data_2O5B
#
_model_server_result.job_id            Y5CEx7P-aXGf8B9rEeAjkw 
_model_server_result.datetime_utc      '2024-11-08 03:47:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2o5b 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":154}' 
#
_entry.id    2O5B 
#
_exptl.entry_id    2O5B 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              615.58 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE PROTOPORPHYRIN IX' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          105.45 
_cell.angle_gamma         90 
_cell.entry_id            2O5B 
_cell.length_a            35.207 
_cell.length_b            28.741 
_cell.length_c            64.201 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2O5B 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   metalc 
_struct_conn.details                        ? 
_struct_conn.id                             metalc1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            NE2 
_struct_conn.ptnr1_label_comp_id            HIS 
_struct_conn.ptnr1_label_seq_id             93 
_struct_conn.ptnr1_auth_asym_id             X 
_struct_conn.ptnr1_auth_comp_id             HIS 
_struct_conn.ptnr1_auth_seq_id              93 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            E 
_struct_conn.ptnr2_label_atom_id            MN 
_struct_conn.ptnr2_label_comp_id            MNH 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             X 
_struct_conn.ptnr2_auth_comp_id             MNH 
_struct_conn.ptnr2_auth_seq_id              154 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.268 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C34 H32 Mn N4 O4 4' 
_chem_comp.formula_weight    615.58 
_chem_comp.id                MNH 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE PROTOPORPHYRIN IX' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
MN NA MNH sing 224 n n 
MN NB MNH sing 225 n n 
MN NC MNH sing 226 n n 
MN ND MNH sing 227 n n 
CHA C1A MNH doub 228 n y 
CHA C4D MNH sing 229 n y 
CHA HHA MNH sing 230 n n 
CHB C4A MNH doub 231 n y 
CHB C1B MNH sing 232 n y 
CHB HHB MNH sing 233 n n 
CHC C4B MNH doub 234 n y 
CHC C1C MNH sing 235 n y 
CHC HHC MNH sing 236 n n 
CHD C4C MNH sing 237 n y 
CHD C1D MNH doub 238 n y 
CHD HHD MNH sing 239 n n 
NA C1A MNH sing 240 n y 
NA C4A MNH sing 241 n y 
C1A C2A MNH sing 242 n y 
C2A C3A MNH doub 243 n y 
C2A CAA MNH sing 244 n n 
C3A C4A MNH sing 245 n y 
C3A CMA MNH sing 246 n n 
CMA HMA1 MNH sing 247 n n 
CMA HMA2 MNH sing 248 n n 
CMA HMA3 MNH sing 249 n n 
CAA CBA MNH sing 250 n n 
CAA HAA1 MNH sing 251 n n 
CAA HAA2 MNH sing 252 n n 
CBA CGA MNH sing 253 n n 
CBA HBA1 MNH sing 254 n n 
CBA HBA2 MNH sing 255 n n 
CGA O1A MNH sing 256 n n 
CGA O2A MNH doub 257 n n 
O1A H1A MNH sing 258 n n 
NB C1B MNH doub 259 n y 
NB C4B MNH sing 260 n y 
C1B C2B MNH sing 261 n n 
C2B C3B MNH doub 262 n n 
C2B CMB MNH sing 263 n n 
C3B C4B MNH sing 264 n n 
C3B CAB MNH sing 265 n n 
CMB HMB1 MNH sing 266 n n 
CMB HMB2 MNH sing 267 n n 
CMB HMB3 MNH sing 268 n n 
CAB CBB MNH doub 269 n n 
CAB HAB MNH sing 270 n n 
CBB HBB1 MNH sing 271 n n 
CBB HBB2 MNH sing 272 n n 
NC C1C MNH sing 273 n y 
NC C4C MNH sing 274 n y 
C1C C2C MNH doub 275 n y 
C2C C3C MNH sing 276 n y 
C2C CMC MNH sing 277 n n 
C3C C4C MNH doub 278 n y 
C3C CAC MNH sing 279 n n 
CMC HMC1 MNH sing 280 n n 
CMC HMC2 MNH sing 281 n n 
CMC HMC3 MNH sing 282 n n 
CAC CBC MNH doub 283 n n 
CAC HAC MNH sing 284 n n 
CBC HBC1 MNH sing 285 n n 
CBC HBC2 MNH sing 286 n n 
ND C1D MNH sing 287 n y 
ND C4D MNH doub 288 n y 
C1D C2D MNH sing 289 n n 
C2D C3D MNH doub 290 n n 
C2D CMD MNH sing 291 n n 
C3D C4D MNH sing 292 n n 
C3D CAD MNH sing 293 n n 
CMD HMD1 MNH sing 294 n n 
CMD HMD2 MNH sing 295 n n 
CMD HMD3 MNH sing 296 n n 
CAD CBD MNH sing 297 n n 
CAD HAD1 MNH sing 298 n n 
CAD HAD2 MNH sing 299 n n 
CBD CGD MNH sing 300 n n 
CBD HBD1 MNH sing 301 n n 
CBD HBD2 MNH sing 302 n n 
CGD O1D MNH doub 303 n n 
CGD O2D MNH sing 304 n n 
O2D H2D MNH sing 305 n n 
#
_atom_sites.entry_id                     2O5B 
_atom_sites.fract_transf_matrix[1][1]    0.028403 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00785 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.034794 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01616 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 X 1 157 157 SO4 SO4 . 
C 2 SO4 X 1 158 158 SO4 SO4 . 
D 2 SO4 X 1 159 159 SO4 SO4 . 
E 3 MNH X 1 154 154 MNH MNH . 
F 4 HOH X 1 160 160 HOH HOH . 
F 4 HOH X 2 161 161 HOH HOH . 
F 4 HOH X 3 162 162 HOH HOH . 
F 4 HOH X 4 163 163 HOH HOH . 
F 4 HOH X 5 164 164 HOH HOH . 
F 4 HOH X 6 165 165 HOH HOH . 
F 4 HOH X 7 166 166 HOH HOH . 
F 4 HOH X 8 167 167 HOH HOH . 
F 4 HOH X 9 168 168 HOH HOH . 
F 4 HOH X 10 169 169 HOH HOH . 
F 4 HOH X 11 170 170 HOH HOH . 
F 4 HOH X 12 171 171 HOH HOH . 
F 4 HOH X 13 172 172 HOH HOH . 
F 4 HOH X 14 173 173 HOH HOH . 
F 4 HOH X 15 174 174 HOH HOH . 
F 4 HOH X 16 175 175 HOH HOH . 
F 4 HOH X 17 176 176 HOH HOH . 
F 4 HOH X 18 177 177 HOH HOH . 
F 4 HOH X 19 178 178 HOH HOH . 
F 4 HOH X 20 179 179 HOH HOH . 
F 4 HOH X 21 180 180 HOH HOH . 
F 4 HOH X 22 181 181 HOH HOH . 
F 4 HOH X 23 182 182 HOH HOH . 
F 4 HOH X 24 183 183 HOH HOH . 
F 4 HOH X 25 184 184 HOH HOH . 
F 4 HOH X 26 185 185 HOH HOH . 
F 4 HOH X 27 186 186 HOH HOH . 
F 4 HOH X 28 187 187 HOH HOH . 
F 4 HOH X 29 188 188 HOH HOH . 
F 4 HOH X 30 189 189 HOH HOH . 
F 4 HOH X 31 190 190 HOH HOH . 
F 4 HOH X 32 191 191 HOH HOH . 
F 4 HOH X 33 192 192 HOH HOH . 
F 4 HOH X 34 194 194 HOH HOH . 
F 4 HOH X 35 195 195 HOH HOH . 
F 4 HOH X 36 196 196 HOH HOH . 
F 4 HOH X 37 197 197 HOH HOH . 
F 4 HOH X 38 198 198 HOH HOH . 
F 4 HOH X 39 199 199 HOH HOH . 
F 4 HOH X 40 200 200 HOH HOH . 
F 4 HOH X 41 201 201 HOH HOH . 
F 4 HOH X 42 202 202 HOH HOH . 
F 4 HOH X 43 203 203 HOH HOH . 
F 4 HOH X 44 204 204 HOH HOH . 
F 4 HOH X 45 205 205 HOH HOH . 
F 4 HOH X 46 206 206 HOH HOH . 
F 4 HOH X 47 207 207 HOH HOH . 
F 4 HOH X 48 208 208 HOH HOH . 
F 4 HOH X 49 209 209 HOH HOH . 
F 4 HOH X 50 210 210 HOH HOH . 
F 4 HOH X 51 211 211 HOH HOH . 
F 4 HOH X 52 212 212 HOH HOH . 
F 4 HOH X 53 213 213 HOH HOH . 
F 4 HOH X 54 214 214 HOH HOH . 
F 4 HOH X 55 215 215 HOH HOH . 
F 4 HOH X 56 216 216 HOH HOH . 
F 4 HOH X 57 217 217 HOH HOH . 
F 4 HOH X 58 218 218 HOH HOH . 
F 4 HOH X 59 219 219 HOH HOH . 
F 4 HOH X 60 220 220 HOH HOH . 
F 4 HOH X 61 222 222 HOH HOH . 
F 4 HOH X 62 224 224 HOH HOH . 
F 4 HOH X 63 225 225 HOH HOH . 
F 4 HOH X 64 227 227 HOH HOH . 
F 4 HOH X 65 228 228 HOH HOH . 
F 4 HOH X 66 229 229 HOH HOH . 
F 4 HOH X 67 230 230 HOH HOH . 
F 4 HOH X 68 231 231 HOH HOH . 
F 4 HOH X 69 232 232 HOH HOH . 
F 4 HOH X 70 234 234 HOH HOH . 
F 4 HOH X 71 235 235 HOH HOH . 
F 4 HOH X 72 236 236 HOH HOH . 
F 4 HOH X 73 237 237 HOH HOH . 
F 4 HOH X 74 238 238 HOH HOH . 
F 4 HOH X 75 239 239 HOH HOH . 
F 4 HOH X 76 240 240 HOH HOH . 
F 4 HOH X 77 241 241 HOH HOH . 
F 4 HOH X 78 242 242 HOH HOH . 
F 4 HOH X 79 243 243 HOH HOH . 
F 4 HOH X 80 244 244 HOH HOH . 
F 4 HOH X 81 245 245 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 MN MN MNH . . . E 3 -0.853 6.431 14.774 1 24.91 ? MN MNH 154 X 1 
HETATM 2 C CHA MNH . . . E 3 -0.855 9.751 16.304 1 22.32 ? CHA MNH 154 X 1 
HETATM 3 C CHB MNH . . . E 3 -4.456 6.447 15.001 1 24.89 ? CHB MNH 154 X 1 
HETATM 4 C CHC MNH . . . E 3 -0.806 3.172 14.13 1 25.43 ? CHC MNH 154 X 1 
HETATM 5 C CHD MNH . . . E 3 2.6 6.374 15.217 1 21.68 ? CHD MNH 154 X 1 
HETATM 6 N NA MNH . . . E 3 -2.264 7.743 15.57 1 24.56 ? NA MNH 154 X 1 
HETATM 7 C C1A MNH . . . E 3 -2.095 9.006 16.023 1 19.01 ? C1A MNH 154 X 1 
HETATM 8 C C2A MNH . . . E 3 -3.302 9.709 16.219 1 24.32 ? C2A MNH 154 X 1 
HETATM 9 C C3A MNH . . . E 3 -4.38 8.784 15.876 1 22.79 ? C3A MNH 154 X 1 
HETATM 10 C C4A MNH . . . E 3 -3.629 7.597 15.46 1 24.31 ? C4A MNH 154 X 1 
HETATM 11 C CMA MNH . . . E 3 -5.906 9.035 15.983 1 18.74 ? CMA MNH 154 X 1 
HETATM 12 C CAA MNH . . . E 3 -3.525 11.163 16.685 1 21.69 ? CAA MNH 154 X 1 
HETATM 13 C CBA MNH . . . E 3 -3.855 12.008 15.483 1 23.17 ? CBA MNH 154 X 1 
HETATM 14 C CGA MNH . . . E 3 -2.821 12.048 14.353 1 30.17 ? CGA MNH 154 X 1 
HETATM 15 O O1A MNH . . . E 3 -1.633 12.392 14.563 1 28.34 ? O1A MNH 154 X 1 
HETATM 16 O O2A MNH . . . E 3 -3.22 11.733 13.179 1 32.64 ? O2A MNH 154 X 1 
HETATM 17 N NB MNH . . . E 3 -2.369 5.054 14.65 1 27.1 ? NB MNH 154 X 1 
HETATM 18 C C1B MNH . . . E 3 -3.698 5.175 14.688 1 25.55 ? C1B MNH 154 X 1 
HETATM 19 C C2B MNH . . . E 3 -4.387 4.023 14.445 1 25.1 ? C2B MNH 154 X 1 
HETATM 20 C C3B MNH . . . E 3 -3.293 3.083 14.185 1 23.33 ? C3B MNH 154 X 1 
HETATM 21 C C4B MNH . . . E 3 -2 3.802 14.317 1 27.69 ? C4B MNH 154 X 1 
HETATM 22 C CMB MNH . . . E 3 -5.901 3.909 14.435 1 21.64 ? CMB MNH 154 X 1 
HETATM 23 C CAB MNH . . . E 3 -3.396 1.629 13.856 1 26.4 ? CAB MNH 154 X 1 
HETATM 24 C CBB MNH . . . E 3 -4.515 0.935 13.814 1 24.95 ? CBB MNH 154 X 1 
HETATM 25 N NC MNH . . . E 3 0.593 5.006 14.701 1 24.05 ? NC MNH 154 X 1 
HETATM 26 C C1C MNH . . . E 3 0.299 3.756 14.362 1 23.69 ? C1C MNH 154 X 1 
HETATM 27 C C2C MNH . . . E 3 1.558 2.966 14.303 1 26.26 ? C2C MNH 154 X 1 
HETATM 28 C C3C MNH . . . E 3 2.624 4.046 14.459 1 25.99 ? C3C MNH 154 X 1 
HETATM 29 C C4C MNH . . . E 3 1.882 5.262 14.875 1 23.06 ? C4C MNH 154 X 1 
HETATM 30 C CMC MNH . . . E 3 1.657 1.486 13.965 1 22.1 ? CMC MNH 154 X 1 
HETATM 31 C CAC MNH . . . E 3 4.061 3.93 15.03 1 25.93 ? CAC MNH 154 X 1 
HETATM 32 C CBC MNH . . . E 3 4.966 3.074 14.672 1 23.82 ? CBC MNH 154 X 1 
HETATM 33 N ND MNH . . . E 3 0.496 7.813 15.588 1 25.07 ? ND MNH 154 X 1 
HETATM 34 C C1D MNH . . . E 3 1.887 7.647 15.629 1 20.97 ? C1D MNH 154 X 1 
HETATM 35 C C2D MNH . . . E 3 2.73 8.771 16.138 1 22.7 ? C2D MNH 154 X 1 
HETATM 36 C C3D MNH . . . E 3 1.706 9.754 16.558 1 25.83 ? C3D MNH 154 X 1 
HETATM 37 C C4D MNH . . . E 3 0.441 9.066 16.156 1 22.77 ? C4D MNH 154 X 1 
HETATM 38 C CMD MNH . . . E 3 4.253 8.785 16.324 1 20.31 ? CMD MNH 154 X 1 
HETATM 39 C CAD MNH . . . E 3 1.913 11.126 17.253 1 26.68 ? CAD MNH 154 X 1 
HETATM 40 C CBD MNH . . . E 3 2.366 10.739 18.662 1 28.88 ? CBD MNH 154 X 1 
HETATM 41 C CGD MNH . . . E 3 2.559 11.935 19.613 1 31.98 ? CGD MNH 154 X 1 
HETATM 42 O O1D MNH . . . E 3 1.557 12.54 20.038 1 34.01 ? O1D MNH 154 X 1 
HETATM 43 O O2D MNH . . . E 3 3.712 12.27 20.003 1 37.98 ? O2D MNH 154 X 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           343 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           43 
#