data_2NX8 # _model_server_result.job_id QBTfJzg_J-jy2Ykhh9jRnw _model_server_result.datetime_utc '2024-11-25 10:18:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2nx8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2055}' # _entry.id 2NX8 # _exptl.entry_id 2NX8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2NX8 _cell.length_a 80.091 _cell.length_b 80.091 _cell.length_c 81.104 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2NX8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 65 A HIS 65 1_555 B ZN ZN . A ZN 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc2 A SG CYS 95 A CYS 95 1_555 B ZN ZN . A ZN 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc3 A SG CYS 98 A CYS 98 1_555 B ZN ZN . A ZN 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 2NX8 _atom_sites.fract_transf_matrix[1][1] 0.012486 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012486 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01233 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 999 999 ZN ZN . C 3 PO4 A 1 2055 2055 PO4 PO4 . D 4 HOH A 1 2056 1 HOH TIP . D 4 HOH A 2 2057 2 HOH TIP . D 4 HOH A 3 2058 3 HOH TIP . D 4 HOH A 4 2059 4 HOH TIP . D 4 HOH A 5 2060 5 HOH TIP . D 4 HOH A 6 2061 6 HOH TIP . D 4 HOH A 7 2062 7 HOH TIP . D 4 HOH A 8 2063 8 HOH TIP . D 4 HOH A 9 2064 9 HOH TIP . D 4 HOH A 10 2065 10 HOH TIP . D 4 HOH A 11 2066 11 HOH TIP . D 4 HOH A 12 2067 13 HOH TIP . D 4 HOH A 13 2068 16 HOH TIP . D 4 HOH A 14 2069 17 HOH TIP . D 4 HOH A 15 2070 18 HOH TIP . D 4 HOH A 16 2071 19 HOH TIP . D 4 HOH A 17 2072 20 HOH TIP . D 4 HOH A 18 2073 21 HOH TIP . D 4 HOH A 19 2074 22 HOH TIP . D 4 HOH A 20 2075 23 HOH TIP . D 4 HOH A 21 2076 24 HOH TIP . D 4 HOH A 22 2077 26 HOH TIP . D 4 HOH A 23 2078 27 HOH TIP . D 4 HOH A 24 2079 28 HOH TIP . D 4 HOH A 25 2080 29 HOH TIP . D 4 HOH A 26 2081 30 HOH TIP . D 4 HOH A 27 2082 31 HOH TIP . D 4 HOH A 28 2083 32 HOH TIP . D 4 HOH A 29 2084 33 HOH TIP . D 4 HOH A 30 2085 34 HOH TIP . D 4 HOH A 31 2086 35 HOH TIP . D 4 HOH A 32 2087 36 HOH TIP . D 4 HOH A 33 2088 38 HOH TIP . D 4 HOH A 34 2089 39 HOH TIP . D 4 HOH A 35 2090 40 HOH TIP . D 4 HOH A 36 2091 41 HOH TIP . D 4 HOH A 37 2092 42 HOH TIP . D 4 HOH A 38 2093 43 HOH TIP . D 4 HOH A 39 2094 44 HOH TIP . D 4 HOH A 40 2095 45 HOH TIP . D 4 HOH A 41 2096 46 HOH TIP . D 4 HOH A 42 2097 47 HOH TIP . D 4 HOH A 43 2098 48 HOH TIP . D 4 HOH A 44 2099 49 HOH TIP . D 4 HOH A 45 2100 50 HOH TIP . D 4 HOH A 46 2101 51 HOH TIP . D 4 HOH A 47 2102 52 HOH TIP . D 4 HOH A 48 2103 53 HOH TIP . D 4 HOH A 49 2104 55 HOH TIP . D 4 HOH A 50 2105 56 HOH TIP . D 4 HOH A 51 2106 57 HOH TIP . D 4 HOH A 52 2107 58 HOH TIP . D 4 HOH A 53 2108 59 HOH TIP . D 4 HOH A 54 2109 60 HOH TIP . D 4 HOH A 55 2110 61 HOH TIP . D 4 HOH A 56 2111 62 HOH TIP . D 4 HOH A 57 2112 63 HOH TIP . D 4 HOH A 58 2113 64 HOH TIP . D 4 HOH A 59 2114 65 HOH TIP . D 4 HOH A 60 2115 66 HOH TIP . D 4 HOH A 61 2116 67 HOH TIP . D 4 HOH A 62 2117 68 HOH TIP . D 4 HOH A 63 2118 69 HOH TIP . D 4 HOH A 64 2119 70 HOH TIP . D 4 HOH A 65 2120 71 HOH TIP . D 4 HOH A 66 2121 72 HOH TIP . D 4 HOH A 67 2122 73 HOH TIP . D 4 HOH A 68 2123 74 HOH TIP . D 4 HOH A 69 2124 75 HOH TIP . D 4 HOH A 70 2125 76 HOH TIP . D 4 HOH A 71 2126 77 HOH TIP . D 4 HOH A 72 2127 78 HOH TIP . D 4 HOH A 73 2128 79 HOH TIP . D 4 HOH A 74 2129 80 HOH TIP . D 4 HOH A 75 2130 81 HOH TIP . D 4 HOH A 76 2131 82 HOH TIP . D 4 HOH A 77 2132 83 HOH TIP . D 4 HOH A 78 2133 84 HOH TIP . D 4 HOH A 79 2134 85 HOH TIP . D 4 HOH A 80 2135 86 HOH TIP . D 4 HOH A 81 2136 87 HOH TIP . D 4 HOH A 82 2137 88 HOH TIP . D 4 HOH A 83 2138 89 HOH TIP . D 4 HOH A 84 2139 91 HOH TIP . D 4 HOH A 85 2140 92 HOH TIP . D 4 HOH A 86 2141 93 HOH TIP . D 4 HOH A 87 2142 94 HOH TIP . D 4 HOH A 88 2143 96 HOH TIP . D 4 HOH A 89 2144 97 HOH TIP . D 4 HOH A 90 2145 98 HOH TIP . D 4 HOH A 91 2146 99 HOH TIP . D 4 HOH A 92 2147 100 HOH TIP . D 4 HOH A 93 2148 101 HOH TIP . D 4 HOH A 94 2149 102 HOH TIP . D 4 HOH A 95 2150 103 HOH TIP . D 4 HOH A 96 2151 104 HOH TIP . D 4 HOH A 97 2152 106 HOH TIP . D 4 HOH A 98 2153 107 HOH TIP . D 4 HOH A 99 2154 108 HOH TIP . D 4 HOH A 100 2155 109 HOH TIP . D 4 HOH A 101 2156 110 HOH TIP . D 4 HOH A 102 2157 111 HOH TIP . D 4 HOH A 103 2158 112 HOH TIP . D 4 HOH A 104 2159 113 HOH TIP . D 4 HOH A 105 2160 114 HOH TIP . D 4 HOH A 106 2161 115 HOH TIP . D 4 HOH A 107 2162 116 HOH TIP . D 4 HOH A 108 2163 117 HOH TIP . D 4 HOH A 109 2164 118 HOH TIP . D 4 HOH A 110 2165 119 HOH TIP . D 4 HOH A 111 2166 120 HOH TIP . D 4 HOH A 112 2167 121 HOH TIP . D 4 HOH A 113 2168 122 HOH TIP . D 4 HOH A 114 2169 123 HOH TIP . D 4 HOH A 115 2170 124 HOH TIP . D 4 HOH A 116 2171 125 HOH TIP . D 4 HOH A 117 2172 126 HOH TIP . D 4 HOH A 118 2173 127 HOH TIP . D 4 HOH A 119 2174 128 HOH TIP . D 4 HOH A 120 2175 129 HOH TIP . D 4 HOH A 121 2176 130 HOH TIP . D 4 HOH A 122 2177 131 HOH TIP . D 4 HOH A 123 2178 132 HOH TIP . D 4 HOH A 124 2179 133 HOH TIP . D 4 HOH A 125 2180 134 HOH TIP . D 4 HOH A 126 2181 135 HOH TIP . D 4 HOH A 127 2182 136 HOH TIP . D 4 HOH A 128 2183 137 HOH TIP . D 4 HOH A 129 2184 138 HOH TIP . D 4 HOH A 130 2185 139 HOH TIP . D 4 HOH A 131 2186 140 HOH TIP . D 4 HOH A 132 2187 141 HOH TIP . D 4 HOH A 133 2188 142 HOH TIP . D 4 HOH A 134 2189 143 HOH TIP . D 4 HOH A 135 2190 144 HOH TIP . D 4 HOH A 136 2191 145 HOH TIP . D 4 HOH A 137 2192 146 HOH TIP . D 4 HOH A 138 2193 147 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . C 3 12.119 21.306 -10.666 1 59.86 ? P PO4 2055 A 1 HETATM 2 O O1 PO4 . . . C 3 12.198 19.646 -10.056 1 58.57 ? O1 PO4 2055 A 1 HETATM 3 O O2 PO4 . . . C 3 13.394 21.885 -10.268 1 58.42 ? O2 PO4 2055 A 1 HETATM 4 O O3 PO4 . . . C 3 10.97 21.949 -9.978 1 61.52 ? O3 PO4 2055 A 1 HETATM 5 O O4 PO4 . . . C 3 11.843 21.259 -12.106 1 60.22 ? O4 PO4 2055 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 447 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #