data_2NZJ
#
_model_server_result.job_id            b5iWwHWTp6WzQpkdRKuKnQ 
_model_server_result.datetime_utc      '2025-02-26 21:56:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2nzj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":252}' 
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_entry.id    2NZJ 
#
_exptl.entry_id    2NZJ 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2NZJ 
_cell.length_a            43.64 
_cell.length_b            102.284 
_cell.length_c            165.565 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2NZJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
PISA dimeric 2 software_defined_assembly 5 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G,O 1 1 
B,H,I,J,P 2 1 
C,K,L,Q 3 1 
D,M,N,R 4 1 
A,E,F,G,O 5 1 
C,K,L,Q 5 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_444 -x-1,y-1/2,-z-1/2 -1 0 0 0 1 0 0 0 -1 -43.64 -51.142 -82.7825 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 H N N 
? 2 K N N 
? 2 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 O O HOH . A HOH 1 1_555 E MG MG . A MG 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
metalc ? metalc2 O O HOH . A HOH 2 1_555 E MG MG . A MG 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
metalc ? metalc3 O O HOH . A HOH 3 1_555 E MG MG . A MG 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.81 ? 
metalc ? metalc4 O O HOH . A HOH 4 1_555 E MG MG . A MG 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.876 ? 
metalc ? metalc5 A OG1 THR 18 A THR 94 1_555 E MG MG . A MG 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? 
metalc ? metalc6 E MG MG . A MG 252 1_555 G O2B GDP . A GDP 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? 
metalc ? metalc7 P O HOH . B HOH 5 1_555 H MG MG . B MG 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? 
metalc ? metalc8 P O HOH . B HOH 6 1_555 H MG MG . B MG 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? 
metalc ? metalc9 P O HOH . B HOH 7 1_555 H MG MG . B MG 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? 
metalc ? metalc10 P O HOH . B HOH 8 1_555 H MG MG . B MG 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.956 ? 
metalc ? metalc11 B OG1 THR 18 B THR 94 1_555 H MG MG . B MG 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? 
metalc ? metalc12 H MG MG . B MG 252 1_555 J O3B GDP . B GDP 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.146 ? 
metalc ? metalc13 H MG MG . B MG 252 1_555 J O2B GDP . B GDP 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
metalc ? metalc14 Q O HOH . C HOH 9 1_555 K MG MG . C MG 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.974 ? 
metalc ? metalc15 Q O HOH . C HOH 10 1_555 K MG MG . C MG 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.965 ? 
metalc ? metalc16 Q O HOH . C HOH 11 1_555 K MG MG . C MG 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? 
metalc ? metalc17 Q O HOH . C HOH 12 1_555 K MG MG . C MG 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
metalc ? metalc18 C OG1 THR 18 C THR 94 1_555 K MG MG . C MG 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.842 ? 
metalc ? metalc19 K MG MG . C MG 252 1_555 L O2B GDP . C GDP 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? 
metalc ? metalc20 R O HOH . D HOH 13 1_555 M MG MG . D MG 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.808 ? 
metalc ? metalc21 R O HOH . D HOH 14 1_555 M MG MG . D MG 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.841 ? 
metalc ? metalc22 R O HOH . D HOH 15 1_555 M MG MG . D MG 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.801 ? 
metalc ? metalc23 R O HOH . D HOH 16 1_555 M MG MG . D MG 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
metalc ? metalc24 D OG1 THR 18 D THR 94 1_555 M MG MG . D MG 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? 
metalc ? metalc25 M MG MG . D MG 252 1_555 N O2B GDP . D GDP 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
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_atom_sites.entry_id                     2NZJ 
_atom_sites.fract_transf_matrix[1][1]    0.022915 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009777 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00604 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 MG A 1 252 101 MG MG . 
F 3 CL A 1 253 106 CL CL . 
G 4 GDP A 1 1001 1001 GDP GDP . 
H 2 MG B 1 252 102 MG MG . 
I 3 CL B 1 253 105 CL CL . 
J 4 GDP B 1 1002 1002 GDP GDP . 
K 2 MG C 1 252 103 MG MG . 
L 4 GDP C 1 1003 1003 GDP GDP . 
M 2 MG D 1 252 104 MG MG . 
N 4 GDP D 1 1004 1004 GDP GDP . 
O 5 HOH A 1 1 1 HOH HOH . 
O 5 HOH A 2 2 2 HOH HOH . 
O 5 HOH A 3 3 3 HOH HOH . 
O 5 HOH A 4 4 4 HOH HOH . 
P 5 HOH B 1 5 5 HOH HOH . 
P 5 HOH B 2 6 6 HOH HOH . 
P 5 HOH B 3 7 7 HOH HOH . 
P 5 HOH B 4 8 8 HOH HOH . 
Q 5 HOH C 1 9 9 HOH HOH . 
Q 5 HOH C 2 10 10 HOH HOH . 
Q 5 HOH C 3 11 11 HOH HOH . 
Q 5 HOH C 4 12 12 HOH HOH . 
R 5 HOH D 1 13 13 HOH HOH . 
R 5 HOH D 2 14 14 HOH HOH . 
R 5 HOH D 3 15 15 HOH HOH . 
R 5 HOH D 4 16 16 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -11.256 
_atom_site.Cartn_y               4.548 
_atom_site.Cartn_z               -19.431 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        37.1 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           252 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#