45 1045 1045 HOH HOH . F 4 HOH A 46 1046 1046 HOH HOH . F 4 HOH A 47 1047 1047 HOH HOH . F 4 HOH A 48 1048 1048 HOH HOH . F 4 HOH A 49 1049 1049 HOH HOH . F 4 HOH A 50 1050 1050 HOH HOH . F 4 HOH A 51 1051 1051 HOH HOH . F 4 HOH A 52 1052 1052 HOH HOH . F 4 HOH A 53 1053 1053 HOH HOH . F 4 HOH A 54 1054 1054 HOH HOH . F 4 HOH A 55 1055 1055 HOH HOH . F 4 HOH A 56 1056 1056 HOH HOH . F 4 HOH A 57 1057 1057 HOH HOH . F 4 HOH A 58 1058 1058 HOH HOH . F 4 HOH A 59 1059 1059 HOH HOH . F 4 HOH A 60 1060 1060 HOH HOH . F 4 HOH A 61 1061 1061 HOH HOH . F 4 HOH A 62 1062 1062 HOH HOH . F 4 HOH A 63 1063 1063 HOH HOH . F 4 HOH A 64 1064 1064 HOH HOH . F 4 HOH A 65 1065 1065 HOH HOH . F 4 HOH A 66 1066 1066 HOH HOH . F 4 HOH A 67 1067 1067 HOH HOH . F 4 HOH A 68 1068 1068 HOH HOH . F 4 HOH A 69 1069 1069 HOH HOH . F 4 HOH A 70 1070 1070 HOH HOH . F 4 HOH A 71 1071 1071 HOH HOH . F 4 HOH A 72 1072 1072 HOH HOH . F 4 HOH A 73 1073 1073 HOH HOH . F 4 HOH A 74 1074 1074 HOH HOH . F 4 HOH A 75 1075 1075 HOH HOH . F 4 HOH A 76 1076 1076 HOH HOH . F 4 HOH A 77 1077 1077 HOH HOH . F 4 HOH A 78 1078 1078 HOH HOH . F 4 HOH A 79 1080 1080 HOH HOH . F 4 HOH A 80 1081 1081 HOH HOH . F 4 HOH A 81 1082 1082 HOH HOH . F 4 HOH A 82 1083 1083 HOH HOH . F 4 HOH A 83 1084 1084 HOH HOH . F 4 HOH A 84 1085 1085 HOH HOH . F 4 HOH A 85 1086 1086 HOH HOH . F 4 HOH A 86 1087 1087 HOH HOH . F 4 HOH A 87 1088 1088 HOH HOH . F 4 HOH A 88 1089 1089 HOH HOH . F 4 HOH A 89 1090 1090 HOH HOH . F 4 HOH A 90 1091 1091 HOH HOH . F 4 HOH A 91 1092 1092 HOH HOH . F 4 HOH A 92 1093 1093 HOH HOH . F 4 HOH A 93 1094 1094 HOH HOH . F 4 HOH A 94 1095 1095 HOH HOH . F 4 HOH A 95 1097 1097 HOH HOH . F 4 HOH A 96 1099 1099 HOH HOH . F 4 HOH A 97 1100 1100 HOH HOH . F 4 HOH A 98 1101 1101 HOH HOH . F 4 HOH A 99 1102 1102 HOH HOH . F 4 HOH A 100 1103 1103 HOH HOH . F 4 HOH A 101 1104 1104 HOH HOH . F 4 HOH A 102 1105 1105 HOH HOH . F 4 HOH A 103 1106 1106 HOH HOH . F 4 HOH A 104 1107 1107 HOH HOH . F 4 HOH A 105 1108 1108 HOH HOH . F 4 HOH A 106 1109 1109 HOH HOH . F 4 HOH A 107 1110 1110 HOH HOH . F 4 HOH A 108 1111 1111 HOH HOH . F 4 HOH A 109 1113 1113 HOH HOH . F 4 HOH A 110 1114 1114 HOH HOH . F 4 HOH A 111 1115 1115 HOH HOH . F 4 HOH A 112 1116 1116 HOH HOH . F 4 HOH A 113 1117 1117 HOH HOH . F 4 HOH A 114 1118 1118 HOH HOH . F 4 HOH A 115 1121 1121 HOH HOH . F 4 HOH A 116 1122 1122 HOH HOH . F 4 HOH A 117 1123 1123 HOH HOH . F 4 HOH A 118 1124 1124 HOH HOH . F 4 HOH A 119 1125 1125 HOH HOH . F 4 HOH A 120 1126 1126 HOH HOH . F 4 HOH A 121 1127 1127 HOH HOH . F 4 HOH A 122 1128 1128 HOH HOH . F 4 HOH A 123 1129 1129 HOH HOH . F 4 HOH A 124 1130 1130 HOH HOH . F 4 HOH A 125 1131 1131 HOH HOH . F 4 HOH A 126 1132 1132 HOH HOH . F 4 HOH A 127 1133 1133 HOH HOH . F 4 HOH A 128 1134 1134 HOH HOH . F 4 HOH A 129 1135 1135 HOH HOH . F 4 HOH A 130 1136 1136 HOH HOH . F 4 HOH A 131 1137 1137 HOH HOH . F 4 HOH A 132 1138 1138 HOH HOH . F 4 HOH A 133 1139 1139 HOH HOH . F 4 HOH A 134 1140 1140 HOH HOH . F 4 HOH A 135 1141 1141 HOH HOH . F 4 HOH A 136 1142 1142 HOH HOH . F 4 HOH A 137 1143 1143 HOH HOH . F 4 HOH A 138 1144 1144 HOH HOH . F 4 HOH A 139 1145 1145 HOH HOH . F 4 HOH A 140 1146 1146 HOH HOH . F 4 HOH A 141 1147 1147 HOH HOH . F 4 HOH A 142 1148 1148 HOH HOH . F 4 HOH A 143 1149 1149 HOH HOH . F 4 HOH A 144 1150 1150 HOH HOH . F 4 HOH A 145 1151 1151 HOH HOH . F 4 HOH A 146 1152 1152 HOH HOH . F 4 HOH A 147 1153 1153 HOH HOH . F 4 HOH A 148 1154 1154 HOH HOH . F 4 HOH A 149 1155 1155 HOH HOH . F 4 HOH A 150 1156 1156 HOH HOH . F 4 HOH A 151 1157 1157 HOH HOH . F 4 HOH A 152 1158 1158 HOH HOH . F 4 HOH A 153 1160 1160 HOH HOH . F 4 HOH A 154 1161 1161 HOH HOH . F 4 HOH A 155 1162 1162 HOH HOH . F 4 HOH A 156 1163 1163 HOH HOH . F 4 HOH A 157 1164 1164 HOH HOH . F 4 HOH A 158 1165 1165 HOH HOH . F 4 HOH A 159 1166 1166 HOH HOH . F 4 HOH A 160 1168 1168 HOH HOH . F 4 HOH A 161 1169 1169 HOH HOH . F 4 HOH A 162 1170 1170 HOH HOH . F 4 HOH A 163 1171 1171 HOH HOH . F 4 HOH A 164 1172 1172 HOH HOH . F 4 HOH A 165 1173 1173 HOH HOH . F 4 HOH A 166 1174 1174 HOH HOH . F 4 HOH A 167 1175 1175 HOH HOH . F 4 HOH A 168 1176 1176 HOH HOH . F 4 HOH A 169 1177 1177 HOH HOH . F 4 HOH A 170 1179 1179 HOH HOH . F 4 HOH A 171 1180 1180 HOH HOH . F 4 HOH A 172 1181 1181 HOH HOH . F 4 HOH A 173 1182 1182 HOH HOH . F 4 HOH A 174 1183 1183 HOH HOH . F 4 HOH A 175 1184 1184 HOH HOH . F 4 HOH A 176 1185 1185 HOH HOH . F 4 HOH A 177 1186 1186 HOH HOH . F 4 HOH A 178 1187 1187 HOH HOH . F 4 HOH A 179 1189 1189 HOH HOH . F 4 HOH A 180 1191 1191 HOH HOH . F 4 HOH A 181 1193 1193 HOH HOH . F 4 HOH A 182 1194 1194 HOH HOH . F 4 HOH A 183 1195 1195 HOH HOH . F 4 HOH A 184 1196 1196 HOH HOH . F 4 HOH A 185 1198 1198 HOH HOH . F 4 HOH A 186 1199 1199 HOH HOH . F 4 HOH A 187 1200 1200 HOH HOH . F 4 HOH A 188 1201 1201 HOH HOH . F 4 HOH A 189 1202 1202 HOH HOH . F 4 HOH A 190 1203 1203 HOH HOH . F 4 HOH A 191 1206 1206 HOH HOH . F 4 HOH A 192 1208 1208 HOH HOH . F 4 HOH A 193 1209 1209 HOH HOH . F 4 HOH A 194 1210 1210 HOH HOH . F 4 HOH A 195 1212 1212 HOH HOH . F 4 HOH A 196 1213 1213 HOH HOH . F 4 HOH A 197 1214 1214 HOH HOH . F 4 HOH A 198 1215 1215 HOH HOH . F 4 HOH A 199 1216 1216 HOH HOH . F 4 HOH A 200 1217 1217 HOH HOH . F 4 HOH A 201 1218 1218 HOH HOH . F 4 HOH A 202 1219 1219 HOH HOH . F 4 HOH A 203 1220 1220 HOH HOH . F 4 HOH A 204 1222 1222 HOH HOH . F 4 HOH A 205 1223 1223 HOH HOH . F 4 HOH A 206 1224 1224 HOH HOH . F 4 HOH A 207 1226 1226 HOH HOH . F 4 HOH A 208 1227 1227 HOH HOH . F 4 HOH A 209 1228 1228 HOH HOH . F 4 HOH A 210 1232 1232 HOH HOH . F 4 HOH A 211 1233 1233 HOH HOH . F 4 HOH A 212 1234 1234 HOH HOH . F 4 HOH A 213 1237 1237 HOH HOH . F 4 HOH A 214 1240 1240 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 ITB . . . C 3 19.841 -7.606 17.807 1 15.4 ? C1 ITB 600 A 1 HETATM 2 C C10 ITB . . . C 3 18.564 -7.792 17.289 1 13.38 ? C10 ITB 600 A 1 HETATM 3 C C14 ITB . . . C 3 18.152 -8.494 16.021 1 20.42 ? C14 ITB 600 A 1 HETATM 4 O O19 ITB . . . C 3 19.052 -8.892 15.277 1 30.04 ? O19 ITB 600 A 1 HETATM 5 N N15 ITB . . . C 3 16.821 -8.445 15.83 1 19.08 ? N15 ITB 600 A 1 HETATM 6 C C20 ITB . . . C 3 16.229 -9.632 15.215 1 25.55 ? C20 ITB 600 A 1 HETATM 7 C C21 ITB . . . C 3 16.304 -10.967 15.877 1 28.97 ? C21 ITB 600 A 1 HETATM 8 O O23 ITB . . . C 3 16.783 -11.132 17.117 1 30.9 ? O23 ITB 600 A 1 HETATM 9 O O22 ITB . . . C 3 15.914 -11.99 15.28 1 32.82 ? O22 ITB 600 A 1 HETATM 10 S S16 ITB . . . C 3 15.955 -7.804 16.928 1 15.23 ? S16 ITB 600 A 1 HETATM 11 O O18 ITB . . . C 3 15.392 -6.587 16.358 1 16.13 ? O18 ITB 600 A 1 HETATM 12 O O17 ITB . . . C 3 15.097 -8.727 17.639 1 18.17 ? O17 ITB 600 A 1 HETATM 13 C C9 ITB . . . C 3 17.386 -7.395 17.888 1 13.05 ? C9 ITB 600 A 1 HETATM 14 C C8 ITB . . . C 3 17.413 -6.758 19.117 1 11.13 ? C8 ITB 600 A 1 HETATM 15 C C11 ITB . . . C 3 16.23 -6.239 19.881 1 11.93 ? C11 ITB 600 A 1 HETATM 16 O O13 ITB . . . C 3 15.22 -5.952 19.052 1 11.18 ? O13 ITB 600 A 1 HETATM 17 O O12 ITB . . . C 3 16.087 -6.043 21.062 1 12.08 ? O12 ITB 600 A 1 HETATM 18 C C7 ITB . . . C 3 18.7 -6.617 19.579 1 13.39 ? C7 ITB 600 A 1 HETATM 19 C C6 ITB . . . C 3 19.915 -6.954 19.053 1 13.36 ? C6 ITB 600 A 1 HETATM 20 C C5 ITB . . . C 3 21.104 -6.673 19.752 1 14.65 ? C5 ITB 600 A 1 HETATM 21 C C4 ITB . . . C 3 22.268 -7.08 19.108 1 18.45 ? C4 ITB 600 A 1 HETATM 22 C C3 ITB . . . C 3 22.229 -7.732 17.863 1 18.5 ? C3 ITB 600 A 1 HETATM 23 C C2 ITB . . . C 3 21.023 -7.999 17.212 1 16.4 ? C2 ITB 600 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 395 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 23 #