data_2O5S
#
_model_server_result.job_id            gXkm7AYGHMN0H_GIDksf4g 
_model_server_result.datetime_utc      '2024-11-17 02:56:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2o5s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":159}' 
#
_entry.id    2O5S 
#
_exptl.entry_id    2O5S 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              46.005 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NITRITE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          106.09 
_cell.angle_gamma         90 
_cell.entry_id            2O5S 
_cell.length_a            35.168 
_cell.length_b            28.68 
_cell.length_c            63.356 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2O5S 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 93 X HIS 93 1_555 E CO COH . X COH 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? 
metalc ? metalc2 E CO COH . X COH 154 1_555 D O2 NO2 . X NO2 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? 
metalc ? metalc3 E CO COH . X COH 154 1_555 D N NO2 . X NO2 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? 
#
_chem_comp.formula           'N O2 -1' 
_chem_comp.formula_weight    46.005 
_chem_comp.id                NO2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NITRITE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N O1 NO2 doub 306 n n 
N O2 NO2 sing 307 n n 
#
_atom_sites.entry_id                     2O5S 
_atom_sites.fract_transf_matrix[1][1]    0.028435 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.008202 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.034868 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016427 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 X 1 157 157 SO4 SO4 . 
C 2 SO4 X 1 158 158 SO4 SO4 . 
D 3 NO2 X 1 159 159 NO2 NO2 . 
E 4 COH X 1 154 154 COH COH . 
F 5 HOH X 1 160 160 HOH HOH . 
F 5 HOH X 2 161 161 HOH HOH . 
F 5 HOH X 3 162 162 HOH HOH . 
F 5 HOH X 4 163 163 HOH HOH . 
F 5 HOH X 5 164 164 HOH HOH . 
F 5 HOH X 6 165 165 HOH HOH . 
F 5 HOH X 7 166 166 HOH HOH . 
F 5 HOH X 8 167 167 HOH HOH . 
F 5 HOH X 9 168 168 HOH HOH . 
F 5 HOH X 10 169 169 HOH HOH . 
F 5 HOH X 11 170 170 HOH HOH . 
F 5 HOH X 12 171 171 HOH HOH . 
F 5 HOH X 13 172 172 HOH HOH . 
F 5 HOH X 14 173 173 HOH HOH . 
F 5 HOH X 15 174 174 HOH HOH . 
F 5 HOH X 16 175 175 HOH HOH . 
F 5 HOH X 17 176 176 HOH HOH . 
F 5 HOH X 18 177 177 HOH HOH . 
F 5 HOH X 19 178 178 HOH HOH . 
F 5 HOH X 20 179 179 HOH HOH . 
F 5 HOH X 21 180 180 HOH HOH . 
F 5 HOH X 22 181 181 HOH HOH . 
F 5 HOH X 23 182 182 HOH HOH . 
F 5 HOH X 24 183 183 HOH HOH . 
F 5 HOH X 25 184 184 HOH HOH . 
F 5 HOH X 26 185 185 HOH HOH . 
F 5 HOH X 27 186 186 HOH HOH . 
F 5 HOH X 28 187 187 HOH HOH . 
F 5 HOH X 29 188 188 HOH HOH . 
F 5 HOH X 30 189 189 HOH HOH . 
F 5 HOH X 31 190 190 HOH HOH . 
F 5 HOH X 32 191 191 HOH HOH . 
F 5 HOH X 33 192 192 HOH HOH . 
F 5 HOH X 34 193 193 HOH HOH . 
F 5 HOH X 35 194 194 HOH HOH . 
F 5 HOH X 36 195 195 HOH HOH . 
F 5 HOH X 37 196 196 HOH HOH . 
F 5 HOH X 38 197 197 HOH HOH . 
F 5 HOH X 39 198 198 HOH HOH . 
F 5 HOH X 40 199 199 HOH HOH . 
F 5 HOH X 41 200 200 HOH HOH . 
F 5 HOH X 42 201 201 HOH HOH . 
F 5 HOH X 43 202 202 HOH HOH . 
F 5 HOH X 44 203 203 HOH HOH . 
F 5 HOH X 45 204 204 HOH HOH . 
F 5 HOH X 46 205 205 HOH HOH . 
F 5 HOH X 47 206 206 HOH HOH . 
F 5 HOH X 48 207 207 HOH HOH . 
F 5 HOH X 49 208 208 HOH HOH . 
F 5 HOH X 50 209 209 HOH HOH . 
F 5 HOH X 51 210 210 HOH HOH . 
F 5 HOH X 52 211 211 HOH HOH . 
F 5 HOH X 53 212 212 HOH HOH . 
F 5 HOH X 54 213 213 HOH HOH . 
F 5 HOH X 55 214 214 HOH HOH . 
F 5 HOH X 56 215 215 HOH HOH . 
F 5 HOH X 57 216 216 HOH HOH . 
F 5 HOH X 58 217 217 HOH HOH . 
F 5 HOH X 59 218 218 HOH HOH . 
F 5 HOH X 60 219 219 HOH HOH . 
F 5 HOH X 61 220 220 HOH HOH . 
F 5 HOH X 62 221 221 HOH HOH . 
F 5 HOH X 63 222 222 HOH HOH . 
F 5 HOH X 64 223 223 HOH HOH . 
F 5 HOH X 65 224 224 HOH HOH . 
F 5 HOH X 66 225 225 HOH HOH . 
F 5 HOH X 67 226 226 HOH HOH . 
F 5 HOH X 68 227 227 HOH HOH . 
F 5 HOH X 69 228 228 HOH HOH . 
F 5 HOH X 70 229 229 HOH HOH . 
F 5 HOH X 71 230 230 HOH HOH . 
F 5 HOH X 72 231 231 HOH HOH . 
F 5 HOH X 73 232 232 HOH HOH . 
F 5 HOH X 74 233 233 HOH HOH . 
F 5 HOH X 75 234 234 HOH HOH . 
F 5 HOH X 76 235 235 HOH HOH . 
F 5 HOH X 77 236 236 HOH HOH . 
F 5 HOH X 78 237 237 HOH HOH . 
F 5 HOH X 79 238 238 HOH HOH . 
F 5 HOH X 80 239 239 HOH HOH . 
F 5 HOH X 81 240 240 HOH HOH . 
F 5 HOH X 82 241 241 HOH HOH . 
F 5 HOH X 83 242 242 HOH HOH . 
F 5 HOH X 84 243 243 HOH HOH . 
F 5 HOH X 85 244 244 HOH HOH . 
F 5 HOH X 86 245 245 HOH HOH . 
F 5 HOH X 87 246 246 HOH HOH . 
F 5 HOH X 88 247 247 HOH HOH . 
F 5 HOH X 89 248 248 HOH HOH . 
F 5 HOH X 90 249 249 HOH HOH . 
F 5 HOH X 91 250 250 HOH HOH . 
F 5 HOH X 92 251 251 HOH HOH . 
F 5 HOH X 93 252 252 HOH HOH . 
F 5 HOH X 94 253 253 HOH HOH . 
F 5 HOH X 95 254 254 HOH HOH . 
F 5 HOH X 96 255 255 HOH HOH . 
F 5 HOH X 97 256 256 HOH HOH . 
F 5 HOH X 98 257 257 HOH HOH . 
F 5 HOH X 99 258 258 HOH HOH . 
F 5 HOH X 100 259 259 HOH HOH . 
F 5 HOH X 101 260 260 HOH HOH . 
F 5 HOH X 102 261 261 HOH HOH . 
F 5 HOH X 103 262 262 HOH HOH . 
F 5 HOH X 104 263 263 HOH HOH . 
F 5 HOH X 105 264 264 HOH HOH . 
F 5 HOH X 106 265 265 HOH HOH . 
F 5 HOH X 107 266 266 HOH HOH . 
F 5 HOH X 108 267 267 HOH HOH . 
F 5 HOH X 109 268 268 HOH HOH . 
F 5 HOH X 110 269 269 HOH HOH . 
F 5 HOH X 111 270 270 HOH HOH . 
F 5 HOH X 112 271 271 HOH HOH . 
F 5 HOH X 113 272 272 HOH HOH . 
F 5 HOH X 114 273 273 HOH HOH . 
F 5 HOH X 115 274 274 HOH HOH . 
F 5 HOH X 116 275 275 HOH HOH . 
F 5 HOH X 117 276 276 HOH HOH . 
F 5 HOH X 118 277 277 HOH HOH . 
F 5 HOH X 119 278 278 HOH HOH . 
F 5 HOH X 120 279 279 HOH HOH . 
F 5 HOH X 121 280 280 HOH HOH . 
F 5 HOH X 122 281 281 HOH HOH . 
F 5 HOH X 123 282 282 HOH HOH . 
F 5 HOH X 124 283 283 HOH HOH . 
F 5 HOH X 125 284 284 HOH HOH . 
F 5 HOH X 126 285 285 HOH HOH . 
F 5 HOH X 127 286 286 HOH HOH . 
F 5 HOH X 128 287 287 HOH HOH . 
F 5 HOH X 129 288 288 HOH HOH . 
F 5 HOH X 130 289 289 HOH HOH . 
F 5 HOH X 131 290 290 HOH HOH . 
F 5 HOH X 132 291 291 HOH HOH . 
F 5 HOH X 133 292 292 HOH HOH . 
F 5 HOH X 134 293 293 HOH HOH . 
F 5 HOH X 135 294 294 HOH HOH . 
F 5 HOH X 136 295 295 HOH HOH . 
F 5 HOH X 137 296 296 HOH HOH . 
F 5 HOH X 138 297 297 HOH HOH . 
F 5 HOH X 139 298 298 HOH HOH . 
F 5 HOH X 140 299 299 HOH HOH . 
F 5 HOH X 141 300 300 HOH HOH . 
F 5 HOH X 142 301 301 HOH HOH . 
F 5 HOH X 143 302 302 HOH HOH . 
F 5 HOH X 144 303 303 HOH HOH . 
F 5 HOH X 145 304 304 HOH HOH . 
F 5 HOH X 146 305 305 HOH HOH . 
F 5 HOH X 147 306 306 HOH HOH . 
F 5 HOH X 148 307 307 HOH HOH . 
F 5 HOH X 149 308 308 HOH HOH . 
F 5 HOH X 150 309 309 HOH HOH . 
F 5 HOH X 151 310 310 HOH HOH . 
F 5 HOH X 152 311 311 HOH HOH . 
F 5 HOH X 153 312 312 HOH HOH . 
F 5 HOH X 154 313 313 HOH HOH . 
F 5 HOH X 155 314 314 HOH HOH . 
F 5 HOH X 156 315 315 HOH HOH . 
F 5 HOH X 157 316 316 HOH HOH . 
F 5 HOH X 158 317 317 HOH HOH . 
F 5 HOH X 159 318 318 HOH HOH . 
F 5 HOH X 160 319 319 HOH HOH . 
F 5 HOH X 161 320 320 HOH HOH . 
F 5 HOH X 162 321 321 HOH HOH . 
F 5 HOH X 163 322 322 HOH HOH . 
F 5 HOH X 164 323 323 HOH HOH . 
F 5 HOH X 165 324 324 HOH HOH . 
F 5 HOH X 166 327 327 HOH HOH . 
F 5 HOH X 167 328 328 HOH HOH . 
F 5 HOH X 168 329 329 HOH HOH . 
F 5 HOH X 169 330 330 HOH HOH . 
F 5 HOH X 170 331 331 HOH HOH . 
F 5 HOH X 171 332 332 HOH HOH . 
F 5 HOH X 172 333 333 HOH HOH . 
F 5 HOH X 173 334 334 HOH HOH . 
F 5 HOH X 174 335 335 HOH HOH . 
F 5 HOH X 175 336 336 HOH HOH . 
F 5 HOH X 176 337 337 HOH HOH . 
F 5 HOH X 177 338 338 HOH HOH . 
F 5 HOH X 178 339 339 HOH HOH . 
F 5 HOH X 179 340 340 HOH HOH . 
F 5 HOH X 180 341 341 HOH HOH . 
F 5 HOH X 181 342 342 HOH HOH . 
F 5 HOH X 182 343 343 HOH HOH . 
F 5 HOH X 183 344 344 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N NO2 . . . D 3 -17.072 -4.511 17.081 0.8 14.16 ? N NO2 159 X 1 
HETATM 2 O O1 NO2 . . . D 3 -17.589 -3.967 18.044 0.8 16.6 ? O1 NO2 159 X 1 
HETATM 3 O O2 NO2 . . . D 3 -17.055 -5.73 17.085 0.8 12.24 ? O2 NO2 159 X 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           3 
#