data_2NZ2 # _model_server_result.job_id Ld_EwhaklbqCOqEVa-sZ3g _model_server_result.datetime_utc '2024-11-26 22:41:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2nz2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 2NZ2 # _exptl.entry_id 2NZ2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 133.103 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ASPARTIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2NZ2 _cell.length_a 95.94 _cell.length_b 117.47 _cell.length_c 155.15 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2NZ2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 22 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 2 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 x,-y+1/2,-z+1/2 1 0 0 0 -1 0 0 0 -1 0 58.735 77.575 3 'crystal symmetry operation' 11_555 -x+1/2,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 47.97 0 77.575 4 'crystal symmetry operation' 14_555 -x+1/2,-y+1/2,z -1 0 0 0 -1 0 0 0 1 47.97 58.735 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H7 N O4' _chem_comp.formula_weight 133.103 _chem_comp.id ASP _chem_comp.mon_nstd_flag y _chem_comp.name 'ASPARTIC ACID' _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA ASP sing 55 n n N H ASP sing 56 n n N H2 ASP sing 57 n n CA C ASP sing 58 n n CA CB ASP sing 59 n n CA HA ASP sing 60 n n C O ASP doub 61 n n C OXT ASP sing 62 n n CB CG ASP sing 63 n n CB HB2 ASP sing 64 n n CB HB3 ASP sing 65 n n CG OD1 ASP doub 66 n n CG OD2 ASP sing 67 n n OD2 HD2 ASP sing 68 n n OXT HXT ASP sing 69 n n # _atom_sites.entry_id 2NZ2 _atom_sites.fract_transf_matrix[1][1] 0.010423 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008513 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006445 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 503 503 NA NA . C 3 ASP A 1 501 501 ASP ASP . D 4 CIR A 1 502 502 CIR CIR . E 5 HOH A 1 504 1 HOH HOH . E 5 HOH A 2 505 2 HOH HOH . E 5 HOH A 3 506 3 HOH HOH . E 5 HOH A 4 507 4 HOH HOH . E 5 HOH A 5 508 5 HOH HOH . E 5 HOH A 6 509 6 HOH HOH . E 5 HOH A 7 510 7 HOH HOH . E 5 HOH A 8 511 8 HOH HOH . E 5 HOH A 9 512 9 HOH HOH . E 5 HOH A 10 513 10 HOH HOH . E 5 HOH A 11 514 11 HOH HOH . E 5 HOH A 12 515 12 HOH HOH . E 5 HOH A 13 516 13 HOH HOH . E 5 HOH A 14 517 14 HOH HOH . E 5 HOH A 15 518 15 HOH HOH . E 5 HOH A 16 519 16 HOH HOH . E 5 HOH A 17 520 17 HOH HOH . E 5 HOH A 18 521 18 HOH HOH . E 5 HOH A 19 522 19 HOH HOH . E 5 HOH A 20 523 20 HOH HOH . E 5 HOH A 21 524 21 HOH HOH . E 5 HOH A 22 525 22 HOH HOH . E 5 HOH A 23 526 23 HOH HOH . E 5 HOH A 24 527 24 HOH HOH . E 5 HOH A 25 528 25 HOH HOH . E 5 HOH A 26 529 26 HOH HOH . E 5 HOH A 27 530 27 HOH HOH . E 5 HOH A 28 531 28 HOH HOH . E 5 HOH A 29 532 29 HOH HOH . E 5 HOH A 30 533 30 HOH HOH . E 5 HOH A 31 534 31 HOH HOH . E 5 HOH A 32 535 32 HOH HOH . E 5 HOH A 33 536 33 HOH HOH . E 5 HOH A 34 537 34 HOH HOH . E 5 HOH A 35 538 35 HOH HOH . E 5 HOH A 36 539 36 HOH HOH . E 5 HOH A 37 540 37 HOH HOH . E 5 HOH A 38 541 38 HOH HOH . E 5 HOH A 39 542 39 HOH HOH . E 5 HOH A 40 543 40 HOH HOH . E 5 HOH A 41 544 41 HOH HOH . E 5 HOH A 42 545 42 HOH HOH . E 5 HOH A 43 546 43 HOH HOH . E 5 HOH A 44 547 44 HOH HOH . E 5 HOH A 45 548 45 HOH HOH . E 5 HOH A 46 549 46 HOH HOH . E 5 HOH A 47 550 47 HOH HOH . E 5 HOH A 48 551 48 HOH HOH . E 5 HOH A 49 552 49 HOH HOH . E 5 HOH A 50 553 50 HOH HOH . E 5 HOH A 51 554 51 HOH HOH . E 5 HOH A 52 555 52 HOH HOH . E 5 HOH A 53 556 53 HOH HOH . E 5 HOH A 54 557 54 HOH HOH . E 5 HOH A 55 558 55 HOH HOH . E 5 HOH A 56 559 56 HOH HOH . E 5 HOH A 57 560 57 HOH HOH . E 5 HOH A 58 561 58 HOH HOH . E 5 HOH A 59 562 59 HOH HOH . E 5 HOH A 60 563 60 HOH HOH . E 5 HOH A 61 564 61 HOH HOH . E 5 HOH A 62 565 62 HOH HOH . E 5 HOH A 63 566 63 HOH HOH . E 5 HOH A 64 567 64 HOH HOH . E 5 HOH A 65 568 65 HOH HOH . E 5 HOH A 66 569 66 HOH HOH . E 5 HOH A 67 570 67 HOH HOH . E 5 HOH A 68 571 68 HOH HOH . E 5 HOH A 69 572 69 HOH HOH . E 5 HOH A 70 573 70 HOH HOH . E 5 HOH A 71 574 71 HOH HOH . E 5 HOH A 72 575 72 HOH HOH . E 5 HOH A 73 576 73 HOH HOH . E 5 HOH A 74 577 74 HOH HOH . E 5 HOH A 75 578 75 HOH HOH . E 5 HOH A 76 579 76 HOH HOH . E 5 HOH A 77 580 77 HOH HOH . E 5 HOH A 78 581 78 HOH HOH . E 5 HOH A 79 582 79 HOH HOH . E 5 HOH A 80 583 80 HOH HOH . E 5 HOH A 81 584 81 HOH HOH . E 5 HOH A 82 585 82 HOH HOH . E 5 HOH A 83 586 83 HOH HOH . E 5 HOH A 84 587 84 HOH HOH . E 5 HOH A 85 588 85 HOH HOH . E 5 HOH A 86 589 86 HOH HOH . E 5 HOH A 87 590 87 HOH HOH . E 5 HOH A 88 591 88 HOH HOH . E 5 HOH A 89 592 89 HOH HOH . E 5 HOH A 90 593 90 HOH HOH . E 5 HOH A 91 594 91 HOH HOH . E 5 HOH A 92 595 92 HOH HOH . E 5 HOH A 93 596 93 HOH HOH . E 5 HOH A 94 597 94 HOH HOH . E 5 HOH A 95 598 95 HOH HOH . E 5 HOH A 96 599 96 HOH HOH . E 5 HOH A 97 600 97 HOH HOH . E 5 HOH A 98 601 98 HOH HOH . E 5 HOH A 99 602 99 HOH HOH . E 5 HOH A 100 603 100 HOH HOH . E 5 HOH A 101 604 101 HOH HOH . E 5 HOH A 102 605 102 HOH HOH . E 5 HOH A 103 606 103 HOH HOH . E 5 HOH A 104 607 104 HOH HOH . E 5 HOH A 105 608 105 HOH HOH . E 5 HOH A 106 609 106 HOH HOH . E 5 HOH A 107 610 107 HOH HOH . E 5 HOH A 108 611 108 HOH HOH . E 5 HOH A 109 612 109 HOH HOH . E 5 HOH A 110 613 110 HOH HOH . E 5 HOH A 111 614 111 HOH HOH . E 5 HOH A 112 615 112 HOH HOH . E 5 HOH A 113 616 113 HOH HOH . E 5 HOH A 114 617 114 HOH HOH . E 5 HOH A 115 618 115 HOH HOH . E 5 HOH A 116 619 116 HOH HOH . E 5 HOH A 117 620 117 HOH HOH . E 5 HOH A 118 621 118 HOH HOH . E 5 HOH A 119 622 119 HOH HOH . E 5 HOH A 120 623 120 HOH HOH . E 5 HOH A 121 624 121 HOH HOH . E 5 HOH A 122 625 122 HOH HOH . E 5 HOH A 123 626 123 HOH HOH . E 5 HOH A 124 627 124 HOH HOH . E 5 HOH A 125 628 125 HOH HOH . E 5 HOH A 126 629 126 HOH HOH . E 5 HOH A 127 630 127 HOH HOH . E 5 HOH A 128 631 128 HOH HOH . E 5 HOH A 129 632 129 HOH HOH . E 5 HOH A 130 633 130 HOH HOH . E 5 HOH A 131 634 131 HOH HOH . E 5 HOH A 132 635 132 HOH HOH . E 5 HOH A 133 636 133 HOH HOH . E 5 HOH A 134 637 134 HOH HOH . E 5 HOH A 135 638 135 HOH HOH . E 5 HOH A 136 639 136 HOH HOH . E 5 HOH A 137 640 137 HOH HOH . E 5 HOH A 138 641 138 HOH HOH . E 5 HOH A 139 642 139 HOH HOH . E 5 HOH A 140 643 140 HOH HOH . E 5 HOH A 141 644 141 HOH HOH . E 5 HOH A 142 645 142 HOH HOH . E 5 HOH A 143 646 143 HOH HOH . E 5 HOH A 144 647 144 HOH HOH . E 5 HOH A 145 648 145 HOH HOH . E 5 HOH A 146 649 146 HOH HOH . E 5 HOH A 147 650 147 HOH HOH . E 5 HOH A 148 651 148 HOH HOH . E 5 HOH A 149 652 149 HOH HOH . E 5 HOH A 150 653 150 HOH HOH . E 5 HOH A 151 654 151 HOH HOH . E 5 HOH A 152 655 152 HOH HOH . E 5 HOH A 153 656 153 HOH HOH . E 5 HOH A 154 657 154 HOH HOH . E 5 HOH A 155 658 155 HOH HOH . E 5 HOH A 156 659 156 HOH HOH . E 5 HOH A 157 660 157 HOH HOH . E 5 HOH A 158 661 158 HOH HOH . E 5 HOH A 159 662 159 HOH HOH . E 5 HOH A 160 663 160 HOH HOH . E 5 HOH A 161 664 161 HOH HOH . E 5 HOH A 162 665 162 HOH HOH . E 5 HOH A 163 666 163 HOH HOH . E 5 HOH A 164 667 164 HOH HOH . E 5 HOH A 165 668 165 HOH HOH . E 5 HOH A 166 669 166 HOH HOH . E 5 HOH A 167 670 167 HOH HOH . E 5 HOH A 168 671 168 HOH HOH . E 5 HOH A 169 672 169 HOH HOH . E 5 HOH A 170 673 170 HOH HOH . E 5 HOH A 171 674 171 HOH HOH . E 5 HOH A 172 675 172 HOH HOH . E 5 HOH A 173 676 173 HOH HOH . E 5 HOH A 174 677 174 HOH HOH . E 5 HOH A 175 678 175 HOH HOH . E 5 HOH A 176 679 176 HOH HOH . E 5 HOH A 177 680 177 HOH HOH . E 5 HOH A 178 681 178 HOH HOH . E 5 HOH A 179 682 179 HOH HOH . E 5 HOH A 180 683 180 HOH HOH . E 5 HOH A 181 684 181 HOH HOH . E 5 HOH A 182 685 182 HOH HOH . E 5 HOH A 183 686 183 HOH HOH . E 5 HOH A 184 687 184 HOH HOH . E 5 HOH A 185 688 185 HOH HOH . E 5 HOH A 186 689 186 HOH HOH . E 5 HOH A 187 690 187 HOH HOH . E 5 HOH A 188 691 188 HOH HOH . E 5 HOH A 189 692 189 HOH HOH . E 5 HOH A 190 693 190 HOH HOH . E 5 HOH A 191 694 191 HOH HOH . E 5 HOH A 192 695 192 HOH HOH . E 5 HOH A 193 696 193 HOH HOH . E 5 HOH A 194 697 194 HOH HOH . E 5 HOH A 195 698 195 HOH HOH . E 5 HOH A 196 699 196 HOH HOH . E 5 HOH A 197 700 197 HOH HOH . E 5 HOH A 198 701 198 HOH HOH . E 5 HOH A 199 702 199 HOH HOH . E 5 HOH A 200 703 200 HOH HOH . E 5 HOH A 201 704 201 HOH HOH . E 5 HOH A 202 705 202 HOH HOH . E 5 HOH A 203 706 203 HOH HOH . E 5 HOH A 204 707 204 HOH HOH . E 5 HOH A 205 708 205 HOH HOH . E 5 HOH A 206 709 206 HOH HOH . E 5 HOH A 207 710 207 HOH HOH . E 5 HOH A 208 711 208 HOH HOH . E 5 HOH A 209 712 209 HOH HOH . E 5 HOH A 210 713 210 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N ASP . . . C 3 -0.399 33.689 20.72 1 25.1 ? N ASP 501 A 1 HETATM 2 C CA ASP . . . C 3 -0.724 32.271 20.807 1 24.95 ? CA ASP 501 A 1 HETATM 3 C C ASP . . . C 3 -1.908 32.032 21.738 1 25.26 ? C ASP 501 A 1 HETATM 4 O O ASP . . . C 3 -2.272 30.889 22.014 1 25.29 ? O ASP 501 A 1 HETATM 5 C CB ASP . . . C 3 0.49 31.471 21.285 1 25.05 ? CB ASP 501 A 1 HETATM 6 C CG ASP . . . C 3 1.017 31.955 22.621 1 24.24 ? CG ASP 501 A 1 HETATM 7 O OD1 ASP . . . C 3 2.082 31.467 23.054 1 24.84 ? OD1 ASP 501 A 1 HETATM 8 O OD2 ASP . . . C 3 0.365 32.822 23.24 1 24.71 ? OD2 ASP 501 A 1 HETATM 9 O OXT ASP . . . C 3 -2.572 32.975 22.177 1 25.36 ? OXT ASP 501 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 9 #