data_2O5W
#
_model_server_result.job_id            c_mfQcTNqcLdwb5cVu1UGg 
_model_server_result.datetime_utc      '2025-03-06 07:38:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2o5w 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":170}' 
#
_entry.id    2O5W 
#
_exptl.entry_id    2O5W 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              150.36 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SAMARIUM (III) ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          115.19 
_cell.angle_gamma         90 
_cell.entry_id            2O5W 
_cell.length_a            124.416 
_cell.length_b            42.909 
_cell.length_c            108.328 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2O5W 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G,H,I,P 1 1 
B,J,K,L,Q 2 1 
C,M,N,O,R 3 1 
D,S 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 L N N 
? 3 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 75 A CYS 75 1_555 A SG CYS 104 A CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf2 B SG CYS 75 B CYS 75 1_555 B SG CYS 104 B CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf3 C SG CYS 75 C CYS 75 1_555 C SG CYS 104 C CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
metalc ? metalc1 A O THR 40 A THR 40 1_555 H NA NA . A NA 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.629 ? 
metalc ? metalc2 A OE2 GLU 60 A GLU 60 1_555 H NA NA . A NA 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? 
metalc ? metalc3 I OPP PPV . A PPV 163 1_555 H NA NA . A NA 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? 
metalc ? metalc4 C O THR 40 C THR 40 1_555 N NA NA . C NA 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? 
metalc ? metalc5 C OE2 GLU 60 C GLU 60 1_555 N NA NA . C NA 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? 
metalc ? metalc6 O O22 PPV . C PPV 163 1_555 N NA NA . C NA 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.805 ? 
metalc ? metalc7 O O31 PPV . C PPV 163 1_555 N NA NA . C NA 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? 
#
_chem_comp.formula           'Sm 3' 
_chem_comp.formula_weight    150.36 
_chem_comp.id                SM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SAMARIUM (III) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2O5W 
_atom_sites.fract_transf_matrix[1][1]    0.008038 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003781 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023305 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010202 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 SO4 A 1 164 164 SO4 SO4 . 
F 2 SO4 A 1 165 165 SO4 SO4 . 
G 3 SM A 1 170 170 SM SM . 
H 4 NA A 1 171 171 NA NA . 
I 5 PPV A 1 163 163 PPV PPV . 
J 2 SO4 B 1 164 164 SO4 SO4 . 
K 2 SO4 B 1 165 165 SO4 SO4 . 
L 3 SM B 1 170 170 SM SM . 
M 3 SM C 1 170 170 SM SM . 
N 4 NA C 1 171 171 NA NA . 
O 5 PPV C 1 163 163 PPV PPV . 
P 6 HOH A 1 172 8 HOH HOH . 
P 6 HOH A 2 173 12 HOH HOH . 
P 6 HOH A 3 174 18 HOH HOH . 
P 6 HOH A 4 175 19 HOH HOH . 
P 6 HOH A 5 176 20 HOH HOH . 
P 6 HOH A 6 177 26 HOH HOH . 
P 6 HOH A 7 178 27 HOH HOH . 
P 6 HOH A 8 179 29 HOH HOH . 
P 6 HOH A 9 180 30 HOH HOH . 
P 6 HOH A 10 181 34 HOH HOH . 
P 6 HOH A 11 182 38 HOH HOH . 
P 6 HOH A 12 183 43 HOH HOH . 
P 6 HOH A 13 184 45 HOH HOH . 
P 6 HOH A 14 185 46 HOH HOH . 
P 6 HOH A 15 186 48 HOH HOH . 
P 6 HOH A 16 187 54 HOH HOH . 
P 6 HOH A 17 188 55 HOH HOH . 
P 6 HOH A 18 189 62 HOH HOH . 
P 6 HOH A 19 190 64 HOH HOH . 
P 6 HOH A 20 191 70 HOH HOH . 
P 6 HOH A 21 192 76 HOH HOH . 
Q 6 HOH B 1 171 5 HOH HOH . 
Q 6 HOH B 2 172 6 HOH HOH . 
Q 6 HOH B 3 173 7 HOH HOH . 
Q 6 HOH B 4 174 13 HOH HOH . 
Q 6 HOH B 5 175 36 HOH HOH . 
Q 6 HOH B 6 176 37 HOH HOH . 
Q 6 HOH B 7 177 39 HOH HOH . 
Q 6 HOH B 8 178 41 HOH HOH . 
Q 6 HOH B 9 179 44 HOH HOH . 
Q 6 HOH B 10 180 51 HOH HOH . 
Q 6 HOH B 11 181 53 HOH HOH . 
Q 6 HOH B 12 182 56 HOH HOH . 
Q 6 HOH B 13 183 57 HOH HOH . 
Q 6 HOH B 14 184 58 HOH HOH . 
Q 6 HOH B 15 185 59 HOH HOH . 
Q 6 HOH B 16 186 66 HOH HOH . 
R 6 HOH C 1 172 4 HOH HOH . 
R 6 HOH C 2 173 10 HOH HOH . 
R 6 HOH C 3 174 11 HOH HOH . 
R 6 HOH C 4 175 14 HOH HOH . 
R 6 HOH C 5 176 15 HOH HOH . 
R 6 HOH C 6 177 17 HOH HOH . 
R 6 HOH C 7 178 24 HOH HOH . 
R 6 HOH C 8 179 25 HOH HOH . 
R 6 HOH C 9 180 31 HOH HOH . 
R 6 HOH C 10 181 32 HOH HOH . 
R 6 HOH C 11 182 33 HOH HOH . 
R 6 HOH C 12 183 42 HOH HOH . 
R 6 HOH C 13 184 52 HOH HOH . 
R 6 HOH C 14 185 65 HOH HOH . 
R 6 HOH C 15 186 69 HOH HOH . 
R 6 HOH C 16 187 72 HOH HOH . 
S 6 HOH D 1 151 3 HOH HOH . 
S 6 HOH D 2 152 9 HOH HOH . 
S 6 HOH D 3 153 16 HOH HOH . 
S 6 HOH D 4 154 21 HOH HOH . 
S 6 HOH D 5 155 23 HOH HOH . 
S 6 HOH D 6 156 28 HOH HOH . 
S 6 HOH D 7 157 35 HOH HOH . 
S 6 HOH D 8 158 40 HOH HOH . 
S 6 HOH D 9 159 47 HOH HOH . 
S 6 HOH D 10 160 49 HOH HOH . 
S 6 HOH D 11 161 50 HOH HOH . 
S 6 HOH D 12 162 60 HOH HOH . 
S 6 HOH D 13 163 61 HOH HOH . 
S 6 HOH D 14 164 63 HOH HOH . 
S 6 HOH D 15 165 67 HOH HOH . 
S 6 HOH D 16 166 73 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           SM 
_atom_site.label_atom_id         SM 
_atom_site.label_comp_id         SM 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         M 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -33.416 
_atom_site.Cartn_y               21.873 
_atom_site.Cartn_z               96.69 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        77.04 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          SM 
_atom_site.auth_comp_id          SM 
_atom_site.auth_seq_id           170 
_atom_site.auth_asym_id          C 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    82 
_model_server_stats.query_time_ms           440 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#