data_2O5A
#
_model_server_result.job_id            08pjd2qJqmkAKVQmP4cmfw 
_model_server_result.datetime_utc      '2024-10-18 16:21:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2o5a 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":127}' 
#
_entry.id    2O5A 
#
_exptl.entry_id    2O5A 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2O5A 
_cell.length_a            119.936 
_cell.length_b            32.021 
_cell.length_c            59.546 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2O5A 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ASN 26 A ASN 26 1_555 A N MSE 27 A MSE 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? 
covale ? covale2 A C MSE 27 A MSE 27 1_555 A N LYS 28 A LYS 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.294 ? 
covale ? covale3 B C ASN 26 B ASN 26 1_555 B N MSE 27 B MSE 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale4 B C MSE 27 B MSE 27 1_555 B N LYS 28 B LYS 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.311 ? 
metalc ? metalc1 A OE1 GLU 45 A GLU 45 1_555 C MN MN . A MN 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2O5A 
_atom_sites.fract_transf_matrix[1][1]    0.008338 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.03123 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016794 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MN A 1 126 1 MN MN . 
D 2 MN A 1 127 3 MN MN . 
E 2 MN A 1 128 5 MN MN . 
F 2 MN B 1 126 2 MN MN . 
G 3 SO4 B 1 127 6 SO4 SO4 . 
H 4 HOH A 1 3002 3002 HOH HOH . 
H 4 HOH A 2 3004 3004 HOH HOH . 
H 4 HOH A 3 3005 3005 HOH HOH . 
H 4 HOH A 4 3006 3006 HOH HOH . 
H 4 HOH A 5 3008 3008 HOH HOH . 
H 4 HOH A 6 3020 3020 HOH HOH . 
H 4 HOH A 7 3021 3021 HOH HOH . 
H 4 HOH A 8 3024 3024 HOH HOH . 
H 4 HOH A 9 3025 3025 HOH HOH . 
H 4 HOH A 10 3026 3026 HOH HOH . 
H 4 HOH A 11 3029 3029 HOH HOH . 
H 4 HOH A 12 3030 3030 HOH HOH . 
H 4 HOH A 13 3034 3034 HOH HOH . 
H 4 HOH A 14 3035 3035 HOH HOH . 
H 4 HOH A 15 3040 3040 HOH HOH . 
H 4 HOH A 16 3047 3047 HOH HOH . 
H 4 HOH A 17 3050 3050 HOH HOH . 
H 4 HOH A 18 3052 3052 HOH HOH . 
H 4 HOH A 19 3054 3054 HOH HOH . 
H 4 HOH A 20 3055 3055 HOH HOH . 
H 4 HOH A 21 3056 3056 HOH HOH . 
H 4 HOH A 22 3057 3057 HOH HOH . 
I 4 HOH B 1 3007 3007 HOH HOH . 
I 4 HOH B 2 3012 3012 HOH HOH . 
I 4 HOH B 3 3015 3015 HOH HOH . 
I 4 HOH B 4 3016 3016 HOH HOH . 
I 4 HOH B 5 3017 3017 HOH HOH . 
I 4 HOH B 6 3018 3018 HOH HOH . 
I 4 HOH B 7 3023 3023 HOH HOH . 
I 4 HOH B 8 3031 3031 HOH HOH . 
I 4 HOH B 9 3036 3036 HOH HOH . 
I 4 HOH B 10 3037 3037 HOH HOH . 
I 4 HOH B 11 3038 3038 HOH HOH . 
I 4 HOH B 12 3042 3042 HOH HOH . 
I 4 HOH B 13 3045 3045 HOH HOH . 
I 4 HOH B 14 3046 3046 HOH HOH . 
I 4 HOH B 15 3048 3048 HOH HOH . 
I 4 HOH B 16 3049 3049 HOH HOH . 
I 4 HOH B 17 3053 3053 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               60.314 
_atom_site.Cartn_y               30.935 
_atom_site.Cartn_z               -1.539 
_atom_site.occupancy             0.5 
_atom_site.B_iso_or_equiv        51.9 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           127 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              54 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           296 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#