data_2O52 # _model_server_result.job_id ZcrFq-kVJLkEem8y7Ottpg _model_server_result.datetime_utc '2025-02-05 12:52:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2o52 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1003}' # _entry.id 2O52 # _exptl.entry_id 2O52 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight ? _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'UNKNOWN ATOM OR ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2O52 _cell.length_a 67.528 _cell.length_b 67.528 _cell.length_c 179.955 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2O52 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,J 1 1 B,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 39 A SER 22 1_555 C MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc2 D O2B GDP . A GDP 601 1_555 C MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc3 C MG MG . A MG 602 1_555 J O HOH . A HOH 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc4 C MG MG . A MG 602 1_555 J O HOH . A HOH 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc5 C MG MG . A MG 602 1_555 J O HOH . A HOH 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc6 C MG MG . A MG 602 1_555 J O HOH . A HOH 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc7 B OG SER 39 B SER 22 1_555 G MG MG . B MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc8 H O2B GDP . B GDP 601 1_555 G MG MG . B MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc9 G MG MG . B MG 602 1_555 K O HOH . B HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc10 G MG MG . B MG 602 1_555 K O HOH . B HOH 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc11 G MG MG . B MG 602 1_555 K O HOH . B HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? metalc ? metalc12 G MG MG . B MG 602 1_555 K O HOH . B HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? # _chem_comp.formula ? _chem_comp.formula_weight ? _chem_comp.id UNX _chem_comp.mon_nstd_flag . _chem_comp.name 'UNKNOWN ATOM OR ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2O52 _atom_sites.fract_transf_matrix[1][1] 0.01481 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01481 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00556 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 602 602 MG MG . D 3 GDP A 1 601 601 GDP GDP . E 4 BME A 1 603 603 BME BME . F 5 UNX A 1 1003 1003 UNX UNX . G 2 MG B 1 602 602 MG MG . H 3 GDP B 1 601 601 GDP GDP . I 4 BME B 1 603 603 BME BME . J 6 HOH A 1 1004 7 HOH HOH . J 6 HOH A 2 1005 8 HOH HOH . J 6 HOH A 3 1006 9 HOH HOH . J 6 HOH A 4 1007 10 HOH HOH . J 6 HOH A 5 1008 11 HOH HOH . J 6 HOH A 6 1009 12 HOH HOH . J 6 HOH A 7 1010 13 HOH HOH . J 6 HOH A 8 1011 14 HOH HOH . J 6 HOH A 9 1012 15 HOH HOH . J 6 HOH A 10 1013 16 HOH HOH . J 6 HOH A 11 1014 17 HOH HOH . J 6 HOH A 12 1015 18 HOH HOH . J 6 HOH A 13 1016 20 HOH HOH . J 6 HOH A 14 1017 21 HOH HOH . J 6 HOH A 15 1018 22 HOH HOH . J 6 HOH A 16 1019 23 HOH HOH . J 6 HOH A 17 1020 24 HOH HOH . J 6 HOH A 18 1021 25 HOH HOH . J 6 HOH A 19 1022 26 HOH HOH . J 6 HOH A 20 1023 27 HOH HOH . J 6 HOH A 21 1024 28 HOH HOH . J 6 HOH A 22 1025 29 HOH HOH . J 6 HOH A 23 1026 30 HOH HOH . J 6 HOH A 24 1027 31 HOH HOH . J 6 HOH A 25 1028 32 HOH HOH . J 6 HOH A 26 1029 33 HOH HOH . J 6 HOH A 27 1030 34 HOH HOH . J 6 HOH A 28 1031 35 HOH HOH . J 6 HOH A 29 1032 36 HOH HOH . J 6 HOH A 30 1033 54 HOH HOH . J 6 HOH A 31 1034 55 HOH HOH . J 6 HOH A 32 1035 56 HOH HOH . J 6 HOH A 33 1036 63 HOH HOH . J 6 HOH A 34 1037 64 HOH HOH . J 6 HOH A 35 1038 67 HOH HOH . J 6 HOH A 36 1039 69 HOH HOH . J 6 HOH A 37 1040 72 HOH HOH . J 6 HOH A 38 1041 73 HOH HOH . K 6 HOH B 1 604 1 HOH HOH . K 6 HOH B 2 605 2 HOH HOH . K 6 HOH B 3 606 3 HOH HOH . K 6 HOH B 4 607 4 HOH HOH . K 6 HOH B 5 608 5 HOH HOH . K 6 HOH B 6 609 6 HOH HOH . K 6 HOH B 7 610 19 HOH HOH . K 6 HOH B 8 611 37 HOH HOH . K 6 HOH B 9 612 38 HOH HOH . K 6 HOH B 10 613 39 HOH HOH . K 6 HOH B 11 614 40 HOH HOH . K 6 HOH B 12 615 41 HOH HOH . K 6 HOH B 13 616 42 HOH HOH . K 6 HOH B 14 617 43 HOH HOH . K 6 HOH B 15 618 44 HOH HOH . K 6 HOH B 16 619 45 HOH HOH . K 6 HOH B 17 620 46 HOH HOH . K 6 HOH B 18 621 47 HOH HOH . K 6 HOH B 19 622 48 HOH HOH . K 6 HOH B 20 623 49 HOH HOH . K 6 HOH B 21 624 50 HOH HOH . K 6 HOH B 22 625 51 HOH HOH . K 6 HOH B 23 626 52 HOH HOH . K 6 HOH B 24 627 53 HOH HOH . K 6 HOH B 25 628 57 HOH HOH . K 6 HOH B 26 629 58 HOH HOH . K 6 HOH B 27 630 59 HOH HOH . K 6 HOH B 28 631 60 HOH HOH . K 6 HOH B 29 632 61 HOH HOH . K 6 HOH B 30 633 62 HOH HOH . K 6 HOH B 31 634 65 HOH HOH . K 6 HOH B 32 635 66 HOH HOH . K 6 HOH B 33 636 68 HOH HOH . K 6 HOH B 34 637 70 HOH HOH . K 6 HOH B 35 638 71 HOH HOH . K 6 HOH B 36 639 74 HOH HOH . K 6 HOH B 37 640 75 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol X _atom_site.label_atom_id UNK _atom_site.label_comp_id UNX _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 5 _atom_site.Cartn_x 12.855 _atom_site.Cartn_y -25.191 _atom_site.Cartn_z 18.277 _atom_site.occupancy 0.01 _atom_site.B_iso_or_equiv 2 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id UNK _atom_site.auth_comp_id UNX _atom_site.auth_seq_id 1003 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #