data_2O4N
#
_model_server_result.job_id            dkaKNTL2T026jYbP9H7kIg 
_model_server_result.datetime_utc      '2024-12-26 16:09:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2o4n 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":301}' 
#
_entry.id    2O4N 
#
_exptl.entry_id    2O4N 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2O4N 
_cell.length_a            59.076 
_cell.length_b            86.487 
_cell.length_c            46.439 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2O4N 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     2O4N 
_atom_sites.fract_transf_matrix[1][1]    0.016927 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011562 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.021534 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 TPV A 1 300 300 TPV TPV . 
D 3 GOL B 1 301 301 GOL GOL . 
E 4 HOH A 1 301 1 HOH HOH . 
E 4 HOH A 2 302 7 HOH HOH . 
E 4 HOH A 3 303 11 HOH HOH . 
E 4 HOH A 4 304 17 HOH HOH . 
E 4 HOH A 5 305 18 HOH HOH . 
E 4 HOH A 6 306 20 HOH HOH . 
E 4 HOH A 7 307 21 HOH HOH . 
E 4 HOH A 8 308 22 HOH HOH . 
E 4 HOH A 9 309 29 HOH HOH . 
E 4 HOH A 10 310 31 HOH HOH . 
E 4 HOH A 11 311 32 HOH HOH . 
E 4 HOH A 12 312 34 HOH HOH . 
E 4 HOH A 13 313 50 HOH HOH . 
E 4 HOH A 14 314 51 HOH HOH . 
E 4 HOH A 15 315 53 HOH HOH . 
E 4 HOH A 16 316 56 HOH HOH . 
E 4 HOH A 17 317 59 HOH HOH . 
E 4 HOH A 18 318 60 HOH HOH . 
E 4 HOH A 19 319 61 HOH HOH . 
E 4 HOH A 20 320 62 HOH HOH . 
E 4 HOH A 21 321 68 HOH HOH . 
E 4 HOH A 22 322 69 HOH HOH . 
E 4 HOH A 23 323 76 HOH HOH . 
E 4 HOH A 24 324 84 HOH HOH . 
E 4 HOH A 25 325 86 HOH HOH . 
E 4 HOH A 26 326 95 HOH HOH . 
E 4 HOH A 27 327 96 HOH HOH . 
E 4 HOH A 28 328 103 HOH HOH . 
E 4 HOH A 29 329 104 HOH HOH . 
E 4 HOH A 30 330 105 HOH HOH . 
E 4 HOH A 31 331 106 HOH HOH . 
E 4 HOH A 32 332 107 HOH HOH . 
E 4 HOH A 33 333 112 HOH HOH . 
E 4 HOH A 34 334 114 HOH HOH . 
E 4 HOH A 35 335 116 HOH HOH . 
E 4 HOH A 36 336 117 HOH HOH . 
E 4 HOH A 37 337 121 HOH HOH . 
E 4 HOH A 38 338 124 HOH HOH . 
E 4 HOH A 39 339 127 HOH HOH . 
E 4 HOH A 40 340 128 HOH HOH . 
E 4 HOH A 41 341 129 HOH HOH . 
E 4 HOH A 42 342 139 HOH HOH . 
E 4 HOH A 43 343 141 HOH HOH . 
E 4 HOH A 44 344 144 HOH HOH . 
E 4 HOH A 45 345 145 HOH HOH . 
E 4 HOH A 46 346 152 HOH HOH . 
E 4 HOH A 47 347 154 HOH HOH . 
E 4 HOH A 48 348 155 HOH HOH . 
E 4 HOH A 49 349 157 HOH HOH . 
E 4 HOH A 50 350 164 HOH HOH . 
E 4 HOH A 51 351 167 HOH HOH . 
E 4 HOH A 52 352 171 HOH HOH . 
E 4 HOH A 53 353 172 HOH HOH . 
E 4 HOH A 54 354 174 HOH HOH . 
E 4 HOH A 55 355 176 HOH HOH . 
E 4 HOH A 56 356 177 HOH HOH . 
E 4 HOH A 57 357 179 HOH HOH . 
E 4 HOH A 58 358 181 HOH HOH . 
E 4 HOH A 59 359 182 HOH HOH . 
E 4 HOH A 60 360 185 HOH HOH . 
E 4 HOH A 61 361 186 HOH HOH . 
E 4 HOH A 62 362 187 HOH HOH . 
E 4 HOH A 63 363 188 HOH HOH . 
E 4 HOH A 64 364 191 HOH HOH . 
E 4 HOH A 65 365 193 HOH HOH . 
E 4 HOH A 66 366 194 HOH HOH . 
E 4 HOH A 67 367 196 HOH HOH . 
E 4 HOH A 68 368 199 HOH HOH . 
E 4 HOH A 69 369 200 HOH HOH . 
E 4 HOH A 70 370 202 HOH HOH . 
E 4 HOH A 71 371 203 HOH HOH . 
E 4 HOH A 72 372 204 HOH HOH . 
E 4 HOH A 73 373 205 HOH HOH . 
E 4 HOH A 74 374 208 HOH HOH . 
E 4 HOH A 75 375 209 HOH HOH . 
E 4 HOH A 76 376 210 HOH HOH . 
E 4 HOH A 77 377 219 HOH HOH . 
E 4 HOH A 78 378 224 HOH HOH . 
E 4 HOH A 79 379 228 HOH HOH . 
E 4 HOH A 80 380 229 HOH HOH . 
E 4 HOH A 81 381 230 HOH HOH . 
E 4 HOH A 82 382 231 HOH HOH . 
E 4 HOH A 83 383 238 HOH HOH . 
E 4 HOH A 84 384 239 HOH HOH . 
E 4 HOH A 85 385 240 HOH HOH . 
E 4 HOH A 86 386 243 HOH HOH . 
E 4 HOH A 87 387 245 HOH HOH . 
E 4 HOH A 88 388 246 HOH HOH . 
E 4 HOH A 89 389 247 HOH HOH . 
E 4 HOH A 90 390 249 HOH HOH . 
E 4 HOH A 91 391 251 HOH HOH . 
F 4 HOH B 1 302 2 HOH HOH . 
F 4 HOH B 2 303 3 HOH HOH . 
F 4 HOH B 3 304 4 HOH HOH . 
F 4 HOH B 4 305 6 HOH HOH . 
F 4 HOH B 5 306 8 HOH HOH . 
F 4 HOH B 6 307 9 HOH HOH . 
F 4 HOH B 7 308 10 HOH HOH . 
F 4 HOH B 8 309 13 HOH HOH . 
F 4 HOH B 9 310 14 HOH HOH . 
F 4 HOH B 10 311 15 HOH HOH . 
F 4 HOH B 11 312 23 HOH HOH . 
F 4 HOH B 12 313 26 HOH HOH . 
F 4 HOH B 13 314 30 HOH HOH . 
F 4 HOH B 14 315 33 HOH HOH . 
F 4 HOH B 15 316 36 HOH HOH . 
F 4 HOH B 16 317 38 HOH HOH . 
F 4 HOH B 17 318 39 HOH HOH . 
F 4 HOH B 18 319 40 HOH HOH . 
F 4 HOH B 19 320 41 HOH HOH . 
F 4 HOH B 20 321 43 HOH HOH . 
F 4 HOH B 21 322 44 HOH HOH . 
F 4 HOH B 22 323 45 HOH HOH . 
F 4 HOH B 23 324 47 HOH HOH . 
F 4 HOH B 24 325 48 HOH HOH . 
F 4 HOH B 25 326 49 HOH HOH . 
F 4 HOH B 26 327 52 HOH HOH . 
F 4 HOH B 27 328 54 HOH HOH . 
F 4 HOH B 28 329 58 HOH HOH . 
F 4 HOH B 29 330 71 HOH HOH . 
F 4 HOH B 30 331 75 HOH HOH . 
F 4 HOH B 31 332 78 HOH HOH . 
F 4 HOH B 32 333 80 HOH HOH . 
F 4 HOH B 33 334 83 HOH HOH . 
F 4 HOH B 34 335 94 HOH HOH . 
F 4 HOH B 35 336 111 HOH HOH . 
F 4 HOH B 36 337 119 HOH HOH . 
F 4 HOH B 37 338 120 HOH HOH . 
F 4 HOH B 38 339 126 HOH HOH . 
F 4 HOH B 39 340 130 HOH HOH . 
F 4 HOH B 40 341 131 HOH HOH . 
F 4 HOH B 41 342 132 HOH HOH . 
F 4 HOH B 42 343 135 HOH HOH . 
F 4 HOH B 43 344 136 HOH HOH . 
F 4 HOH B 44 345 140 HOH HOH . 
F 4 HOH B 45 346 143 HOH HOH . 
F 4 HOH B 46 347 147 HOH HOH . 
F 4 HOH B 47 348 149 HOH HOH . 
F 4 HOH B 48 349 153 HOH HOH . 
F 4 HOH B 49 350 156 HOH HOH . 
F 4 HOH B 50 351 159 HOH HOH . 
F 4 HOH B 51 352 160 HOH HOH . 
F 4 HOH B 52 353 161 HOH HOH . 
F 4 HOH B 53 354 162 HOH HOH . 
F 4 HOH B 54 355 163 HOH HOH . 
F 4 HOH B 55 356 165 HOH HOH . 
F 4 HOH B 56 357 166 HOH HOH . 
F 4 HOH B 57 358 168 HOH HOH . 
F 4 HOH B 58 359 169 HOH HOH . 
F 4 HOH B 59 360 170 HOH HOH . 
F 4 HOH B 60 361 173 HOH HOH . 
F 4 HOH B 61 362 175 HOH HOH . 
F 4 HOH B 62 363 178 HOH HOH . 
F 4 HOH B 63 364 180 HOH HOH . 
F 4 HOH B 64 365 183 HOH HOH . 
F 4 HOH B 65 366 184 HOH HOH . 
F 4 HOH B 66 367 189 HOH HOH . 
F 4 HOH B 67 368 190 HOH HOH . 
F 4 HOH B 68 369 192 HOH HOH . 
F 4 HOH B 69 370 195 HOH HOH . 
F 4 HOH B 70 371 197 HOH HOH . 
F 4 HOH B 71 372 198 HOH HOH . 
F 4 HOH B 72 373 201 HOH HOH . 
F 4 HOH B 73 374 206 HOH HOH . 
F 4 HOH B 74 375 207 HOH HOH . 
F 4 HOH B 75 376 211 HOH HOH . 
F 4 HOH B 76 377 212 HOH HOH . 
F 4 HOH B 77 378 213 HOH HOH . 
F 4 HOH B 78 379 214 HOH HOH . 
F 4 HOH B 79 380 215 HOH HOH . 
F 4 HOH B 80 381 216 HOH HOH . 
F 4 HOH B 81 382 217 HOH HOH . 
F 4 HOH B 82 383 218 HOH HOH . 
F 4 HOH B 83 384 220 HOH HOH . 
F 4 HOH B 84 385 221 HOH HOH . 
F 4 HOH B 85 386 222 HOH HOH . 
F 4 HOH B 86 387 223 HOH HOH . 
F 4 HOH B 87 388 225 HOH HOH . 
F 4 HOH B 88 389 226 HOH HOH . 
F 4 HOH B 89 390 227 HOH HOH . 
F 4 HOH B 90 391 232 HOH HOH . 
F 4 HOH B 91 392 233 HOH HOH . 
F 4 HOH B 92 393 234 HOH HOH . 
F 4 HOH B 93 394 235 HOH HOH . 
F 4 HOH B 94 395 236 HOH HOH . 
F 4 HOH B 95 396 237 HOH HOH . 
F 4 HOH B 96 397 241 HOH HOH . 
F 4 HOH B 97 398 242 HOH HOH . 
F 4 HOH B 98 399 244 HOH HOH . 
F 4 HOH B 99 400 248 HOH HOH . 
F 4 HOH B 100 401 250 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 3 18.511 26.817 15.948 1 26.31 ? C1 GOL 301 B 1 
HETATM 2 O O1 GOL . . . D 3 18.233 28.205 15.92 1 28.81 ? O1 GOL 301 B 1 
HETATM 3 C C2 GOL . . . D 3 18.596 26.283 17.374 1 26.32 ? C2 GOL 301 B 1 
HETATM 4 O O2 GOL . . . D 3 17.415 26.482 18.151 1 26.84 ? O2 GOL 301 B 1 
HETATM 5 C C3 GOL . . . D 3 18.855 24.787 17.275 1 26.55 ? C3 GOL 301 B 1 
HETATM 6 O O3 GOL . . . D 3 18.681 24.255 18.576 1 22.82 ? O3 GOL 301 B 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           323 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#